RNA–Protein interactions for RNA: ENST00000512275.5

RFC1-213, Transcript of replication factor C subunit 1, humanhuman

TSL 3

Gene RFC1, Length 841 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-213ENST00000512275 WBP1LQ9NX94 342 aa11.93□□□□□ -0.5
RFC1-213ENST00000512275 ATP1B4Q9UN42 357 aaPredicted RBP11.93□□□□□ -0.5
RFC1-213ENST00000512275 PROSER2Q86WR7 435 aaPredicted RBP11.92□□□□□ -0.5
RFC1-213ENST00000512275 POM121Q96HA1 1249 aa11.92□□□□□ -0.5
RFC1-213ENST00000512275 A0A0G2JS52 829 aa11.91□□□□□ -0.5
RFC1-213ENST00000512275 TMEM259Q4ZIN3 620 aa11.91□□□□□ -0.5
RFC1-213ENST00000512275 NYAP1Q6ZVC0 841 aa11.91□□□□□ -0.5
RFC1-213ENST00000512275 LRCH3Q96II8 777 aa11.91□□□□□ -0.5
RFC1-213ENST00000512275 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.91□□□□□ -0.5
RFC1-213ENST00000512275 MOXD2PA6NHM9 499 aa11.9□□□□□ -0.5
RFC1-213ENST00000512275 SMAPO00193 183 aa11.9□□□□□ -0.5
RFC1-213ENST00000512275 NUTM1Q86Y26 1132 aa11.9□□□□□ -0.5
RFC1-213ENST00000512275 SNRKQ9NRH2 765 aa11.9□□□□□ -0.5
RFC1-213ENST00000512275 ITGBL1O95965 494 aaPredicted RBP11.89□□□□□ -0.51
RFC1-213ENST00000512275 ARID3AQ99856 593 aa11.89□□□□□ -0.51
RFC1-213ENST00000512275 COG6Q9Y2V7 657 aa11.89□□□□□ -0.51
RFC1-213ENST00000512275 TSR3Q9UJK0 312 aaKnown RBP11.88□□□□□ -0.51
RFC1-213ENST00000512275 HPS5Q9UPZ3 1129 aa11.88□□□□□ -0.51
RFC1-213ENST00000512275 SOCS7O14512 581 aa11.86□□□□□ -0.51
RFC1-213ENST00000512275 LILRB3O75022 631 aa11.86□□□□□ -0.51
RFC1-213ENST00000512275 QPCTQ16769 361 aa11.86□□□□□ -0.51
RFC1-213ENST00000512275 RAD21O60216 631 aa11.85□□□□□ -0.51
RFC1-213ENST00000512275 RGS20O76081 388 aa11.85□□□□□ -0.51
RFC1-213ENST00000512275 NDUFV2P19404 249 aa11.85□□□□□ -0.51
RFC1-213ENST00000512275 CCDC82Q8N4S0 544 aa11.85□□□□□ -0.51
RFC1-213ENST00000512275 MTMR14Q8NCE2 650 aa11.85□□□□□ -0.51
RFC1-213ENST00000512275 PCDHB15Q9Y5E8 787 aa11.84□□□□□ -0.51
RFC1-213ENST00000512275 PRDM2Q13029 1718 aa11.83□□□□□ -0.52
RFC1-213ENST00000512275 KDM4AO75164 1064 aa11.83□□□□□ -0.52
RFC1-213ENST00000512275 GCGRP47871 477 aa11.83□□□□□ -0.52
RFC1-213ENST00000512275 RDH13Q8NBN7 331 aa11.83□□□□□ -0.52
RFC1-213ENST00000512275 USP46P62068 366 aa11.82□□□□□ -0.52
RFC1-213ENST00000512275 PRPF38BQ5VTL8 546 aaKnown RBP11.82□□□□□ -0.52
RFC1-213ENST00000512275 SAMD7Q7Z3H4 446 aa11.82□□□□□ -0.52
RFC1-213ENST00000512275 HOXA2O43364 376 aa11.81□□□□□ -0.52
RFC1-213ENST00000512275 SLC10A3P09131 477 aa11.81□□□□□ -0.52
RFC1-213ENST00000512275 CSPP1Q1MSJ5 1256 aa11.81□□□□□ -0.52
RFC1-213ENST00000512275 KCNC4Q03721 635 aa11.8□□□□□ -0.52
RFC1-213ENST00000512275 RTL5Q5HYW3 569 aaPredicted RBP11.8□□□□□ -0.52
RFC1-213ENST00000512275 PPP4CP60510 307 aa11.79□□□□□ -0.52
RFC1-213ENST00000512275 SWT1Q5T5J6 900 aaKnown RBP11.79□□□□□ -0.52
RFC1-213ENST00000512275 ZNF777Q9ULD5 760 aaPredicted RBP11.79□□□□□ -0.52
RFC1-213ENST00000512275 RSPH4AQ5TD94 716 aa11.78□□□□□ -0.52
RFC1-213ENST00000512275 CABLES1Q8TDN4 633 aa11.78□□□□□ -0.52
RFC1-213ENST00000512275 FDX1P10109 184 aa11.75□□□□□ -0.53
RFC1-213ENST00000512275 HRCP23327 699 aa11.75□□□□□ -0.53
RFC1-213ENST00000512275 ZBTB3Q9H5J0 574 aa11.75□□□□□ -0.53
RFC1-213ENST00000512275 GDPD2Q9HCC8 539 aa11.75□□□□□ -0.53
RFC1-213ENST00000512275 PCDHGC3Q9UN70 934 aa11.75□□□□□ -0.53
RFC1-213ENST00000512275 AP1G2O75843 785 aa11.74□□□□□ -0.53
RFC1-213ENST00000512275 USP17L8P0C7I0 530 aa11.74□□□□□ -0.53
RFC1-213ENST00000512275 NESP48681 1621 aa11.74□□□□□ -0.53
RFC1-213ENST00000512275 CFTRP13569 1480 aa11.73□□□□□ -0.53
RFC1-213ENST00000512275 LAMC3Q9Y6N6 1575 aa11.72□□□□□ -0.53
RFC1-213ENST00000512275 NUTM2BA6NNL0 878 aaPredicted RBP11.72□□□□□ -0.53
RFC1-213ENST00000512275 NUTM2EB1AL46 878 aaPredicted RBP11.72□□□□□ -0.53
RFC1-213ENST00000512275 NUTM2DQ5VT03 806 aaPredicted RBP11.72□□□□□ -0.53
RFC1-213ENST00000512275 NUTM2AQ8IVF1 878 aaPredicted RBP11.72□□□□□ -0.53
RFC1-213ENST00000512275 HLA-CQ95604 372 aa11.72□□□□□ -0.53
RFC1-213ENST00000512275 ABCC8Q09428 1581 aa11.71□□□□□ -0.53
RFC1-213ENST00000512275 CADPSQ9ULU8 1353 aa11.71□□□□□ -0.53
RFC1-213ENST00000512275 RNF40O75150 1001 aa11.71□□□□□ -0.53
RFC1-213ENST00000512275 HDGFP51858 240 aaKnown RBP11.71□□□□□ -0.53
RFC1-213ENST00000512275 GUCA2AQ02747 115 aa11.71□□□□□ -0.53
RFC1-213ENST00000512275 SERPINA10Q9UK55 444 aa11.71□□□□□ -0.53
RFC1-213ENST00000512275 ZNF330Q9Y3S2 320 aaPredicted RBP11.71□□□□□ -0.53
RFC1-213ENST00000512275 GJD4Q96KN9 370 aaPredicted RBP11.7□□□□□ -0.54
RFC1-213ENST00000512275 TBC1D2BQ9UPU7 963 aa11.7□□□□□ -0.54
RFC1-213ENST00000512275 TJAP1Q5JTD0 557 aa11.69□□□□□ -0.54
RFC1-213ENST00000512275 SLF2Q8IX21 1173 aa11.69□□□□□ -0.54
RFC1-213ENST00000512275 IRX2Q9BZI1 471 aaPredicted RBP11.69□□□□□ -0.54
RFC1-213ENST00000512275 CCDC97Q96F63 343 aaPredicted RBP11.68□□□□□ -0.54
RFC1-213ENST00000512275 KIF21AQ7Z4S6 1674 aa11.68□□□□□ -0.54
RFC1-213ENST00000512275 MTMR2Q13614 643 aa11.67□□□□□ -0.54
RFC1-213ENST00000512275 GPR37L1O60883 481 aa11.66□□□□□ -0.54
RFC1-213ENST00000512275 ABL2P42684 1182 aa11.66□□□□□ -0.54
RFC1-213ENST00000512275 APLP1P51693 650 aa11.66□□□□□ -0.54
RFC1-213ENST00000512275 FUT2Q10981 343 aa11.66□□□□□ -0.54
RFC1-213ENST00000512275 MTRQ99707 1265 aa11.66□□□□□ -0.54
RFC1-213ENST00000512275 PRM3Q9NNZ6 103 aa11.66□□□□□ -0.54
RFC1-213ENST00000512275 CFHP08603 1231 aa11.65□□□□□ -0.54
RFC1-213ENST00000512275 SLC4A3P48751 1232 aa11.65□□□□□ -0.54
RFC1-213ENST00000512275 HMX1Q9NP08 348 aaPredicted RBP11.65□□□□□ -0.54
RFC1-213ENST00000512275 CTDSPL2Q05D32 466 aa11.64□□□□□ -0.55
RFC1-213ENST00000512275 WWC1Q8IX03 1113 aa11.64□□□□□ -0.55
RFC1-213ENST00000512275 TRIM34Q9BYJ4 488 aa11.64□□□□□ -0.55
RFC1-213ENST00000512275 NDUFB9Q9Y6M9 179 aa11.64□□□□□ -0.55
RFC1-213ENST00000512275 CFAP99D6REC4 459 aa11.63□□□□□ -0.55
RFC1-213ENST00000512275 IRF5Q13568 498 aa11.63□□□□□ -0.55
RFC1-213ENST00000512275 IL21Q9HBE4 155 aa11.63□□□□□ -0.55
RFC1-213ENST00000512275 FANCD2Q9BXW9 1451 aa11.63□□□□□ -0.55
RFC1-213ENST00000512275 POM121CA8CG34 1229 aa11.62□□□□□ -0.55
RFC1-213ENST00000512275 GRIPAP1Q4V328 841 aa11.62□□□□□ -0.55
RFC1-213ENST00000512275 SYNJ1O43426 1573 aa11.62□□□□□ -0.55
RFC1-213ENST00000512275 ATP6V1AP38606 617 aa11.61□□□□□ -0.55
RFC1-213ENST00000512275 TRIM26Q12899 539 aaPredicted RBP11.61□□□□□ -0.55
RFC1-213ENST00000512275 HELBQ8NG08 1087 aaPredicted RBP11.61□□□□□ -0.55
RFC1-213ENST00000512275 ZNF516Q92618 1163 aa11.61□□□□□ -0.55
RFC1-213ENST00000512275 NECTIN2Q92692 538 aa11.61□□□□□ -0.55
RFC1-213ENST00000512275 CEP164Q9UPV0 1460 aa11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms