RNA–Protein interactions for RNA: ENST00000511817.1

XRCC4-205, Transcript of X-ray repair cross complementing 4, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene XRCC4, Length 1,636 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC4-205ENST00000511817 THAP11Q96EK4 314 aa7.12□□□□□ -1.27
XRCC4-205ENST00000511817 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP7.11□□□□□ -1.27
XRCC4-205ENST00000511817 FAM160A2Q8N612 972 aaPredicted RBP7.11□□□□□ -1.27
XRCC4-205ENST00000511817 J3QL48 77 aa7.1□□□□□ -1.27
XRCC4-205ENST00000511817 ADAM23O75077 832 aa7.1□□□□□ -1.27
XRCC4-205ENST00000511817 DCAF8L2P0C7V8 631 aa7.1□□□□□ -1.27
XRCC4-205ENST00000511817 PTGDRQ13258 359 aa7.1□□□□□ -1.27
XRCC4-205ENST00000511817 RSPH4AQ5TD94 716 aa7.09□□□□□ -1.27
XRCC4-205ENST00000511817 HPS1Q92902 700 aa7.09□□□□□ -1.27
XRCC4-205ENST00000511817 MORN1Q5T089 497 aa7.09□□□□□ -1.28
XRCC4-205ENST00000511817 MRGPRX2Q96LB1 330 aa7.08□□□□□ -1.28
XRCC4-205ENST00000511817 WDR70Q9NW82 654 aa7.08□□□□□ -1.28
XRCC4-205ENST00000511817 FMNL1O95466 1100 aaPredicted RBP7.07□□□□□ -1.28
XRCC4-205ENST00000511817 FAM161AQ3B820 660 aa7.06□□□□□ -1.28
XRCC4-205ENST00000511817 SALL2Q9Y467 1007 aaPredicted RBP7.06□□□□□ -1.28
XRCC4-205ENST00000511817 TRIM32Q13049 653 aa7.05□□□□□ -1.28
XRCC4-205ENST00000511817 REPIN1Q9BWE0 567 aaKnown RBP7.05□□□□□ -1.28
XRCC4-205ENST00000511817 PRDM9Q9NQV7 894 aa7.05□□□□□ -1.28
XRCC4-205ENST00000511817 MSS51Q4VC12 460 aa7.04□□□□□ -1.28
XRCC4-205ENST00000511817 ADAMTS8Q9UP79 889 aa7.04□□□□□ -1.28
XRCC4-205ENST00000511817 BTBD11A6QL63 1104 aa7.03□□□□□ -1.28
XRCC4-205ENST00000511817 ATP6V1AP38606 617 aa7.03□□□□□ -1.28
XRCC4-205ENST00000511817 BRICD5Q6PL45 260 aa7.03□□□□□ -1.28
XRCC4-205ENST00000511817 KRTAP4-12Q9BQ66 201 aa7.03□□□□□ -1.28
XRCC4-205ENST00000511817 SLC27A5Q9Y2P5 690 aa7.03□□□□□ -1.28
XRCC4-205ENST00000511817 PXYLP1Q8TE99 480 aa7.02□□□□□ -1.29
XRCC4-205ENST00000511817 KRTAP4-8A0A0G2JLE6 195 aa7.01□□□□□ -1.29
XRCC4-205ENST00000511817 OATP04181 439 aa7.01□□□□□ -1.29
XRCC4-205ENST00000511817 FUT2Q10981 343 aa7.01□□□□□ -1.29
XRCC4-205ENST00000511817 TRIM46Q7Z4K8 759 aa7.01□□□□□ -1.29
XRCC4-205ENST00000511817 Q8N3U1 123 aa7.01□□□□□ -1.29
XRCC4-205ENST00000511817 KRTAP9-9Q9BYP9 154 aa7.01□□□□□ -1.29
XRCC4-205ENST00000511817 KRTAP9-4Q9BYQ2 154 aa7.01□□□□□ -1.29
XRCC4-205ENST00000511817 MLLT3P42568 568 aaPredicted RBP7□□□□□ -1.29
XRCC4-205ENST00000511817 KANK3Q6NY19 840 aa7□□□□□ -1.29
XRCC4-205ENST00000511817 BBXQ8WY36 941 aaPredicted RBP6.99□□□□□ -1.29
XRCC4-205ENST00000511817 FECHP22830 423 aa6.98□□□□□ -1.29
XRCC4-205ENST00000511817 MMP16P51512 607 aa6.98□□□□□ -1.29
XRCC4-205ENST00000511817 RC3H1Q5TC82 1133 aaKnown RBP6.98□□□□□ -1.29
XRCC4-205ENST00000511817 BMP1P13497 986 aa6.97□□□□□ -1.29
XRCC4-205ENST00000511817 IRS1P35568 1242 aa6.97□□□□□ -1.29
XRCC4-205ENST00000511817 RDH13Q8NBN7 331 aa6.97□□□□□ -1.29
XRCC4-205ENST00000511817 NUTM2FA1L443 756 aa6.96□□□□□ -1.3
XRCC4-205ENST00000511817 WNT7BP56706 349 aa6.96□□□□□ -1.3
XRCC4-205ENST00000511817 RNF19BQ6ZMZ0 732 aa6.96□□□□□ -1.3
XRCC4-205ENST00000511817 DAXXQ9UER7 740 aaPredicted RBP6.96□□□□□ -1.3
XRCC4-205ENST00000511817 FCHSD2O94868 740 aa6.95□□□□□ -1.3
XRCC4-205ENST00000511817 SKOR1P84550 965 aa6.95□□□□□ -1.3
XRCC4-205ENST00000511817 METTL3Q86U44 580 aaKnown RBP6.95□□□□□ -1.3
XRCC4-205ENST00000511817 CAPN5O15484 640 aaPredicted RBP6.94□□□□□ -1.3
XRCC4-205ENST00000511817 ALDH1A1P00352 501 aa6.94□□□□□ -1.3
XRCC4-205ENST00000511817 GCGRP47871 477 aa6.94□□□□□ -1.3
XRCC4-205ENST00000511817 MSTNO14793 375 aa6.94□□□□□ -1.3
XRCC4-205ENST00000511817 SPRYD3Q8NCJ5 442 aa6.94□□□□□ -1.3
XRCC4-205ENST00000511817 DDX11L8A8MPP1 907 aa6.91□□□□□ -1.3
XRCC4-205ENST00000511817 DXOO77932 396 aaKnown RBP6.91□□□□□ -1.3
XRCC4-205ENST00000511817 Q3C1V9 767 aa6.91□□□□□ -1.3
XRCC4-205ENST00000511817 ARHGEF1Q92888 912 aaKnown RBP6.91□□□□□ -1.3
XRCC4-205ENST00000511817 SIAH2O43255 324 aa6.9□□□□□ -1.3
XRCC4-205ENST00000511817 GRIPAP1Q4V328 841 aa6.9□□□□□ -1.3
XRCC4-205ENST00000511817 ZFP42Q96MM3 310 aa6.9□□□□□ -1.3
XRCC4-205ENST00000511817 SULF1Q8IWU6 871 aa6.88□□□□□ -1.31
XRCC4-205ENST00000511817 SPOCK3Q9BQ16 436 aa6.88□□□□□ -1.31
XRCC4-205ENST00000511817 WASF2Q9Y6W5 498 aa6.88□□□□□ -1.31
XRCC4-205ENST00000511817 K7ELQ4 463 aaPredicted RBP6.87□□□□□ -1.31
XRCC4-205ENST00000511817 CCDC24Q8N4L8 307 aa6.87□□□□□ -1.31
XRCC4-205ENST00000511817 USB1Q9BQ65 265 aaKnown RBP6.87□□□□□ -1.31
XRCC4-205ENST00000511817 HIC1Q14526 733 aa6.87□□□□□ -1.31
XRCC4-205ENST00000511817 ZNF385CQ66K41 422 aaPredicted RBP6.86□□□□□ -1.31
XRCC4-205ENST00000511817 SCARF2Q96GP6 870 aaPredicted RBP6.86□□□□□ -1.31
XRCC4-205ENST00000511817 KRT76Q01546 638 aa6.85□□□□□ -1.31
XRCC4-205ENST00000511817 PLA2G4EQ3MJ16 856 aa6.84□□□□□ -1.31
XRCC4-205ENST00000511817 EHBP1Q8NDI1 1231 aa6.84□□□□□ -1.31
XRCC4-205ENST00000511817 MARSP56192 900 aaKnown RBP6.83□□□□□ -1.32
XRCC4-205ENST00000511817 SCARF1Q14162 830 aa6.83□□□□□ -1.32
XRCC4-205ENST00000511817 SVOPQ8N4V2 548 aa6.83□□□□□ -1.32
XRCC4-205ENST00000511817 ARHGEF15O94989 841 aa6.83□□□□□ -1.32
XRCC4-205ENST00000511817 MRPL14Q6P1L8 145 aaKnown RBP6.83□□□□□ -1.32
XRCC4-205ENST00000511817 PROCP04070 461 aa6.82□□□□□ -1.32
XRCC4-205ENST00000511817 ZBTB4Q9P1Z0 1013 aaPredicted RBP6.82□□□□□ -1.32
XRCC4-205ENST00000511817 SOBPA7XYQ1 873 aa6.81□□□□□ -1.32
XRCC4-205ENST00000511817 PPFIA3O75145 1194 aa6.81□□□□□ -1.32
XRCC4-205ENST00000511817 CNTNAP3BQ96NU0 1288 aa6.81□□□□□ -1.32
XRCC4-205ENST00000511817 CNTNAP3Q9BZ76 1288 aa6.81□□□□□ -1.32
XRCC4-205ENST00000511817 NLRP7Q8WX94 980 aa6.8□□□□□ -1.32
XRCC4-205ENST00000511817 PURBQ96QR8 312 aaKnown RBP6.8□□□□□ -1.32
XRCC4-205ENST00000511817 KRTAP4-7Q9BYR0 210 aa6.8□□□□□ -1.32
XRCC4-205ENST00000511817 GALNT6Q8NCL4 622 aa6.79□□□□□ -1.32
XRCC4-205ENST00000511817 JUNDP17535 347 aa6.79□□□□□ -1.32
XRCC4-205ENST00000511817 GNPATO15228 680 aa6.78□□□□□ -1.32
XRCC4-205ENST00000511817 ITGB2P05107 769 aa6.78□□□□□ -1.32
XRCC4-205ENST00000511817 KCNV2Q8TDN2 545 aa6.78□□□□□ -1.32
XRCC4-205ENST00000511817 SH3BP2P78314 561 aa6.77□□□□□ -1.33
XRCC4-205ENST00000511817 PTCRAQ6ISU1 281 aaPredicted RBP6.77□□□□□ -1.33
XRCC4-205ENST00000511817 MPNDQ8N594 471 aa6.76□□□□□ -1.33
XRCC4-205ENST00000511817 PHOX2BQ99453 314 aa6.76□□□□□ -1.33
XRCC4-205ENST00000511817 TIMP2P16035 220 aa6.76□□□□□ -1.33
XRCC4-205ENST00000511817 NNTQ13423 1086 aa6.76□□□□□ -1.33
XRCC4-205ENST00000511817 KRTAP19-1Q8IUB9 90 aa6.76□□□□□ -1.33
XRCC4-205ENST00000511817 PLEKHG3A1L390 1219 aa6.75□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 8.3 ms