RNA–Protein interactions for RNA: ENST00000511333.5

MATR3-217, Transcript of matrin 3, humanhuman

TSL 5

Gene MATR3, Length 558 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MATR3-217ENST00000511333 ATP6V1AP38606 617 aa10.08□□□□□ -0.8
MATR3-217ENST00000511333 FUT2Q10981 343 aa10.08□□□□□ -0.8
MATR3-217ENST00000511333 TRIM46Q7Z4K8 759 aa10.08□□□□□ -0.8
MATR3-217ENST00000511333 VSIG8P0DPA2 414 aa10.07□□□□□ -0.8
MATR3-217ENST00000511333 MMP16P51512 607 aa10.07□□□□□ -0.8
MATR3-217ENST00000511333 WDR70Q9NW82 654 aa10.07□□□□□ -0.8
MATR3-217ENST00000511333 OATP04181 439 aa10.06□□□□□ -0.8
MATR3-217ENST00000511333 MLLT3P42568 568 aaPredicted RBP10.06□□□□□ -0.8
MATR3-217ENST00000511333 KCTD17Q8N5Z5 321 aa10.06□□□□□ -0.8
MATR3-217ENST00000511333 DCAF8L2P0C7V8 631 aa10.05□□□□□ -0.8
MATR3-217ENST00000511333 VEGFBP49765 207 aa10.05□□□□□ -0.8
MATR3-217ENST00000511333 METTL3Q86U44 580 aaKnown RBP10.03□□□□□ -0.8
MATR3-217ENST00000511333 WNT7BP56706 349 aa10.02□□□□□ -0.81
MATR3-217ENST00000511333 RNF19BQ6ZMZ0 732 aa10.02□□□□□ -0.81
MATR3-217ENST00000511333 BBXQ8WY36 941 aaPredicted RBP10.02□□□□□ -0.81
MATR3-217ENST00000511333 BMP1P13497 986 aa10.01□□□□□ -0.81
MATR3-217ENST00000511333 SKOR1P84550 965 aa10.01□□□□□ -0.81
MATR3-217ENST00000511333 RC3H1Q5TC82 1133 aaKnown RBP10□□□□□ -0.81
MATR3-217ENST00000511333 FECHP22830 423 aa9.99□□□□□ -0.81
MATR3-217ENST00000511333 DAXXQ9UER7 740 aaPredicted RBP9.99□□□□□ -0.81
MATR3-217ENST00000511333 DXOO77932 396 aaKnown RBP9.98□□□□□ -0.81
MATR3-217ENST00000511333 FCHSD2O94868 740 aa9.98□□□□□ -0.81
MATR3-217ENST00000511333 GCGRP47871 477 aa9.98□□□□□ -0.81
MATR3-217ENST00000511333 RDH13Q8NBN7 331 aa9.97□□□□□ -0.81
MATR3-217ENST00000511333 SIAH2O43255 324 aa9.95□□□□□ -0.82
MATR3-217ENST00000511333 TMEM151AQ8N4L1 468 aa9.95□□□□□ -0.82
MATR3-217ENST00000511333 CAPN5O15484 640 aaPredicted RBP9.94□□□□□ -0.82
MATR3-217ENST00000511333 ALDH1A1P00352 501 aa9.94□□□□□ -0.82
MATR3-217ENST00000511333 NUTM2FA1L443 756 aa9.93□□□□□ -0.82
MATR3-217ENST00000511333 ARHGEF1Q92888 912 aaKnown RBP9.93□□□□□ -0.82
MATR3-217ENST00000511333 RASSF7Q02833 373 aa9.92□□□□□ -0.82
MATR3-217ENST00000511333 GDF11O95390 407 aa9.91□□□□□ -0.82
MATR3-217ENST00000511333 Q3C1V9 767 aa9.91□□□□□ -0.82
MATR3-217ENST00000511333 SPRYD3Q8NCJ5 442 aa9.91□□□□□ -0.82
MATR3-217ENST00000511333 ZFP42Q96MM3 310 aa9.91□□□□□ -0.82
MATR3-217ENST00000511333 DDX11L8A8MPP1 907 aa9.9□□□□□ -0.82
MATR3-217ENST00000511333 RNF225M0QZC1 329 aaPredicted RBP9.89□□□□□ -0.83
MATR3-217ENST00000511333 GRIPAP1Q4V328 841 aa9.89□□□□□ -0.83
MATR3-217ENST00000511333 SULF1Q8IWU6 871 aa9.89□□□□□ -0.83
MATR3-217ENST00000511333 HIC1Q14526 733 aa9.88□□□□□ -0.83
MATR3-217ENST00000511333 USB1Q9BQ65 265 aaKnown RBP9.87□□□□□ -0.83
MATR3-217ENST00000511333 XP32Q5T750 250 aa9.86□□□□□ -0.83
MATR3-217ENST00000511333 IGHA1P01876 353 aa9.83□□□□□ -0.84
MATR3-217ENST00000511333 KRTAP4-8Q9BYQ9 185 aa9.83□□□□□ -0.84
MATR3-217ENST00000511333 WASF2Q9Y6W5 498 aa9.83□□□□□ -0.84
MATR3-217ENST00000511333 DNMT3AQ9Y6K1 912 aaPredicted RBP9.82□□□□□ -0.84
MATR3-217ENST00000511333 MRPL14Q6P1L8 145 aaKnown RBP9.81□□□□□ -0.84
MATR3-217ENST00000511333 EHBP1Q8NDI1 1231 aa9.8□□□□□ -0.84
MATR3-217ENST00000511333 CCDC24Q8N4L8 307 aa9.79□□□□□ -0.84
MATR3-217ENST00000511333 ADAMTS8Q9UP79 889 aa9.79□□□□□ -0.84
MATR3-217ENST00000511333 KCNV2Q8TDN2 545 aa9.78□□□□□ -0.84
MATR3-217ENST00000511333 SCARF1Q14162 830 aa9.76□□□□□ -0.85
MATR3-217ENST00000511333 MPNDQ8N594 471 aa9.76□□□□□ -0.85
MATR3-217ENST00000511333 SOBPA7XYQ1 873 aa9.75□□□□□ -0.85
MATR3-217ENST00000511333 JUNDP17535 347 aa9.75□□□□□ -0.85
MATR3-217ENST00000511333 FOXK2Q01167 660 aa9.75□□□□□ -0.85
MATR3-217ENST00000511333 KRT76Q01546 638 aa9.75□□□□□ -0.85
MATR3-217ENST00000511333 NLRP7Q8WX94 980 aa9.75□□□□□ -0.85
MATR3-217ENST00000511333 PHOX2BQ99453 314 aa9.75□□□□□ -0.85
MATR3-217ENST00000511333 GNPATO15228 680 aa9.74□□□□□ -0.85
MATR3-217ENST00000511333 GPR37O15354 613 aa9.74□□□□□ -0.85
MATR3-217ENST00000511333 PPFIA3O75145 1194 aa9.74□□□□□ -0.85
MATR3-217ENST00000511333 PURBQ96QR8 312 aaKnown RBP9.74□□□□□ -0.85
MATR3-217ENST00000511333 TIMP2P16035 220 aa9.73□□□□□ -0.85
MATR3-217ENST00000511333 GPAT2Q6NUI2 795 aa9.73□□□□□ -0.85
MATR3-217ENST00000511333 CD46P15529 392 aa9.72□□□□□ -0.85
MATR3-217ENST00000511333 SH3BP2P78314 561 aa9.72□□□□□ -0.85
MATR3-217ENST00000511333 PTCRAQ6ISU1 281 aaPredicted RBP9.72□□□□□ -0.85
MATR3-217ENST00000511333 KLF16Q9BXK1 252 aaPredicted RBP9.72□□□□□ -0.85
MATR3-217ENST00000511333 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.72□□□□□ -0.85
MATR3-217ENST00000511333 ADH1CP00326 375 aa9.7□□□□□ -0.86
MATR3-217ENST00000511333 NNTQ13423 1086 aa9.7□□□□□ -0.86
MATR3-217ENST00000511333 TLL2Q9Y6L7 1015 aa9.7□□□□□ -0.86
MATR3-217ENST00000511333 USP46P62068 366 aa9.69□□□□□ -0.86
MATR3-217ENST00000511333 NUDT12Q9BQG2 462 aa9.69□□□□□ -0.86
MATR3-217ENST00000511333 KDM4AO75164 1064 aa9.68□□□□□ -0.86
MATR3-217ENST00000511333 ZNF385CQ66K41 422 aaPredicted RBP9.68□□□□□ -0.86
MATR3-217ENST00000511333 PLEKHG3A1L390 1219 aa9.67□□□□□ -0.86
MATR3-217ENST00000511333 KANK3Q6NY19 840 aa9.67□□□□□ -0.86
MATR3-217ENST00000511333 HLA-CQ95604 372 aa9.66□□□□□ -0.86
MATR3-217ENST00000511333 WDR4P57081 412 aaKnown RBP9.65□□□□□ -0.86
MATR3-217ENST00000511333 KRTAP9-1A8MXZ3 250 aaPredicted RBP9.64□□□□□ -0.87
MATR3-217ENST00000511333 HOXA2O43364 376 aa9.64□□□□□ -0.87
MATR3-217ENST00000511333 MAN1A2O60476 641 aa9.64□□□□□ -0.87
MATR3-217ENST00000511333 ADAM23O75077 832 aa9.64□□□□□ -0.87
MATR3-217ENST00000511333 ARHGEF15O94989 841 aa9.64□□□□□ -0.87
MATR3-217ENST00000511333 GPR161Q8N6U8 529 aaKnown RBP9.64□□□□□ -0.87
MATR3-217ENST00000511333 KRTAP9-2Q9BYQ4 174 aa9.64□□□□□ -0.87
MATR3-217ENST00000511333 VARSP26640 1264 aaKnown RBP9.63□□□□□ -0.87
MATR3-217ENST00000511333 IRS1P35568 1242 aa9.63□□□□□ -0.87
MATR3-217ENST00000511333 CNTNAP3BQ96NU0 1288 aa9.63□□□□□ -0.87
MATR3-217ENST00000511333 CNTNAP3Q9BZ76 1288 aa9.63□□□□□ -0.87
MATR3-217ENST00000511333 PAXIP1Q6ZW49 1069 aaPredicted RBP9.62□□□□□ -0.87
MATR3-217ENST00000511333 RETREG3Q86VR2 466 aa9.62□□□□□ -0.87
MATR3-217ENST00000511333 SEMA3EO15041 775 aa9.61□□□□□ -0.87
MATR3-217ENST00000511333 SLURP2P0DP57 97 aa9.61□□□□□ -0.87
MATR3-217ENST00000511333 CCNYL3P0C7X3 344 aa9.6□□□□□ -0.87
MATR3-217ENST00000511333 NANOS1Q8WY41 292 aaKnown RBP9.6□□□□□ -0.87
MATR3-217ENST00000511333 SVOPQ8N4V2 548 aa9.59□□□□□ -0.87
MATR3-217ENST00000511333 CFAP44Q96MT7 982 aa9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms