RNA–Protein interactions for RNA: ENST00000511175.1

SUB1-208, Transcript of SUB1 homolog, transcriptional regulator, humanhuman

TSL 2

Gene SUB1, Length 636 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUB1-208ENST00000511175 C11orf95C9JLR9 678 aaPredicted RBP8.58□□□□□ -1.04
SUB1-208ENST00000511175 CD46P15529 392 aa8.58□□□□□ -1.04
SUB1-208ENST00000511175 SMPD1P17405 629 aa8.58□□□□□ -1.04
SUB1-208ENST00000511175 HLA-CQ95604 372 aa8.58□□□□□ -1.04
SUB1-208ENST00000511175 WNT7AO00755 349 aa8.57□□□□□ -1.04
SUB1-208ENST00000511175 SMCPP49901 116 aaPredicted RBP8.57□□□□□ -1.04
SUB1-208ENST00000511175 MMP16P51512 607 aa8.57□□□□□ -1.04
SUB1-208ENST00000511175 TRIM32Q13049 653 aa8.57□□□□□ -1.04
SUB1-208ENST00000511175 CTC1Q2NKJ3 1217 aa8.57□□□□□ -1.04
SUB1-208ENST00000511175 GRIPAP1Q4V328 841 aa8.57□□□□□ -1.04
SUB1-208ENST00000511175 J3QL48 77 aa8.56□□□□□ -1.04
SUB1-208ENST00000511175 MRGPRX2Q96LB1 330 aa8.56□□□□□ -1.04
SUB1-208ENST00000511175 Q3C1V9 767 aa8.55□□□□□ -1.04
SUB1-208ENST00000511175 SNIP1Q8TAD8 396 aaKnown RBP8.55□□□□□ -1.04
SUB1-208ENST00000511175 KDM4AO75164 1064 aa8.54□□□□□ -1.04
SUB1-208ENST00000511175 MDM2Q00987 491 aaPredicted RBP8.54□□□□□ -1.04
SUB1-208ENST00000511175 USB1Q9BQ65 265 aaKnown RBP8.54□□□□□ -1.04
SUB1-208ENST00000511175 WFS1O76024 890 aa8.53□□□□□ -1.04
SUB1-208ENST00000511175 DXOO77932 396 aaKnown RBP8.53□□□□□ -1.04
SUB1-208ENST00000511175 KDM2AQ9Y2K7 1162 aa8.53□□□□□ -1.04
SUB1-208ENST00000511175 SNRPBP14678 240 aaKnown RBP8.52□□□□□ -1.05
SUB1-208ENST00000511175 NFX1Q12986 1120 aaKnown RBP8.52□□□□□ -1.05
SUB1-208ENST00000511175 MAP2K5Q13163 448 aa8.52□□□□□ -1.05
SUB1-208ENST00000511175 CCDC24Q8N4L8 307 aa8.52□□□□□ -1.05
SUB1-208ENST00000511175 ATP13A2Q9NQ11 1180 aa8.52□□□□□ -1.05
SUB1-208ENST00000511175 IRF6O14896 467 aa8.51□□□□□ -1.05
SUB1-208ENST00000511175 SKOR1P84550 965 aa8.51□□□□□ -1.05
SUB1-208ENST00000511175 GUCA2AQ02747 115 aa8.51□□□□□ -1.05
SUB1-208ENST00000511175 HPS1Q92902 700 aa8.51□□□□□ -1.05
SUB1-208ENST00000511175 HAP1P54257 671 aaPredicted RBP8.5□□□□□ -1.05
SUB1-208ENST00000511175 LCE2CQ5TA81 110 aa8.5□□□□□ -1.05
SUB1-208ENST00000511175 SYMPKQ92797 1274 aaKnown RBP8.5□□□□□ -1.05
SUB1-208ENST00000511175 HOXA2O43364 376 aa8.49□□□□□ -1.05
SUB1-208ENST00000511175 RC3H1Q5TC82 1133 aaKnown RBP8.49□□□□□ -1.05
SUB1-208ENST00000511175 USP46P62068 366 aa8.46□□□□□ -1.06
SUB1-208ENST00000511175 MINK1Q8N4C8 1332 aaPredicted RBP8.46□□□□□ -1.06
SUB1-208ENST00000511175 PTCRAQ6ISU1 281 aaPredicted RBP8.45□□□□□ -1.06
SUB1-208ENST00000511175 CCDC102AQ96A19 550 aa8.45□□□□□ -1.06
SUB1-208ENST00000511175 TRIM47Q96LD4 638 aa8.45□□□□□ -1.06
SUB1-208ENST00000511175 REPIN1Q9BWE0 567 aaKnown RBP8.45□□□□□ -1.06
SUB1-208ENST00000511175 JUNDP17535 347 aa8.44□□□□□ -1.06
SUB1-208ENST00000511175 WNT7BP56706 349 aa8.44□□□□□ -1.06
SUB1-208ENST00000511175 TERTO14746 1132 aaKnown RBP8.43□□□□□ -1.06
SUB1-208ENST00000511175 ALDH1A1P00352 501 aa8.43□□□□□ -1.06
SUB1-208ENST00000511175 FAM217BQ9NTX9 383 aaPredicted RBP8.43□□□□□ -1.06
SUB1-208ENST00000511175 WIPF1O43516 503 aa8.42□□□□□ -1.06
SUB1-208ENST00000511175 SENP2Q9HC62 589 aa8.42□□□□□ -1.06
SUB1-208ENST00000511175 GPCPD1Q9NPB8 672 aa8.42□□□□□ -1.06
SUB1-208ENST00000511175 PCDHGC3Q9UN70 934 aa8.41□□□□□ -1.06
SUB1-208ENST00000511175 SIAH2O43255 324 aa8.4□□□□□ -1.06
SUB1-208ENST00000511175 NUDT12Q9BQG2 462 aa8.4□□□□□ -1.06
SUB1-208ENST00000511175 CLCN1P35523 988 aa8.39□□□□□ -1.07
SUB1-208ENST00000511175 RETREG3Q86VR2 466 aa8.39□□□□□ -1.07
SUB1-208ENST00000511175 NUTM1Q86Y26 1132 aa8.39□□□□□ -1.07
SUB1-208ENST00000511175 BMP1P13497 986 aa8.38□□□□□ -1.07
SUB1-208ENST00000511175 KIFC2Q96AC6 838 aa8.38□□□□□ -1.07
SUB1-208ENST00000511175 STK17AQ9UEE5 414 aa8.38□□□□□ -1.07
SUB1-208ENST00000511175 FDX1P10109 184 aa8.37□□□□□ -1.07
SUB1-208ENST00000511175 TRIM46Q7Z4K8 759 aa8.37□□□□□ -1.07
SUB1-208ENST00000511175 EHBP1Q8NDI1 1231 aa8.37□□□□□ -1.07
SUB1-208ENST00000511175 C6orf229H3BNL8 230 aa8.36□□□□□ -1.07
SUB1-208ENST00000511175 TULP1O00294 542 aaPredicted RBP8.36□□□□□ -1.07
SUB1-208ENST00000511175 SH3BP2P78314 561 aa8.36□□□□□ -1.07
SUB1-208ENST00000511175 INSM1Q01101 510 aaPredicted RBP8.36□□□□□ -1.07
SUB1-208ENST00000511175 NDUFV2P19404 249 aa8.35□□□□□ -1.07
SUB1-208ENST00000511175 MS4A1P11836 297 aa8.34□□□□□ -1.07
SUB1-208ENST00000511175 LINC01559Q495D7 138 aa8.34□□□□□ -1.07
SUB1-208ENST00000511175 KRI1Q8N9T8 703 aaKnown RBP8.34□□□□□ -1.07
SUB1-208ENST00000511175 WASF2Q9Y6W5 498 aa8.34□□□□□ -1.07
SUB1-208ENST00000511175 CAPN5O15484 640 aaPredicted RBP8.33□□□□□ -1.08
SUB1-208ENST00000511175 CCNYL3P0C7X3 344 aa8.33□□□□□ -1.08
SUB1-208ENST00000511175 SSTR3P32745 418 aaPredicted RBP8.33□□□□□ -1.08
SUB1-208ENST00000511175 SPIRE2Q8WWL2 714 aa8.33□□□□□ -1.08
SUB1-208ENST00000511175 MOXD2PA6NHM9 499 aa8.32□□□□□ -1.08
SUB1-208ENST00000511175 BAP1Q92560 729 aa8.32□□□□□ -1.08
SUB1-208ENST00000511175 VEGFBP49765 207 aa8.31□□□□□ -1.08
SUB1-208ENST00000511175 DHX30Q7L2E3 1194 aaKnown RBP eCLIP8.31□□□□□ -1.08
SUB1-208ENST00000511175 UNC93B1Q9H1C4 597 aa8.31□□□□□ -1.08
SUB1-208ENST00000511175 EVA1BQ9NVM1 165 aa8.31□□□□□ -1.08
SUB1-208ENST00000511175 NXF1Q9UBU9 619 aaKnown RBP8.31□□□□□ -1.08
SUB1-208ENST00000511175 TLL2Q9Y6L7 1015 aa8.31□□□□□ -1.08
SUB1-208ENST00000511175 PTPRNQ16849 979 aa8.3□□□□□ -1.08
SUB1-208ENST00000511175 PRR7Q8TB68 274 aa8.3□□□□□ -1.08
SUB1-208ENST00000511175 GMPRP36959 345 aa8.29□□□□□ -1.08
SUB1-208ENST00000511175 SLC16A10Q8TF71 515 aa8.29□□□□□ -1.08
SUB1-208ENST00000511175 KCNH2Q12809 1159 aa8.28□□□□□ -1.08
SUB1-208ENST00000511175 VSIG10Q8N0Z9 540 aa8.28□□□□□ -1.08
SUB1-208ENST00000511175 LORP23490 312 aaPredicted RBP8.27□□□□□ -1.09
SUB1-208ENST00000511175 ZNF511Q8NB15 262 aa8.27□□□□□ -1.09
SUB1-208ENST00000511175 ZFP42Q96MM3 310 aa8.27□□□□□ -1.09
SUB1-208ENST00000511175 ERBB4Q15303 1308 aa8.26□□□□□ -1.09
SUB1-208ENST00000511175 NNTQ13423 1086 aa8.25□□□□□ -1.09
SUB1-208ENST00000511175 MTMR2Q13614 643 aa8.25□□□□□ -1.09
SUB1-208ENST00000511175 TTLL12Q14166 644 aaPredicted RBP8.25□□□□□ -1.09
SUB1-208ENST00000511175 H3BM21 787 aa8.24□□□□□ -1.09
SUB1-208ENST00000511175 VARSP26640 1264 aaKnown RBP8.24□□□□□ -1.09
SUB1-208ENST00000511175 GIGYF2Q6Y7W6 1299 aaKnown RBP8.24□□□□□ -1.09
SUB1-208ENST00000511175 BARGINQ6ZT62 677 aa8.24□□□□□ -1.09
SUB1-208ENST00000511175 SOBPA7XYQ1 873 aa8.23□□□□□ -1.09
SUB1-208ENST00000511175 DESI1Q6ICB0 168 aa8.23□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 83.4 ms