RNA–Protein interactions for RNA: ENST00000509995.5

SNF8-207, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 3

Gene SNF8, Length 560 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-207ENST00000509995 UNC5CLQ8IV45 518 aa17.16■□□□□ 0.34
SNF8-207ENST00000509995 SEPT12Q8IYM1 358 aa17.15■□□□□ 0.34
SNF8-207ENST00000509995 E9PCH4 1651 aa17.15■□□□□ 0.34
SNF8-207ENST00000509995 R3HDM1Q15032 1099 aaKnown RBP17.14■□□□□ 0.33
SNF8-207ENST00000509995 UTRNP46939 3433 aa17.14■□□□□ 0.33
SNF8-207ENST00000509995 RGPD1P0DJD0 1748 aa17.13■□□□□ 0.33
SNF8-207ENST00000509995 PXDNQ92626 1479 aa17.13■□□□□ 0.33
SNF8-207ENST00000509995 KRT27Q7Z3Y8 459 aa17.11■□□□□ 0.33
SNF8-207ENST00000509995 CHIC2Q9UKJ5 165 aa17.11■□□□□ 0.33
SNF8-207ENST00000509995 USP32Q8NFA0 1604 aa17.1■□□□□ 0.33
SNF8-207ENST00000509995 KANK4Q5T7N3 995 aaPredicted RBP17.09■□□□□ 0.33
SNF8-207ENST00000509995 NPHP3Q7Z494 1330 aa17.09■□□□□ 0.33
SNF8-207ENST00000509995 ADGRL2O95490 1459 aa17.09■□□□□ 0.33
SNF8-207ENST00000509995 TNS1Q9HBL0 1735 aaKnown RBP17.07■□□□□ 0.32
SNF8-207ENST00000509995 NWD2Q9ULI1 1742 aa17.07■□□□□ 0.32
SNF8-207ENST00000509995 PLCH1Q4KWH8 1693 aa17.07■□□□□ 0.32
SNF8-207ENST00000509995 EN1Q05925 392 aaPredicted RBP17.07■□□□□ 0.32
SNF8-207ENST00000509995 DISP2A7MBM2 1401 aa17.06■□□□□ 0.32
SNF8-207ENST00000509995 ANKRD50Q9ULJ7 1429 aa17.06■□□□□ 0.32
SNF8-207ENST00000509995 ONECUT3O60422 494 aaPredicted RBP17.06■□□□□ 0.32
SNF8-207ENST00000509995 VPS72Q15906 364 aa17.05■□□□□ 0.32
SNF8-207ENST00000509995 SENP3-EIF4A1A0A087X0R7 540 aa17.04■□□□□ 0.32
SNF8-207ENST00000509995 ROBO2Q9HCK4 1378 aa17.02■□□□□ 0.32
SNF8-207ENST00000509995 XPCQ01831 940 aaPredicted RBP17.02■□□□□ 0.32
SNF8-207ENST00000509995 VPS8Q8N3P4 1428 aa17.02■□□□□ 0.31
SNF8-207ENST00000509995 CDC42BPGQ6DT37 1551 aa17.02■□□□□ 0.31
SNF8-207ENST00000509995 PRAG1Q86YV5 1406 aa17.01■□□□□ 0.31
SNF8-207ENST00000509995 CAMTA1Q9Y6Y1 1673 aa17.01■□□□□ 0.31
SNF8-207ENST00000509995 ADGRB2O60241 1585 aa17■□□□□ 0.31
SNF8-207ENST00000509995 ESCO1Q5FWF5 840 aa17■□□□□ 0.31
SNF8-207ENST00000509995 CCDC9Q9Y3X0 531 aaKnown RBP17■□□□□ 0.31
SNF8-207ENST00000509995 DCAF8L1A6NGE4 600 aa16.99■□□□□ 0.31
SNF8-207ENST00000509995 FOXO3O43524 673 aa16.99■□□□□ 0.31
SNF8-207ENST00000509995 NEXMIFQ5QGS0 1516 aa16.99■□□□□ 0.31
SNF8-207ENST00000509995 NINLQ9Y2I6 1382 aa16.99■□□□□ 0.31
SNF8-207ENST00000509995 CEP350Q5VT06 3117 aa16.99■□□□□ 0.31
SNF8-207ENST00000509995 A0A0G2JS52 829 aa16.98■□□□□ 0.31
SNF8-207ENST00000509995 MYT1Q01538 1121 aa16.98■□□□□ 0.31
SNF8-207ENST00000509995 ZNF784Q8NCA9 323 aaPredicted RBP16.98■□□□□ 0.31
SNF8-207ENST00000509995 LRPPRCP42704 1394 aaKnown RBP16.98■□□□□ 0.31
SNF8-207ENST00000509995 ABCA3Q99758 1704 aa16.98■□□□□ 0.31
SNF8-207ENST00000509995 EZH2Q15910 746 aaKnown RBP16.97■□□□□ 0.31
SNF8-207ENST00000509995 RREB1Q92766 1687 aa16.97■□□□□ 0.31
SNF8-207ENST00000509995 HFM1A2PYH4 1435 aa16.96■□□□□ 0.31
SNF8-207ENST00000509995 NRAPQ86VF7 1730 aa16.96■□□□□ 0.31
SNF8-207ENST00000509995 SPATA31A3Q5VYP0 1347 aa16.96■□□□□ 0.3
SNF8-207ENST00000509995 ZNF326Q5BKZ1 582 aaKnown RBP16.95■□□□□ 0.3
SNF8-207ENST00000509995 NUP188Q5SRE5 1749 aa16.94■□□□□ 0.3
SNF8-207ENST00000509995 FAM98CQ17RN3 349 aaKnown RBP16.93■□□□□ 0.3
SNF8-207ENST00000509995 PPP1R1BQ9UD71 204 aaPredicted RBP16.93■□□□□ 0.3
SNF8-207ENST00000509995 KIF1AQ12756 1690 aa16.93■□□□□ 0.3
SNF8-207ENST00000509995 PARD3Q8TEW0 1356 aa16.92■□□□□ 0.3
SNF8-207ENST00000509995 C1QTNF8P60827 252 aa16.92■□□□□ 0.3
SNF8-207ENST00000509995 FAM182BQ5T319 152 aa16.92■□□□□ 0.3
SNF8-207ENST00000509995 CAMKK2Q96RR4 588 aa16.92■□□□□ 0.3
SNF8-207ENST00000509995 THSD7AQ9UPZ6 1657 aa16.91■□□□□ 0.3
SNF8-207ENST00000509995 CCDC144AA2RUR9 1427 aa16.91■□□□□ 0.3
SNF8-207ENST00000509995 HAP1P54257 671 aaPredicted RBP16.91■□□□□ 0.3
SNF8-207ENST00000509995 SPON1Q9HCB6 807 aa16.89■□□□□ 0.29
SNF8-207ENST00000509995 CHD4Q14839 1912 aa16.89■□□□□ 0.29
SNF8-207ENST00000509995 TNS3Q68CZ2 1445 aa16.88■□□□□ 0.29
SNF8-207ENST00000509995 NAIPQ13075 1403 aa16.87■□□□□ 0.29
SNF8-207ENST00000509995 CLTCL1P53675 1640 aa16.86■□□□□ 0.29
SNF8-207ENST00000509995 CABLES1Q8TDN4 633 aa16.86■□□□□ 0.29
SNF8-207ENST00000509995 FMN2Q9NZ56 1722 aa16.85■□□□□ 0.29
SNF8-207ENST00000509995 KIF1BO60333 1816 aa16.85■□□□□ 0.29
SNF8-207ENST00000509995 KCNQ2O43526 872 aa16.85■□□□□ 0.29
SNF8-207ENST00000509995 NUTM2FA1L443 756 aa16.84■□□□□ 0.29
SNF8-207ENST00000509995 FAM83GA6ND36 823 aa16.83■□□□□ 0.28
SNF8-207ENST00000509995 NUP155O75694 1391 aa16.83■□□□□ 0.28
SNF8-207ENST00000509995 TRIM37O94972 964 aa16.83■□□□□ 0.28
SNF8-207ENST00000509995 COL14A1Q05707 1796 aaKnown RBP16.82■□□□□ 0.28
SNF8-207ENST00000509995 APBA3O96018 575 aa16.82■□□□□ 0.28
SNF8-207ENST00000509995 NBPF8Q3BBV2 869 aa16.82■□□□□ 0.28
SNF8-207ENST00000509995 NBPF14Q5TI25 921 aa16.82■□□□□ 0.28
SNF8-207ENST00000509995 KRT28Q7Z3Y7 464 aa16.82■□□□□ 0.28
SNF8-207ENST00000509995 NRKQ7Z2Y5 1582 aa16.81■□□□□ 0.28
SNF8-207ENST00000509995 PLEKHG5O94827 1062 aa16.81■□□□□ 0.28
SNF8-207ENST00000509995 BTG4Q9NY30 223 aa16.8■□□□□ 0.28
SNF8-207ENST00000509995 RGPD8O14715 1765 aaPredicted RBP16.79■□□□□ 0.28
SNF8-207ENST00000509995 ARHGEF10O15013 1369 aa16.79■□□□□ 0.28
SNF8-207ENST00000509995 SPATA31A5Q5VU36 1347 aa16.79■□□□□ 0.28
SNF8-207ENST00000509995 SPATA31A7Q8IWB4 1347 aa16.79■□□□□ 0.28
SNF8-207ENST00000509995 FAM196AQ6ZSG2 479 aa16.79■□□□□ 0.28
SNF8-207ENST00000509995 SBNO1A3KN83 1393 aa16.78■□□□□ 0.28
SNF8-207ENST00000509995 CASZ1Q86V15 1759 aa16.78■□□□□ 0.28
SNF8-207ENST00000509995 MYOM1P52179 1685 aa16.78■□□□□ 0.28
SNF8-207ENST00000509995 VGFO15240 615 aaPredicted RBP16.77■□□□□ 0.28
SNF8-207ENST00000509995 FAM50AQ14320 339 aaKnown RBP16.77■□□□□ 0.28
SNF8-207ENST00000509995 RRBP1Q9P2E9 1410 aaKnown RBP16.77■□□□□ 0.27
SNF8-207ENST00000509995 IFT172Q9UG01 1749 aa16.76■□□□□ 0.27
SNF8-207ENST00000509995 TECPR2O15040 1411 aa16.76■□□□□ 0.27
SNF8-207ENST00000509995 PPLO60437 1756 aa16.76■□□□□ 0.27
SNF8-207ENST00000509995 PSME1Q06323 249 aa16.75■□□□□ 0.27
SNF8-207ENST00000509995 KNDC1Q76NI1 1749 aa16.75■□□□□ 0.27
SNF8-207ENST00000509995 LMOD2Q6P5Q4 547 aa16.74■□□□□ 0.27
SNF8-207ENST00000509995 ROCK1Q13464 1354 aa16.74■□□□□ 0.27
SNF8-207ENST00000509995 NRXN1Q9ULB1 1477 aa16.73■□□□□ 0.27
SNF8-207ENST00000509995 GOLGB1Q14789 3259 aaKnown RBP16.73■□□□□ 0.27
SNF8-207ENST00000509995 WAPLQ7Z5K2 1190 aa16.72■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms