RNA–Protein interactions for RNA: ENST00000509333.5

PDLIM5-212, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2

Gene PDLIM5, Length 743 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-212ENST00000509333 NALCNQ8IZF0 1738 aa23.35■■□□□ 1.33
PDLIM5-212ENST00000509333 JCADQ9P266 1359 aa23.34■■□□□ 1.33
PDLIM5-212ENST00000509333 SAFB2Q14151 953 aaKnown RBP eCLIP23.33■■□□□ 1.33
PDLIM5-212ENST00000509333 NBPF1Q3BBV0 1214 aa23.33■■□□□ 1.33
PDLIM5-212ENST00000509333 ADGRB1O14514 1584 aa23.32■■□□□ 1.32
PDLIM5-212ENST00000509333 NUTM2FA1L443 756 aa23.32■■□□□ 1.32
PDLIM5-212ENST00000509333 ESCO1Q5FWF5 840 aa23.32■■□□□ 1.32
PDLIM5-212ENST00000509333 LRRC59Q96AG4 307 aaKnown RBP23.32■■□□□ 1.32
PDLIM5-212ENST00000509333 PHLPP1O60346 1717 aa23.3■■□□□ 1.32
PDLIM5-212ENST00000509333 LAMC1P11047 1609 aa23.3■■□□□ 1.32
PDLIM5-212ENST00000509333 AHDC1Q5TGY3 1603 aaPredicted RBP23.3■■□□□ 1.32
PDLIM5-212ENST00000509333 MED1Q15648 1581 aaPredicted RBP23.28■■□□□ 1.32
PDLIM5-212ENST00000509333 RGS17Q9UGC6 210 aaPredicted RBP23.28■■□□□ 1.32
PDLIM5-212ENST00000509333 SOS2Q07890 1332 aaPredicted RBP23.28■■□□□ 1.32
PDLIM5-212ENST00000509333 KNDC1Q76NI1 1749 aa23.28■■□□□ 1.32
PDLIM5-212ENST00000509333 COL16A1Q07092 1604 aaPredicted RBP23.27■■□□□ 1.32
PDLIM5-212ENST00000509333 DLC1Q96QB1 1528 aa23.27■■□□□ 1.32
PDLIM5-212ENST00000509333 FOXO3O43524 673 aa23.26■■□□□ 1.31
PDLIM5-212ENST00000509333 PHF23Q9BUL5 403 aaPredicted RBP23.26■■□□□ 1.31
PDLIM5-212ENST00000509333 SPATA31A6Q5VVP1 1343 aa23.25■■□□□ 1.31
PDLIM5-212ENST00000509333 HIRIP3Q9BW71 556 aaPredicted RBP23.23■■□□□ 1.31
PDLIM5-212ENST00000509333 MINK1Q8N4C8 1332 aaPredicted RBP23.23■■□□□ 1.31
PDLIM5-212ENST00000509333 CDC42BPGQ6DT37 1551 aa23.23■■□□□ 1.31
PDLIM5-212ENST00000509333 WASLO00401 505 aaPredicted RBP23.21■■□□□ 1.31
PDLIM5-212ENST00000509333 NPHP3Q7Z494 1330 aa23.2■■□□□ 1.3
PDLIM5-212ENST00000509333 PHF8Q9UPP1 1060 aa23.2■■□□□ 1.3
PDLIM5-212ENST00000509333 NBPF8Q3BBV2 869 aa23.19■■□□□ 1.3
PDLIM5-212ENST00000509333 PCGF6Q9BYE7 350 aa23.19■■□□□ 1.3
PDLIM5-212ENST00000509333 NHSL1Q5SYE7 1610 aa23.19■■□□□ 1.3
PDLIM5-212ENST00000509333 NUTM2BA6NNL0 878 aaPredicted RBP23.18■■□□□ 1.3
PDLIM5-212ENST00000509333 NUTM2EB1AL46 878 aaPredicted RBP23.18■■□□□ 1.3
PDLIM5-212ENST00000509333 NUTM2AQ8IVF1 878 aaPredicted RBP23.18■■□□□ 1.3
PDLIM5-212ENST00000509333 XPCQ01831 940 aaPredicted RBP23.17■■□□□ 1.3
PDLIM5-212ENST00000509333 KRT28Q7Z3Y7 464 aa23.16■■□□□ 1.3
PDLIM5-212ENST00000509333 PNPLA6Q8IY17 1366 aa23.15■■□□□ 1.3
PDLIM5-212ENST00000509333 KIAA1210Q9ULL0 1709 aa23.15■■□□□ 1.3
PDLIM5-212ENST00000509333 PRR36Q9H6K5 1346 aa23.14■■□□□ 1.3
PDLIM5-212ENST00000509333 POTEAQ6S8J7 498 aa23.14■■□□□ 1.29
PDLIM5-212ENST00000509333 CDK19Q9BWU1 502 aa23.14■■□□□ 1.29
PDLIM5-212ENST00000509333 PMFBP1Q8TBY8 1022 aa23.13■■□□□ 1.29
PDLIM5-212ENST00000509333 FMN2Q9NZ56 1722 aa23.13■■□□□ 1.29
PDLIM5-212ENST00000509333 LRP6O75581 1613 aa23.11■■□□□ 1.29
PDLIM5-212ENST00000509333 MEX3CQ5U5Q3 659 aaKnown RBP23.11■■□□□ 1.29
PDLIM5-212ENST00000509333 NUDT16Q96DE0 195 aaKnown RBP23.11■■□□□ 1.29
PDLIM5-212ENST00000509333 SHPRHQ149N8 1683 aa23.1■■□□□ 1.29
PDLIM5-212ENST00000509333 ANKARQ7Z5J8 1434 aa23.1■■□□□ 1.29
PDLIM5-212ENST00000509333 PSME1Q06323 249 aa23.1■■□□□ 1.29
PDLIM5-212ENST00000509333 SOCS7O14512 581 aa23.09■■□□□ 1.29
PDLIM5-212ENST00000509333 PXDNQ92626 1479 aa23.09■■□□□ 1.29
PDLIM5-212ENST00000509333 SPATA31A3Q5VYP0 1347 aa23.08■■□□□ 1.29
PDLIM5-212ENST00000509333 TONSLQ96HA7 1378 aa23.08■■□□□ 1.29
PDLIM5-212ENST00000509333 RGPD8O14715 1765 aaPredicted RBP23.08■■□□□ 1.29
PDLIM5-212ENST00000509333 CENPJQ9HC77 1338 aaPredicted RBP23.08■■□□□ 1.28
PDLIM5-212ENST00000509333 ADGRB2O60241 1585 aa23.06■■□□□ 1.28
PDLIM5-212ENST00000509333 EIF3AQ14152 1382 aaKnown RBP23.05■■□□□ 1.28
PDLIM5-212ENST00000509333 ADAMTS2O95450 1211 aa23.05■■□□□ 1.28
PDLIM5-212ENST00000509333 CCDC61Q9Y6R9 512 aa23.05■■□□□ 1.28
PDLIM5-212ENST00000509333 ARHGEF28Q8N1W1 1705 aaKnown RBP23.05■■□□□ 1.28
PDLIM5-212ENST00000509333 ROCK2O75116 1388 aaKnown RBP23.04■■□□□ 1.28
PDLIM5-212ENST00000509333 ZNF772Q68DY9 489 aaPredicted RBP23.04■■□□□ 1.28
PDLIM5-212ENST00000509333 USP32Q8NFA0 1604 aa23.03■■□□□ 1.28
PDLIM5-212ENST00000509333 PLEKHG3A1L390 1219 aa23.02■■□□□ 1.28
PDLIM5-212ENST00000509333 NGDNQ8NEJ9 315 aaKnown RBP23.02■■□□□ 1.28
PDLIM5-212ENST00000509333 C8orf37Q96NL8 207 aa23.02■■□□□ 1.28
PDLIM5-212ENST00000509333 SBNO1A3KN83 1393 aa23.01■■□□□ 1.27
PDLIM5-212ENST00000509333 GPRASP1Q5JY77 1395 aa23.01■■□□□ 1.27
PDLIM5-212ENST00000509333 NGLY1Q96IV0 654 aa23.01■■□□□ 1.27
PDLIM5-212ENST00000509333 CABP2Q9NPB3 220 aa23.01■■□□□ 1.27
PDLIM5-212ENST00000509333 TULP4Q9NRJ4 1543 aa23■■□□□ 1.27
PDLIM5-212ENST00000509333 CARD11Q9BXL7 1154 aa23■■□□□ 1.27
PDLIM5-212ENST00000509333 AFF2P51816 1311 aa23■■□□□ 1.27
PDLIM5-212ENST00000509333 TRPM1Q7Z4N2 1603 aa22.99■■□□□ 1.27
PDLIM5-212ENST00000509333 KIF1AQ12756 1690 aa22.98■■□□□ 1.27
PDLIM5-212ENST00000509333 SRPK2P78362 688 aaKnown RBP22.98■■□□□ 1.27
PDLIM5-212ENST00000509333 LMOD2Q6P5Q4 547 aa22.97■■□□□ 1.27
PDLIM5-212ENST00000509333 FNBP4Q8N3X1 1017 aaPredicted RBP22.97■■□□□ 1.27
PDLIM5-212ENST00000509333 CLSPNQ9HAW4 1339 aa22.97■■□□□ 1.27
PDLIM5-212ENST00000509333 CABLES1Q8TDN4 633 aa22.96■■□□□ 1.27
PDLIM5-212ENST00000509333 QTRT2Q9H974 415 aaKnown RBP22.96■■□□□ 1.27
PDLIM5-212ENST00000509333 TIMELESSQ9UNS1 1208 aa22.96■■□□□ 1.27
PDLIM5-212ENST00000509333 ACEP12821 1306 aa22.95■■□□□ 1.26
PDLIM5-212ENST00000509333 ATP7BP35670 1465 aa22.94■■□□□ 1.26
PDLIM5-212ENST00000509333 EVC2Q86UK5 1308 aa22.93■■□□□ 1.26
PDLIM5-212ENST00000509333 CABP1Q9NZU7 370 aa22.93■■□□□ 1.26
PDLIM5-212ENST00000509333 COL22A1Q8NFW1 1626 aaPredicted RBP22.93■■□□□ 1.26
PDLIM5-212ENST00000509333 TNS3Q68CZ2 1445 aa22.92■■□□□ 1.26
PDLIM5-212ENST00000509333 RXRBP28702 533 aa22.92■■□□□ 1.26
PDLIM5-212ENST00000509333 POLR3AO14802 1390 aaPredicted RBP22.91■■□□□ 1.26
PDLIM5-212ENST00000509333 PAK3O75914 559 aaPredicted RBP22.91■■□□□ 1.26
PDLIM5-212ENST00000509333 USP21Q9UK80 565 aa22.91■■□□□ 1.26
PDLIM5-212ENST00000509333 ARHGEF10O15013 1369 aa22.9■■□□□ 1.26
PDLIM5-212ENST00000509333 PLEKHG5O94827 1062 aa22.9■■□□□ 1.26
PDLIM5-212ENST00000509333 RALGAPBQ86X10 1494 aa22.88■■□□□ 1.25
PDLIM5-212ENST00000509333 RBM6P78332 1123 aaKnown RBP22.87■■□□□ 1.25
PDLIM5-212ENST00000509333 CCER1Q8TC90 406 aaPredicted RBP22.87■■□□□ 1.25
PDLIM5-212ENST00000509333 FAM83GA6ND36 823 aa22.86■■□□□ 1.25
PDLIM5-212ENST00000509333 PPIP5K1Q6PFW1 1433 aa22.85■■□□□ 1.25
PDLIM5-212ENST00000509333 HAP1P54257 671 aaPredicted RBP22.85■■□□□ 1.25
PDLIM5-212ENST00000509333 TRPC5Q9UL62 973 aaPredicted RBP22.85■■□□□ 1.25
PDLIM5-212ENST00000509333 ST20-MTHFSA0A0A6YYL1 179 aa22.84■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 74 ms