RNA–Protein interactions for RNA: ENST00000508639.5

SIL1-210, Transcript of SIL1 nucleotide exchange factor, humanhuman

TSL 3

Gene SIL1, Length 675 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIL1-210ENST00000508639 QTRT2Q9H974 415 aaKnown RBP15.8■□□□□ 0.12
SIL1-210ENST00000508639 CDK12Q9NYV4 1490 aaPredicted RBP15.79■□□□□ 0.12
SIL1-210ENST00000508639 TECPR2O15040 1411 aa15.79■□□□□ 0.12
SIL1-210ENST00000508639 ADAMTS2O95450 1211 aa15.78■□□□□ 0.12
SIL1-210ENST00000508639 STK26Q9P289 416 aa15.78■□□□□ 0.12
SIL1-210ENST00000508639 PXDNQ92626 1479 aa15.78■□□□□ 0.12
SIL1-210ENST00000508639 RGS12O14924 1447 aa15.77■□□□□ 0.12
SIL1-210ENST00000508639 LRPPRCP42704 1394 aaKnown RBP15.77■□□□□ 0.12
SIL1-210ENST00000508639 ABCC11Q96J66 1382 aa15.77■□□□□ 0.12
SIL1-210ENST00000508639 CCDC144AA2RUR9 1427 aa15.77■□□□□ 0.11
SIL1-210ENST00000508639 PIK3C2GO75747 1445 aa15.77■□□□□ 0.11
SIL1-210ENST00000508639 COL22A1Q8NFW1 1626 aaPredicted RBP15.76■□□□□ 0.11
SIL1-210ENST00000508639 CDC42BPGQ6DT37 1551 aa15.76■□□□□ 0.11
SIL1-210ENST00000508639 XPCQ01831 940 aaPredicted RBP15.76■□□□□ 0.11
SIL1-210ENST00000508639 NUTM2FA1L443 756 aa15.75■□□□□ 0.11
SIL1-210ENST00000508639 FOXO3O43524 673 aa15.75■□□□□ 0.11
SIL1-210ENST00000508639 FNBP4Q8N3X1 1017 aaPredicted RBP15.75■□□□□ 0.11
SIL1-210ENST00000508639 ANKRD30BQ9BXX2 1392 aa15.75■□□□□ 0.11
SIL1-210ENST00000508639 MYOM2P54296 1465 aa15.74■□□□□ 0.11
SIL1-210ENST00000508639 RBM6P78332 1123 aaKnown RBP15.74■□□□□ 0.11
SIL1-210ENST00000508639 ESCO1Q5FWF5 840 aa15.74■□□□□ 0.11
SIL1-210ENST00000508639 NGLY1Q96IV0 654 aa15.74■□□□□ 0.11
SIL1-210ENST00000508639 KNDC1Q76NI1 1749 aa15.74■□□□□ 0.11
SIL1-210ENST00000508639 NRXN1Q9ULB1 1477 aa15.73■□□□□ 0.11
SIL1-210ENST00000508639 RGPD8O14715 1765 aaPredicted RBP15.73■□□□□ 0.11
SIL1-210ENST00000508639 C14orf93Q9H972 538 aaKnown RBP15.73■□□□□ 0.11
SIL1-210ENST00000508639 YTHDC2Q9H6S0 1430 aaKnown RBP15.72■□□□□ 0.11
SIL1-210ENST00000508639 CFAP70Q5T0N1 1121 aa15.72■□□□□ 0.11
SIL1-210ENST00000508639 BCL9LQ86UU0 1499 aa15.71■□□□□ 0.11
SIL1-210ENST00000508639 FMN2Q9NZ56 1722 aa15.71■□□□□ 0.11
SIL1-210ENST00000508639 ATRNO75882 1429 aa15.7■□□□□ 0.1
SIL1-210ENST00000508639 SIRT1Q96EB6 747 aa15.7■□□□□ 0.1
SIL1-210ENST00000508639 USP21Q9UK80 565 aa15.69■□□□□ 0.1
SIL1-210ENST00000508639 NPHP3Q7Z494 1330 aa15.68■□□□□ 0.1
SIL1-210ENST00000508639 MARF1Q9Y4F3 1742 aaKnown RBP15.68■□□□□ 0.1
SIL1-210ENST00000508639 EP400Q96L91 3159 aa15.68■□□□□ 0.1
SIL1-210ENST00000508639 RAB3GAP2Q9H2M9 1393 aa15.67■□□□□ 0.1
SIL1-210ENST00000508639 SPATA31A3Q5VYP0 1347 aa15.67■□□□□ 0.1
SIL1-210ENST00000508639 SRCAPQ6ZRS2 3230 aa15.66■□□□□ 0.1
SIL1-210ENST00000508639 TRPC5Q9UL62 973 aaPredicted RBP15.65■□□□□ 0.1
SIL1-210ENST00000508639 USP32Q8NFA0 1604 aa15.65■□□□□ 0.1
SIL1-210ENST00000508639 ADGRB1O14514 1584 aa15.64■□□□□ 0.09
SIL1-210ENST00000508639 KRT28Q7Z3Y7 464 aa15.64■□□□□ 0.09
SIL1-210ENST00000508639 SLIT2O94813 1529 aa15.63■□□□□ 0.09
SIL1-210ENST00000508639 SAFB2Q14151 953 aaKnown RBP eCLIP15.62■□□□□ 0.09
SIL1-210ENST00000508639 CABLES1Q8TDN4 633 aa15.62■□□□□ 0.09
SIL1-210ENST00000508639 PRAM1Q96QH2 718 aa15.62■□□□□ 0.09
SIL1-210ENST00000508639 GLI3P10071 1580 aa15.62■□□□□ 0.09
SIL1-210ENST00000508639 PHF8Q9UPP1 1060 aa15.61■□□□□ 0.09
SIL1-210ENST00000508639 DHX57Q6P158 1386 aaKnown RBP15.61■□□□□ 0.09
SIL1-210ENST00000508639 GJD4Q96KN9 370 aaPredicted RBP15.6■□□□□ 0.09
SIL1-210ENST00000508639 PRR36Q9H6K5 1346 aa15.6■□□□□ 0.09
SIL1-210ENST00000508639 KIF1AQ12756 1690 aa15.6■□□□□ 0.09
SIL1-210ENST00000508639 DLC1Q96QB1 1528 aa15.59■□□□□ 0.09
SIL1-210ENST00000508639 TNKS1BP1Q9C0C2 1729 aaKnown RBP15.59■□□□□ 0.09
SIL1-210ENST00000508639 BRWD3Q6RI45 1802 aa15.58■□□□□ 0.08
SIL1-210ENST00000508639 UNC5CLQ8IV45 518 aa15.57■□□□□ 0.08
SIL1-210ENST00000508639 PMFBP1Q8TBY8 1022 aa15.57■□□□□ 0.08
SIL1-210ENST00000508639 RALGAPBQ86X10 1494 aa15.57■□□□□ 0.08
SIL1-210ENST00000508639 ABCA3Q99758 1704 aa15.57■□□□□ 0.08
SIL1-210ENST00000508639 HIRIP3Q9BW71 556 aaPredicted RBP15.56■□□□□ 0.08
SIL1-210ENST00000508639 TRAK1Q9UPV9 953 aa15.56■□□□□ 0.08
SIL1-210ENST00000508639 KDM2AQ9Y2K7 1162 aa15.56■□□□□ 0.08
SIL1-210ENST00000508639 TNS3Q68CZ2 1445 aa15.56■□□□□ 0.08
SIL1-210ENST00000508639 TRPM3Q9HCF6 1732 aaPredicted RBP15.56■□□□□ 0.08
SIL1-210ENST00000508639 ADGRB2O60241 1585 aa15.55■□□□□ 0.08
SIL1-210ENST00000508639 SBNO1A3KN83 1393 aa15.55■□□□□ 0.08
SIL1-210ENST00000508639 ATAD2Q6PL18 1390 aa15.55■□□□□ 0.08
SIL1-210ENST00000508639 FAM83GA6ND36 823 aa15.55■□□□□ 0.08
SIL1-210ENST00000508639 DCAF11Q8TEB1 546 aa15.54■□□□□ 0.08
SIL1-210ENST00000508639 MINK1Q8N4C8 1332 aaPredicted RBP15.53■□□□□ 0.08
SIL1-210ENST00000508639 ACIN1Q9UKV3 1341 aaKnown RBP15.53■□□□□ 0.08
SIL1-210ENST00000508639 ONECUT3O60422 494 aaPredicted RBP15.53■□□□□ 0.08
SIL1-210ENST00000508639 PLEKHG5O94827 1062 aa15.53■□□□□ 0.08
SIL1-210ENST00000508639 ANKARQ7Z5J8 1434 aa15.52■□□□□ 0.08
SIL1-210ENST00000508639 ALS2Q96Q42 1657 aa15.52■□□□□ 0.08
SIL1-210ENST00000508639 HRCP23327 699 aa15.52■□□□□ 0.08
SIL1-210ENST00000508639 POGKQ9P215 609 aa15.52■□□□□ 0.08
SIL1-210ENST00000508639 PLCH1Q4KWH8 1693 aa15.51■□□□□ 0.07
SIL1-210ENST00000508639 PSME1Q06323 249 aa15.51■□□□□ 0.07
SIL1-210ENST00000508639 WASLO00401 505 aaPredicted RBP15.5■□□□□ 0.07
SIL1-210ENST00000508639 VPS72Q15906 364 aa15.5■□□□□ 0.07
SIL1-210ENST00000508639 CRYBG1Q9Y4K1 1723 aa15.5■□□□□ 0.07
SIL1-210ENST00000508639 SEPT12Q8IYM1 358 aa15.49■□□□□ 0.07
SIL1-210ENST00000508639 NRAPQ86VF7 1730 aa15.48■□□□□ 0.07
SIL1-210ENST00000508639 NWD2Q9ULI1 1742 aa15.48■□□□□ 0.07
SIL1-210ENST00000508639 ARHGEF28Q8N1W1 1705 aaKnown RBP15.48■□□□□ 0.07
SIL1-210ENST00000508639 LMOD2Q6P5Q4 547 aa15.47■□□□□ 0.07
SIL1-210ENST00000508639 TULP4Q9NRJ4 1543 aa15.47■□□□□ 0.07
SIL1-210ENST00000508639 NBPF1Q3BBV0 1214 aa15.46■□□□□ 0.07
SIL1-210ENST00000508639 DEFB132Q7Z7B7 95 aa15.46■□□□□ 0.07
SIL1-210ENST00000508639 ARHGEF10O15013 1369 aa15.46■□□□□ 0.07
SIL1-210ENST00000508639 CCDC125Q86Z20 511 aa15.45■□□□□ 0.06
SIL1-210ENST00000508639 ATP7BP35670 1465 aa15.45■□□□□ 0.06
SIL1-210ENST00000508639 NUDT16Q96DE0 195 aaKnown RBP15.43■□□□□ 0.06
SIL1-210ENST00000508639 STAC3Q96MF2 364 aa15.43■□□□□ 0.06
SIL1-210ENST00000508639 BTG4Q9NY30 223 aa15.43■□□□□ 0.06
SIL1-210ENST00000508639 CDK19Q9BWU1 502 aa15.42■□□□□ 0.06
SIL1-210ENST00000508639 BLMP54132 1417 aaPredicted RBP15.42■□□□□ 0.06
SIL1-210ENST00000508639 COL14A1Q05707 1796 aaKnown RBP15.4■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms