RNA–Protein interactions for RNA: ENST00000508573.1

SMARCA5-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5, humanhuman

TSL 2

Gene SMARCA5, Length 363 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA5-202ENST00000508573 TTC24A2A3L6 582 aaPredicted RBP8.48□□□□□ -1.05
SMARCA5-202ENST00000508573 KDM4AO75164 1064 aa8.48□□□□□ -1.05
SMARCA5-202ENST00000508573 MDM2Q00987 491 aaPredicted RBP8.48□□□□□ -1.05
SMARCA5-202ENST00000508573 MAP2K5Q13163 448 aa8.48□□□□□ -1.05
SMARCA5-202ENST00000508573 DACH1Q9UI36 760 aa8.48□□□□□ -1.05
SMARCA5-202ENST00000508573 USB1Q9BQ65 265 aaKnown RBP8.46□□□□□ -1.06
SMARCA5-202ENST00000508573 AXIN1O15169 862 aa8.45□□□□□ -1.06
SMARCA5-202ENST00000508573 CCDC24Q8N4L8 307 aa8.45□□□□□ -1.06
SMARCA5-202ENST00000508573 MINK1Q8N4C8 1332 aaPredicted RBP8.45□□□□□ -1.06
SMARCA5-202ENST00000508573 AVPP01185 164 aa8.44□□□□□ -1.06
SMARCA5-202ENST00000508573 MMP16P51512 607 aa8.44□□□□□ -1.06
SMARCA5-202ENST00000508573 HLA-CQ95604 372 aa8.44□□□□□ -1.06
SMARCA5-202ENST00000508573 VSIG10Q8N0Z9 540 aa8.43□□□□□ -1.06
SMARCA5-202ENST00000508573 USP46P62068 366 aa8.42□□□□□ -1.06
SMARCA5-202ENST00000508573 TRIM32Q13049 653 aa8.42□□□□□ -1.06
SMARCA5-202ENST00000508573 CRIPAKQ8N1N5 446 aa8.42□□□□□ -1.06
SMARCA5-202ENST00000508573 KRI1Q8N9T8 703 aaKnown RBP8.42□□□□□ -1.06
SMARCA5-202ENST00000508573 GMPR2Q9P2T1 348 aaKnown RBP8.42□□□□□ -1.06
SMARCA5-202ENST00000508573 C11orf95C9JLR9 678 aaPredicted RBP8.41□□□□□ -1.06
SMARCA5-202ENST00000508573 WNT7AO00755 349 aa8.41□□□□□ -1.06
SMARCA5-202ENST00000508573 CTC1Q2NKJ3 1217 aa8.41□□□□□ -1.06
SMARCA5-202ENST00000508573 SNIP1Q8TAD8 396 aaKnown RBP8.41□□□□□ -1.06
SMARCA5-202ENST00000508573 CCDC102AQ96A19 550 aa8.41□□□□□ -1.06
SMARCA5-202ENST00000508573 DXOO77932 396 aaKnown RBP8.4□□□□□ -1.06
SMARCA5-202ENST00000508573 GUCA2AQ02747 115 aa8.4□□□□□ -1.06
SMARCA5-202ENST00000508573 TREML4Q6UXN2 200 aa8.4□□□□□ -1.06
SMARCA5-202ENST00000508573 SYMPKQ92797 1274 aaKnown RBP8.4□□□□□ -1.06
SMARCA5-202ENST00000508573 MRGPRX2Q96LB1 330 aa8.4□□□□□ -1.06
SMARCA5-202ENST00000508573 J3QL48 77 aa8.39□□□□□ -1.07
SMARCA5-202ENST00000508573 HOXA2O43364 376 aa8.39□□□□□ -1.07
SMARCA5-202ENST00000508573 PRKCSHP14314 528 aaPredicted RBP8.39□□□□□ -1.07
SMARCA5-202ENST00000508573 SMPD1P17405 629 aa8.39□□□□□ -1.07
SMARCA5-202ENST00000508573 NUTM1Q86Y26 1132 aa8.39□□□□□ -1.07
SMARCA5-202ENST00000508573 GPCPD1Q9NPB8 672 aa8.39□□□□□ -1.07
SMARCA5-202ENST00000508573 CLCN1P35523 988 aa8.38□□□□□ -1.07
SMARCA5-202ENST00000508573 SMCPP49901 116 aaPredicted RBP8.38□□□□□ -1.07
SMARCA5-202ENST00000508573 RC3H1Q5TC82 1133 aaKnown RBP8.37□□□□□ -1.07
SMARCA5-202ENST00000508573 FAM217BQ9NTX9 383 aaPredicted RBP8.36□□□□□ -1.07
SMARCA5-202ENST00000508573 JUNDP17535 347 aa8.34□□□□□ -1.07
SMARCA5-202ENST00000508573 SKOR1P84550 965 aa8.34□□□□□ -1.07
SMARCA5-202ENST00000508573 DHX30Q7L2E3 1194 aaKnown RBP eCLIP8.34□□□□□ -1.07
SMARCA5-202ENST00000508573 HPS1Q92902 700 aa8.34□□□□□ -1.07
SMARCA5-202ENST00000508573 WFS1O76024 890 aa8.33□□□□□ -1.08
SMARCA5-202ENST00000508573 SSTR3P32745 418 aaPredicted RBP8.33□□□□□ -1.08
SMARCA5-202ENST00000508573 REPIN1Q9BWE0 567 aaKnown RBP8.33□□□□□ -1.08
SMARCA5-202ENST00000508573 ATP13A2Q9NQ11 1180 aa8.33□□□□□ -1.08
SMARCA5-202ENST00000508573 C6orf229H3BNL8 230 aa8.32□□□□□ -1.08
SMARCA5-202ENST00000508573 FDX1P10109 184 aa8.32□□□□□ -1.08
SMARCA5-202ENST00000508573 WNT7BP56706 349 aa8.32□□□□□ -1.08
SMARCA5-202ENST00000508573 PTCRAQ6ISU1 281 aaPredicted RBP8.32□□□□□ -1.08
SMARCA5-202ENST00000508573 ALDH1A1P00352 501 aa8.31□□□□□ -1.08
SMARCA5-202ENST00000508573 LCE2AQ5TA79 106 aaPredicted RBP8.31□□□□□ -1.08
SMARCA5-202ENST00000508573 RETREG3Q86VR2 466 aa8.31□□□□□ -1.08
SMARCA5-202ENST00000508573 NUDT12Q9BQG2 462 aa8.31□□□□□ -1.08
SMARCA5-202ENST00000508573 SNRPBP14678 240 aaKnown RBP8.3□□□□□ -1.08
SMARCA5-202ENST00000508573 PCDHGC3Q9UN70 934 aa8.3□□□□□ -1.08
SMARCA5-202ENST00000508573 NDUFV2P19404 249 aa8.29□□□□□ -1.08
SMARCA5-202ENST00000508573 SPIRE2Q8WWL2 714 aa8.29□□□□□ -1.08
SMARCA5-202ENST00000508573 SENP2Q9HC62 589 aa8.28□□□□□ -1.08
SMARCA5-202ENST00000508573 EHBP1Q8NDI1 1231 aa8.27□□□□□ -1.09
SMARCA5-202ENST00000508573 SIAH2O43255 324 aa8.26□□□□□ -1.09
SMARCA5-202ENST00000508573 MS4A1P11836 297 aa8.26□□□□□ -1.09
SMARCA5-202ENST00000508573 NFX1Q12986 1120 aaKnown RBP8.26□□□□□ -1.09
SMARCA5-202ENST00000508573 TTLL12Q14166 644 aaPredicted RBP8.26□□□□□ -1.09
SMARCA5-202ENST00000508573 MOXD2PA6NHM9 499 aa8.25□□□□□ -1.09
SMARCA5-202ENST00000508573 SH3BP2P78314 561 aa8.25□□□□□ -1.09
SMARCA5-202ENST00000508573 BARGINQ6ZT62 677 aa8.25□□□□□ -1.09
SMARCA5-202ENST00000508573 TRIM47Q96LD4 638 aa8.25□□□□□ -1.09
SMARCA5-202ENST00000508573 WASF2Q9Y6W5 498 aa8.25□□□□□ -1.09
SMARCA5-202ENST00000508573 TERTO14746 1132 aaKnown RBP8.24□□□□□ -1.09
SMARCA5-202ENST00000508573 CCNYL3P0C7X3 344 aa8.24□□□□□ -1.09
SMARCA5-202ENST00000508573 EVA1BQ9NVM1 165 aa8.24□□□□□ -1.09
SMARCA5-202ENST00000508573 ZMYND10O75800 440 aa8.23□□□□□ -1.09
SMARCA5-202ENST00000508573 PRR7Q8TB68 274 aa8.23□□□□□ -1.09
SMARCA5-202ENST00000508573 BAP1Q92560 729 aa8.23□□□□□ -1.09
SMARCA5-202ENST00000508573 KIFC2Q96AC6 838 aa8.23□□□□□ -1.09
SMARCA5-202ENST00000508573 CAPN5O15484 640 aaPredicted RBP8.22□□□□□ -1.09
SMARCA5-202ENST00000508573 LINC01559Q495D7 138 aa8.22□□□□□ -1.09
SMARCA5-202ENST00000508573 BEGAINQ9BUH8 593 aa8.22□□□□□ -1.09
SMARCA5-202ENST00000508573 UNC93B1Q9H1C4 597 aa8.22□□□□□ -1.09
SMARCA5-202ENST00000508573 KCNH2Q12809 1159 aa8.21□□□□□ -1.1
SMARCA5-202ENST00000508573 PTPRNQ16849 979 aa8.21□□□□□ -1.1
SMARCA5-202ENST00000508573 ZC3H15Q8WU90 426 aaKnown RBP8.21□□□□□ -1.1
SMARCA5-202ENST00000508573 MTMR2Q13614 643 aa8.2□□□□□ -1.1
SMARCA5-202ENST00000508573 GIGYF2Q6Y7W6 1299 aaKnown RBP8.2□□□□□ -1.1
SMARCA5-202ENST00000508573 SPDYE5A6NIY4 337 aa8.18□□□□□ -1.1
SMARCA5-202ENST00000508573 BMP1P13497 986 aa8.18□□□□□ -1.1
SMARCA5-202ENST00000508573 CTHP32929 405 aa8.18□□□□□ -1.1
SMARCA5-202ENST00000508573 AMHR2Q16671 573 aa8.18□□□□□ -1.1
SMARCA5-202ENST00000508573 TBC1D2Q9BYX2 928 aa8.18□□□□□ -1.1
SMARCA5-202ENST00000508573 PCDHB15Q9Y5E8 787 aa8.18□□□□□ -1.1
SMARCA5-202ENST00000508573 WIPF1O43516 503 aa8.17□□□□□ -1.1
SMARCA5-202ENST00000508573 INSM1Q01101 510 aaPredicted RBP8.17□□□□□ -1.1
SMARCA5-202ENST00000508573 TRIM46Q7Z4K8 759 aa8.17□□□□□ -1.1
SMARCA5-202ENST00000508573 PLEKHG3A1L390 1219 aa8.16□□□□□ -1.1
SMARCA5-202ENST00000508573 VARSP26640 1264 aaKnown RBP8.16□□□□□ -1.1
SMARCA5-202ENST00000508573 ZNF511Q8NB15 262 aa8.16□□□□□ -1.1
SMARCA5-202ENST00000508573 SLC16A10Q8TF71 515 aa8.16□□□□□ -1.1
SMARCA5-202ENST00000508573 DIXDC1Q155Q3 683 aa8.15□□□□□ -1.1
SMARCA5-202ENST00000508573 LCE2CQ5TA81 110 aa8.15□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms