RNA–Protein interactions for RNA: ENST00000508416.1

SKI-204, Transcript of SKI proto-oncogene, humanhuman

TSL 3

Gene SKI, Length 252 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKI-204ENST00000508416 TIMELESSQ9UNS1 1208 aa15.1■□□□□ 0.01
SKI-204ENST00000508416 PLEKHH1Q9ULM0 1364 aa15.1■□□□□ 0.01
SKI-204ENST00000508416 FAM135BQ49AJ0 1406 aa15.09■□□□□ 0.01
SKI-204ENST00000508416 ADGRL3Q9HAR2 1447 aa15.09■□□□□ 0.01
SKI-204ENST00000508416 NALCNQ8IZF0 1738 aa15.09■□□□□ 0.01
SKI-204ENST00000508416 DLC1Q96QB1 1528 aa15.08■□□□□ 0.01
SKI-204ENST00000508416 TRPM1Q7Z4N2 1603 aa15.08■□□□□ 0
SKI-204ENST00000508416 SAFB2Q14151 953 aaKnown RBP eCLIP15.08■□□□□ 0
SKI-204ENST00000508416 DCCP43146 1447 aa15.06■□□□□ 0
SKI-204ENST00000508416 HSPA1LP34931 641 aa15.05■□□□□ -0
SKI-204ENST00000508416 ROCK2O75116 1388 aaKnown RBP15.05■□□□□ -0
SKI-204ENST00000508416 ARHGEF28Q8N1W1 1705 aaKnown RBP15.03■□□□□ -0
SKI-204ENST00000508416 MST1RQ04912 1400 aa15.02■□□□□ -0
SKI-204ENST00000508416 MINK1Q8N4C8 1332 aaPredicted RBP15.02■□□□□ -0
SKI-204ENST00000508416 PHF23Q9BUL5 403 aaPredicted RBP15.02■□□□□ -0
SKI-204ENST00000508416 ROBO1Q9Y6N7 1651 aa15.02□□□□□ -0.01
SKI-204ENST00000508416 NUTM2FA1L443 756 aa15.01□□□□□ -0.01
SKI-204ENST00000508416 HIRIP3Q9BW71 556 aaPredicted RBP15.01□□□□□ -0.01
SKI-204ENST00000508416 CARD11Q9BXL7 1154 aa15.01□□□□□ -0.01
SKI-204ENST00000508416 RALGAPBQ86X10 1494 aa15.01□□□□□ -0.01
SKI-204ENST00000508416 CDC42BPGQ6DT37 1551 aa15□□□□□ -0.01
SKI-204ENST00000508416 GPRASP1Q5JY77 1395 aa14.99□□□□□ -0.01
SKI-204ENST00000508416 CENPJQ9HC77 1338 aaPredicted RBP14.99□□□□□ -0.01
SKI-204ENST00000508416 BRINP3Q76B58 766 aa14.99□□□□□ -0.01
SKI-204ENST00000508416 C1orf167Q5SNV9 1468 aa14.99□□□□□ -0.01
SKI-204ENST00000508416 ORAI2Q96SN7 254 aa14.98□□□□□ -0.01
SKI-204ENST00000508416 FMN2Q9NZ56 1722 aa14.97□□□□□ -0.01
SKI-204ENST00000508416 WASLO00401 505 aaPredicted RBP14.97□□□□□ -0.01
SKI-204ENST00000508416 ESCO1Q5FWF5 840 aa14.97□□□□□ -0.01
SKI-204ENST00000508416 MED1Q15648 1581 aaPredicted RBP14.97□□□□□ -0.01
SKI-204ENST00000508416 RGPD8O14715 1765 aaPredicted RBP14.96□□□□□ -0.01
SKI-204ENST00000508416 ADGRB2O60241 1585 aa14.95□□□□□ -0.02
SKI-204ENST00000508416 CDK19Q9BWU1 502 aa14.95□□□□□ -0.02
SKI-204ENST00000508416 EIF3AQ14152 1382 aaKnown RBP14.95□□□□□ -0.02
SKI-204ENST00000508416 QRICH2Q9H0J4 1663 aa14.94□□□□□ -0.02
SKI-204ENST00000508416 PHLPP1O60346 1717 aa14.93□□□□□ -0.02
SKI-204ENST00000508416 DDX17Q92841 729 aaKnown RBP14.93□□□□□ -0.02
SKI-204ENST00000508416 FOXO3O43524 673 aa14.91□□□□□ -0.02
SKI-204ENST00000508416 NUDT16Q96DE0 195 aaKnown RBP14.91□□□□□ -0.02
SKI-204ENST00000508416 PHF8Q9UPP1 1060 aa14.91□□□□□ -0.02
SKI-204ENST00000508416 AHDC1Q5TGY3 1603 aaPredicted RBP14.91□□□□□ -0.02
SKI-204ENST00000508416 USP32Q8NFA0 1604 aa14.91□□□□□ -0.02
SKI-204ENST00000508416 ANKARQ7Z5J8 1434 aa14.91□□□□□ -0.02
SKI-204ENST00000508416 PRR36Q9H6K5 1346 aa14.91□□□□□ -0.02
SKI-204ENST00000508416 SRPK2P78362 688 aaKnown RBP14.9□□□□□ -0.02
SKI-204ENST00000508416 NHSL1Q5SYE7 1610 aa14.9□□□□□ -0.02
SKI-204ENST00000508416 EVC2Q86UK5 1308 aa14.9□□□□□ -0.02
SKI-204ENST00000508416 TULP4Q9NRJ4 1543 aa14.89□□□□□ -0.03
SKI-204ENST00000508416 ST20-MTHFSA0A0A6YYL1 179 aa14.89□□□□□ -0.03
SKI-204ENST00000508416 PMFBP1Q8TBY8 1022 aa14.89□□□□□ -0.03
SKI-204ENST00000508416 CABP2Q9NPB3 220 aa14.89□□□□□ -0.03
SKI-204ENST00000508416 NPHP3Q7Z494 1330 aa14.88□□□□□ -0.03
SKI-204ENST00000508416 COL16A1Q07092 1604 aaPredicted RBP14.88□□□□□ -0.03
SKI-204ENST00000508416 USP47Q96K76 1375 aa14.87□□□□□ -0.03
SKI-204ENST00000508416 XPCQ01831 940 aaPredicted RBP14.87□□□□□ -0.03
SKI-204ENST00000508416 LRRC59Q96AG4 307 aaKnown RBP14.87□□□□□ -0.03
SKI-204ENST00000508416 CCDC61Q9Y6R9 512 aa14.87□□□□□ -0.03
SKI-204ENST00000508416 SOS2Q07890 1332 aaPredicted RBP14.87□□□□□ -0.03
SKI-204ENST00000508416 KIF1AQ12756 1690 aa14.87□□□□□ -0.03
SKI-204ENST00000508416 KRT28Q7Z3Y7 464 aa14.86□□□□□ -0.03
SKI-204ENST00000508416 SBNO2Q9Y2G9 1366 aa14.85□□□□□ -0.03
SKI-204ENST00000508416 ATP7BP35670 1465 aa14.85□□□□□ -0.03
SKI-204ENST00000508416 PSME1Q06323 249 aa14.85□□□□□ -0.03
SKI-204ENST00000508416 TESK2Q96S53 571 aa14.85□□□□□ -0.03
SKI-204ENST00000508416 ITSN1Q15811 1721 aa14.85□□□□□ -0.03
SKI-204ENST00000508416 SLC24A1O60721 1099 aa14.84□□□□□ -0.03
SKI-204ENST00000508416 NGDNQ8NEJ9 315 aaKnown RBP14.84□□□□□ -0.03
SKI-204ENST00000508416 JCADQ9P266 1359 aa14.84□□□□□ -0.03
SKI-204ENST00000508416 PLEKHG3A1L390 1219 aa14.83□□□□□ -0.04
SKI-204ENST00000508416 EIF4G2P78344 907 aaKnown RBP eCLIP14.82□□□□□ -0.041e-6■■■■□ 19.6
SKI-204ENST00000508416 CABP1Q9NZU7 370 aa14.82□□□□□ -0.04
SKI-204ENST00000508416 PXDNQ92626 1479 aa14.82□□□□□ -0.04
SKI-204ENST00000508416 PPIP5K1Q6PFW1 1433 aa14.81□□□□□ -0.04
SKI-204ENST00000508416 TOPAZ1Q8N9V7 1692 aa14.81□□□□□ -0.04
SKI-204ENST00000508416 ACEP12821 1306 aa14.8□□□□□ -0.04
SKI-204ENST00000508416 HSPA5P11021 654 aaKnown RBP14.79□□□□□ -0.04
SKI-204ENST00000508416 TMF1P82094 1093 aa14.79□□□□□ -0.04
SKI-204ENST00000508416 SHPRHQ149N8 1683 aa14.79□□□□□ -0.04
SKI-204ENST00000508416 SPATA31A3Q5VYP0 1347 aa14.79□□□□□ -0.04
SKI-204ENST00000508416 PNPLA6Q8IY17 1366 aa14.79□□□□□ -0.04
SKI-204ENST00000508416 PUS7Q96PZ0 661 aaKnown RBP14.79□□□□□ -0.04
SKI-204ENST00000508416 POLR3AO14802 1390 aaPredicted RBP14.78□□□□□ -0.04
SKI-204ENST00000508416 ATAD2Q6PL18 1390 aa14.78□□□□□ -0.04
SKI-204ENST00000508416 SPATA31A6Q5VVP1 1343 aa14.78□□□□□ -0.04
SKI-204ENST00000508416 NUTM2BA6NNL0 878 aaPredicted RBP14.78□□□□□ -0.04
SKI-204ENST00000508416 NUTM2EB1AL46 878 aaPredicted RBP14.78□□□□□ -0.04
SKI-204ENST00000508416 NUTM2AQ8IVF1 878 aaPredicted RBP14.78□□□□□ -0.04
SKI-204ENST00000508416 SBNO1A3KN83 1393 aa14.77□□□□□ -0.04
SKI-204ENST00000508416 PAK3O75914 559 aaPredicted RBP14.77□□□□□ -0.05
SKI-204ENST00000508416 LMOD2Q6P5Q4 547 aa14.77□□□□□ -0.05
SKI-204ENST00000508416 TMC1Q8TDI8 760 aa14.77□□□□□ -0.05
SKI-204ENST00000508416 RGS17Q9UGC6 210 aaPredicted RBP14.76□□□□□ -0.05
SKI-204ENST00000508416 CDCA8Q53HL2 280 aa14.75□□□□□ -0.05
SKI-204ENST00000508416 SLC12A5Q9H2X9 1139 aa14.75□□□□□ -0.05
SKI-204ENST00000508416 TRPM3Q9HCF6 1732 aaPredicted RBP14.75□□□□□ -0.05
SKI-204ENST00000508416 TNS3Q68CZ2 1445 aa14.75□□□□□ -0.05
SKI-204ENST00000508416 ZNF692Q9BU19 519 aaPredicted RBP14.74□□□□□ -0.05
SKI-204ENST00000508416 PLEKHG5O94827 1062 aa14.73□□□□□ -0.05
SKI-204ENST00000508416 ARHGEF10O15013 1369 aa14.73□□□□□ -0.05
SKI-204ENST00000508416 MEX3CQ5U5Q3 659 aaKnown RBP14.72□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms