RNA–Protein interactions for RNA: ENST00000508279.5

DDX41-209, Transcript of DEAD-box helicase 41, humanhuman

TSL 5

Gene DDX41, Length 776 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-209ENST00000508279 TECPR2O15040 1411 aa13.6□□□□□ -0.23
DDX41-209ENST00000508279 PRAG1Q86YV5 1406 aa13.6□□□□□ -0.23
DDX41-209ENST00000508279 SIN3AQ96ST3 1273 aa13.6□□□□□ -0.23
DDX41-209ENST00000508279 POGKQ9P215 609 aa13.6□□□□□ -0.23
DDX41-209ENST00000508279 TRAK1Q9UPV9 953 aa13.6□□□□□ -0.23
DDX41-209ENST00000508279 PRAM1Q96QH2 718 aa13.59□□□□□ -0.23
DDX41-209ENST00000508279 ORAI2Q96SN7 254 aa13.59□□□□□ -0.23
DDX41-209ENST00000508279 JCADQ9P266 1359 aa13.58□□□□□ -0.23
DDX41-209ENST00000508279 NHSL1Q5SYE7 1610 aa13.58□□□□□ -0.24
DDX41-209ENST00000508279 ESCO1Q5FWF5 840 aa13.58□□□□□ -0.24
DDX41-209ENST00000508279 CDC42BPGQ6DT37 1551 aa13.58□□□□□ -0.24
DDX41-209ENST00000508279 STAC3Q96MF2 364 aa13.57□□□□□ -0.24
DDX41-209ENST00000508279 RGPD8O14715 1765 aaPredicted RBP13.57□□□□□ -0.24
DDX41-209ENST00000508279 NUTM2BA6NNL0 878 aaPredicted RBP13.56□□□□□ -0.24
DDX41-209ENST00000508279 NUTM2EB1AL46 878 aaPredicted RBP13.56□□□□□ -0.24
DDX41-209ENST00000508279 MEX3CQ5U5Q3 659 aaKnown RBP13.56□□□□□ -0.24
DDX41-209ENST00000508279 NUTM2AQ8IVF1 878 aaPredicted RBP13.56□□□□□ -0.24
DDX41-209ENST00000508279 ADGRB1O14514 1584 aa13.56□□□□□ -0.24
DDX41-209ENST00000508279 HIRIP3Q9BW71 556 aaPredicted RBP13.55□□□□□ -0.24
DDX41-209ENST00000508279 SHPRHQ149N8 1683 aa13.55□□□□□ -0.24
DDX41-209ENST00000508279 FMN2Q9NZ56 1722 aa13.55□□□□□ -0.24
DDX41-209ENST00000508279 SIRT1Q96EB6 747 aa13.54□□□□□ -0.24
DDX41-209ENST00000508279 MINK1Q8N4C8 1332 aaPredicted RBP13.54□□□□□ -0.24
DDX41-209ENST00000508279 XPCQ01831 940 aaPredicted RBP13.53□□□□□ -0.24
DDX41-209ENST00000508279 L3MBTL2Q969R5 705 aa13.53□□□□□ -0.24
DDX41-209ENST00000508279 LRRC59Q96AG4 307 aaKnown RBP13.53□□□□□ -0.24
DDX41-209ENST00000508279 DLC1Q96QB1 1528 aa13.53□□□□□ -0.24
DDX41-209ENST00000508279 FOXO3O43524 673 aa13.52□□□□□ -0.25
DDX41-209ENST00000508279 ARHGEF28Q8N1W1 1705 aaKnown RBP13.52□□□□□ -0.25
DDX41-209ENST00000508279 KIAA1210Q9ULL0 1709 aa13.51□□□□□ -0.25
DDX41-209ENST00000508279 SPATA31A6Q5VVP1 1343 aa13.51□□□□□ -0.25
DDX41-209ENST00000508279 NBPF1Q3BBV0 1214 aa13.51□□□□□ -0.25
DDX41-209ENST00000508279 LRP6O75581 1613 aa13.5□□□□□ -0.25
DDX41-209ENST00000508279 NPHP3Q7Z494 1330 aa13.5□□□□□ -0.25
DDX41-209ENST00000508279 RGS17Q9UGC6 210 aaPredicted RBP13.49□□□□□ -0.25
DDX41-209ENST00000508279 PNPLA6Q8IY17 1366 aa13.48□□□□□ -0.25
DDX41-209ENST00000508279 SOS2Q07890 1332 aaPredicted RBP13.48□□□□□ -0.25
DDX41-209ENST00000508279 KIF1AQ12756 1690 aa13.48□□□□□ -0.25
DDX41-209ENST00000508279 PLEKHG5O94827 1062 aa13.48□□□□□ -0.25
DDX41-209ENST00000508279 PMFBP1Q8TBY8 1022 aa13.47□□□□□ -0.25
DDX41-209ENST00000508279 PCGF6Q9BYE7 350 aa13.47□□□□□ -0.25
DDX41-209ENST00000508279 PHF8Q9UPP1 1060 aa13.47□□□□□ -0.25
DDX41-209ENST00000508279 ADGRB2O60241 1585 aa13.46□□□□□ -0.25
DDX41-209ENST00000508279 ADAMTS2O95450 1211 aa13.46□□□□□ -0.25
DDX41-209ENST00000508279 USP32Q8NFA0 1604 aa13.46□□□□□ -0.26
DDX41-209ENST00000508279 TONSLQ96HA7 1378 aa13.45□□□□□ -0.26
DDX41-209ENST00000508279 PXDNQ92626 1479 aa13.45□□□□□ -0.26
DDX41-209ENST00000508279 WASLO00401 505 aaPredicted RBP13.45□□□□□ -0.26
DDX41-209ENST00000508279 MSH5O43196 834 aa13.45□□□□□ -0.26
DDX41-209ENST00000508279 POTEAQ6S8J7 498 aa13.45□□□□□ -0.26
DDX41-209ENST00000508279 KRT28Q7Z3Y7 464 aa13.45□□□□□ -0.26
DDX41-209ENST00000508279 C8orf37Q96NL8 207 aa13.45□□□□□ -0.26
DDX41-209ENST00000508279 TRPM1Q7Z4N2 1603 aa13.45□□□□□ -0.26
DDX41-209ENST00000508279 SOCS7O14512 581 aa13.44□□□□□ -0.26
DDX41-209ENST00000508279 PSME1Q06323 249 aa13.44□□□□□ -0.26
DDX41-209ENST00000508279 LMOD2Q6P5Q4 547 aa13.44□□□□□ -0.26
DDX41-209ENST00000508279 ROCK2O75116 1388 aaKnown RBP13.44□□□□□ -0.26
DDX41-209ENST00000508279 QRICH2Q9H0J4 1663 aa13.43□□□□□ -0.26
DDX41-209ENST00000508279 TULP4Q9NRJ4 1543 aa13.43□□□□□ -0.26
DDX41-209ENST00000508279 EIF3AQ14152 1382 aaKnown RBP13.43□□□□□ -0.26
DDX41-209ENST00000508279 PRR36Q9H6K5 1346 aa13.42□□□□□ -0.26
DDX41-209ENST00000508279 ANKARQ7Z5J8 1434 aa13.42□□□□□ -0.26
DDX41-209ENST00000508279 CDK19Q9BWU1 502 aa13.42□□□□□ -0.26
DDX41-209ENST00000508279 ITSN1Q15811 1721 aa13.42□□□□□ -0.26
DDX41-209ENST00000508279 AFF2P51816 1311 aa13.41□□□□□ -0.26
DDX41-209ENST00000508279 CENPJQ9HC77 1338 aaPredicted RBP13.41□□□□□ -0.26
DDX41-209ENST00000508279 NBPF8Q3BBV2 869 aa13.41□□□□□ -0.26
DDX41-209ENST00000508279 ZNF772Q68DY9 489 aaPredicted RBP13.41□□□□□ -0.26
DDX41-209ENST00000508279 NGDNQ8NEJ9 315 aaKnown RBP13.41□□□□□ -0.26
DDX41-209ENST00000508279 NGLY1Q96IV0 654 aa13.41□□□□□ -0.26
DDX41-209ENST00000508279 COL22A1Q8NFW1 1626 aaPredicted RBP13.4□□□□□ -0.26
DDX41-209ENST00000508279 HAP1P54257 671 aaPredicted RBP13.4□□□□□ -0.26
DDX41-209ENST00000508279 SRPK2P78362 688 aaKnown RBP13.4□□□□□ -0.26
DDX41-209ENST00000508279 NUDT16Q96DE0 195 aaKnown RBP13.4□□□□□ -0.26
DDX41-209ENST00000508279 SPATA31A3Q5VYP0 1347 aa13.39□□□□□ -0.27
DDX41-209ENST00000508279 PAK3O75914 559 aaPredicted RBP13.39□□□□□ -0.27
DDX41-209ENST00000508279 MARF1Q9Y4F3 1742 aaKnown RBP13.39□□□□□ -0.27
DDX41-209ENST00000508279 GPRASP1Q5JY77 1395 aa13.38□□□□□ -0.27
DDX41-209ENST00000508279 TNS3Q68CZ2 1445 aa13.38□□□□□ -0.27
DDX41-209ENST00000508279 ATP7BP35670 1465 aa13.37□□□□□ -0.27
DDX41-209ENST00000508279 CABLES1Q8TDN4 633 aa13.37□□□□□ -0.27
DDX41-209ENST00000508279 CABP2Q9NPB3 220 aa13.37□□□□□ -0.27
DDX41-209ENST00000508279 POTEDQ86YR6 584 aa13.36□□□□□ -0.27
DDX41-209ENST00000508279 CARD11Q9BXL7 1154 aa13.36□□□□□ -0.27
DDX41-209ENST00000508279 SBNO1A3KN83 1393 aa13.35□□□□□ -0.27
DDX41-209ENST00000508279 QTRT2Q9H974 415 aaKnown RBP13.35□□□□□ -0.27
DDX41-209ENST00000508279 USP21Q9UK80 565 aa13.35□□□□□ -0.27
DDX41-209ENST00000508279 TRPM3Q9HCF6 1732 aaPredicted RBP13.35□□□□□ -0.27
DDX41-209ENST00000508279 TOPAZ1Q8N9V7 1692 aa13.34□□□□□ -0.27
DDX41-209ENST00000508279 RXRBP28702 533 aa13.34□□□□□ -0.27
DDX41-209ENST00000508279 CCDC61Q9Y6R9 512 aa13.34□□□□□ -0.27
DDX41-209ENST00000508279 ARHGEF10O15013 1369 aa13.33□□□□□ -0.27
DDX41-209ENST00000508279 ACEP12821 1306 aa13.33□□□□□ -0.28
DDX41-209ENST00000508279 EVC2Q86UK5 1308 aa13.33□□□□□ -0.28
DDX41-209ENST00000508279 ABCA3Q99758 1704 aa13.33□□□□□ -0.28
DDX41-209ENST00000508279 PPIP5K1Q6PFW1 1433 aa13.32□□□□□ -0.28
DDX41-209ENST00000508279 ALS2Q96Q42 1657 aa13.32□□□□□ -0.28
DDX41-209ENST00000508279 RALGAPBQ86X10 1494 aa13.32□□□□□ -0.28
DDX41-209ENST00000508279 NUTM2GQ5VZR2 741 aa13.32□□□□□ -0.28
DDX41-209ENST00000508279 CCER1Q8TC90 406 aaPredicted RBP13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms