RNA–Protein interactions for RNA: ENST00000507955.5

DDX41-208, Transcript of DEAD-box helicase 41, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX41, Length 2,607 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-208ENST00000507955 NEUROD2Q15784 382 aa19.11■□□□□ 0.65
DDX41-208ENST00000507955 BCL11AQ9H165 835 aa19.1■□□□□ 0.65
DDX41-208ENST00000507955 SLC52A1Q9NWF4 448 aa19.1■□□□□ 0.65
DDX41-208ENST00000507955 MINK1Q8N4C8 1332 aaPredicted RBP19.09■□□□□ 0.65
DDX41-208ENST00000507955 STAG3Q9UJ98 1225 aa19.09■□□□□ 0.65
DDX41-208ENST00000507955 RRP7AQ9Y3A4 280 aaKnown RBP19.09■□□□□ 0.65
DDX41-208ENST00000507955 ARHGAP31Q2M1Z3 1444 aa19.08■□□□□ 0.65
DDX41-208ENST00000507955 SRPK2P78362 688 aaKnown RBP19.07■□□□□ 0.64
DDX41-208ENST00000507955 ZC3H13Q5T200 1668 aaKnown RBP19.07■□□□□ 0.64
DDX41-208ENST00000507955 EVC2Q86UK5 1308 aa19.07■□□□□ 0.64
DDX41-208ENST00000507955 SLFN5Q08AF3 891 aa19.07■□□□□ 0.64
DDX41-208ENST00000507955 TULP4Q9NRJ4 1543 aa19.07■□□□□ 0.64
DDX41-208ENST00000507955 PAK3O75914 559 aaPredicted RBP19.06■□□□□ 0.64
DDX41-208ENST00000507955 MTHFSP49914 203 aa19.06■□□□□ 0.64
DDX41-208ENST00000507955 PRAM1Q96QH2 718 aa19.06■□□□□ 0.64
DDX41-208ENST00000507955 DIP2BQ9P265 1576 aa19.05■□□□□ 0.64
DDX41-208ENST00000507955 PREX1Q8TCU6 1659 aa19.04■□□□□ 0.64
DDX41-208ENST00000507955 ARHGEF28Q8N1W1 1705 aaKnown RBP19.04■□□□□ 0.64
DDX41-208ENST00000507955 POGKQ9P215 609 aa19.03■□□□□ 0.64
DDX41-208ENST00000507955 CGNL1Q0VF96 1302 aa19.03■□□□□ 0.64
DDX41-208ENST00000507955 BCAR3O75815 825 aa19.03■□□□□ 0.64
DDX41-208ENST00000507955 TMEM131LA2VDJ0 1609 aa19.02■□□□□ 0.64
DDX41-208ENST00000507955 GGNBP2Q9H3C7 697 aa19.02■□□□□ 0.64
DDX41-208ENST00000507955 NOP58Q9Y2X3 529 aaKnown RBP19.02■□□□□ 0.63
DDX41-208ENST00000507955 POLR3AO14802 1390 aaPredicted RBP19■□□□□ 0.63
DDX41-208ENST00000507955 WAPLQ7Z5K2 1190 aa19■□□□□ 0.63
DDX41-208ENST00000507955 TRMT2AQ8IZ69 625 aaKnown RBP18.99■□□□□ 0.63
DDX41-208ENST00000507955 A0A1W2PP64 1363 aa18.99■□□□□ 0.63
DDX41-208ENST00000507955 WWC1Q8IX03 1113 aa18.99■□□□□ 0.63
DDX41-208ENST00000507955 ANKRD36BQ8N2N9 1353 aa18.98■□□□□ 0.63
DDX41-208ENST00000507955 TCP11L2Q8N4U5 519 aa18.97■□□□□ 0.63
DDX41-208ENST00000507955 FBLN1P23142 703 aa18.97■□□□□ 0.63
DDX41-208ENST00000507955 YTHDC2Q9H6S0 1430 aaKnown RBP18.97■□□□□ 0.63
DDX41-208ENST00000507955 ZFYVE9O95405 1425 aa18.96■□□□□ 0.63
DDX41-208ENST00000507955 PTPRMP28827 1452 aa18.96■□□□□ 0.63
DDX41-208ENST00000507955 CDK19Q9BWU1 502 aa18.95■□□□□ 0.62
DDX41-208ENST00000507955 CLTCQ00610 1675 aaKnown RBP18.94■□□□□ 0.62
DDX41-208ENST00000507955 SHPRHQ149N8 1683 aa18.94■□□□□ 0.62
DDX41-208ENST00000507955 U2AF1L5P0DN76 240 aaPredicted RBP18.94■□□□□ 0.62
DDX41-208ENST00000507955 U2AF1Q01081 240 aaKnown RBP eCLIP18.94■□□□□ 0.623e-7■■■■□ 19.9
DDX41-208ENST00000507955 E9PSI1 815 aa18.94■□□□□ 0.62
DDX41-208ENST00000507955 CABP1Q9NZU7 370 aa18.94■□□□□ 0.62
DDX41-208ENST00000507955 RUNDC1Q96C34 613 aa18.93■□□□□ 0.62
DDX41-208ENST00000507955 NKTRP30414 1462 aaKnown RBP18.92■□□□□ 0.62
DDX41-208ENST00000507955 FYB1O15117 783 aa18.92■□□□□ 0.62
DDX41-208ENST00000507955 IPO9Q96P70 1041 aaKnown RBP18.92■□□□□ 0.62
DDX41-208ENST00000507955 ALKQ9UM73 1620 aa18.92■□□□□ 0.62
DDX41-208ENST00000507955 NPM2Q86SE8 214 aaKnown RBP18.91■□□□□ 0.62
DDX41-208ENST00000507955 U2SURPO15042 1029 aaKnown RBP18.91■□□□□ 0.62
DDX41-208ENST00000507955 NBR1Q14596 966 aa18.91■□□□□ 0.62
DDX41-208ENST00000507955 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.91■□□□□ 0.62
DDX41-208ENST00000507955 CFAP53Q96M91 514 aa18.9■□□□□ 0.62
DDX41-208ENST00000507955 ANP32AP39687 249 aaKnown RBP18.9■□□□□ 0.62
DDX41-208ENST00000507955 PUS7Q96PZ0 661 aaKnown RBP18.89■□□□□ 0.62
DDX41-208ENST00000507955 BCL2L13Q9BXK5 485 aa18.89■□□□□ 0.62
DDX41-208ENST00000507955 A2ML1A8K2U0 1454 aa18.89■□□□□ 0.61
DDX41-208ENST00000507955 PDE4AP27815 886 aa18.88■□□□□ 0.61
DDX41-208ENST00000507955 PLPPR3Q6T4P5 718 aa18.88■□□□□ 0.61
DDX41-208ENST00000507955 NCKAP5LQ9HCH0 1330 aa18.88■□□□□ 0.61
DDX41-208ENST00000507955 CD163L1Q9NR16 1453 aa18.88■□□□□ 0.61
DDX41-208ENST00000507955 FRAT1Q92837 279 aaPredicted RBP18.87■□□□□ 0.61
DDX41-208ENST00000507955 ABCC11Q96J66 1382 aa18.87■□□□□ 0.61
DDX41-208ENST00000507955 ESF1Q9H501 851 aaKnown RBP18.87■□□□□ 0.61
DDX41-208ENST00000507955 TERF2IPQ9NYB0 399 aa18.87■□□□□ 0.61
DDX41-208ENST00000507955 RIMS2Q9UQ26 1411 aa18.87■□□□□ 0.61
DDX41-208ENST00000507955 TXNDC2Q86VQ3 553 aa18.87■□□□□ 0.61
DDX41-208ENST00000507955 GOLGA6L2Q8N9W4 650 aaPredicted RBP18.87■□□□□ 0.61
DDX41-208ENST00000507955 PANK1Q8TE04 598 aa18.87■□□□□ 0.61
DDX41-208ENST00000507955 TNNQ9UQP3 1299 aa18.87■□□□□ 0.61
DDX41-208ENST00000507955 TCERG1O14776 1098 aaKnown RBP18.86■□□□□ 0.61
DDX41-208ENST00000507955 PPM1GO15355 546 aaPredicted RBP18.86■□□□□ 0.61
DDX41-208ENST00000507955 DEKP35659 375 aaKnown RBP18.85■□□□□ 0.61
DDX41-208ENST00000507955 USP32Q8NFA0 1604 aa18.85■□□□□ 0.61
DDX41-208ENST00000507955 KDM2BQ8NHM5 1336 aa18.85■□□□□ 0.61
DDX41-208ENST00000507955 ZMYM3Q14202 1370 aa18.84■□□□□ 0.61
DDX41-208ENST00000507955 ATAD2Q6PL18 1390 aa18.84■□□□□ 0.61
DDX41-208ENST00000507955 COG6Q9Y2V7 657 aa18.84■□□□□ 0.61
DDX41-208ENST00000507955 METP08581 1390 aa18.84■□□□□ 0.61
DDX41-208ENST00000507955 AGLP35573 1532 aa18.83■□□□□ 0.6
DDX41-208ENST00000507955 CANXP27824 592 aaKnown RBP18.83■□□□□ 0.6
DDX41-208ENST00000507955 ARHGEF40Q8TER5 1519 aa18.82■□□□□ 0.6
DDX41-208ENST00000507955 IQSEC2Q5JU85 1478 aa18.82■□□□□ 0.6
DDX41-208ENST00000507955 HDGFL2Q7Z4V5 671 aaPredicted RBP18.82■□□□□ 0.6
DDX41-208ENST00000507955 TSR2Q969E8 191 aaKnown RBP18.82■□□□□ 0.6
DDX41-208ENST00000507955 ZBTB47Q9UFB7 747 aaPredicted RBP18.82■□□□□ 0.6
DDX41-208ENST00000507955 NSD2O96028 1365 aa18.82■□□□□ 0.6
DDX41-208ENST00000507955 PHF23Q9BUL5 403 aaPredicted RBP18.82■□□□□ 0.6
DDX41-208ENST00000507955 BACH2Q9BYV9 841 aa18.82■□□□□ 0.6
DDX41-208ENST00000507955 ZRANB1Q9UGI0 708 aa18.81■□□□□ 0.6
DDX41-208ENST00000507955 PPP6R1Q9UPN7 881 aa18.81■□□□□ 0.6
DDX41-208ENST00000507955 SPATA31D1Q6ZQQ2 1576 aa18.8■□□□□ 0.6
DDX41-208ENST00000507955 KIF13AQ9H1H9 1805 aa18.8■□□□□ 0.6
DDX41-208ENST00000507955 CEBPAP49715 358 aaPredicted RBP18.8■□□□□ 0.6
DDX41-208ENST00000507955 RGS3P49796 1198 aa18.8■□□□□ 0.6
DDX41-208ENST00000507955 CLUAP1Q96AJ1 413 aa18.8■□□□□ 0.6
DDX41-208ENST00000507955 NLRP1Q9C000 1473 aa18.79■□□□□ 0.6
DDX41-208ENST00000507955 RARSP54136 660 aaKnown RBP18.79■□□□□ 0.6
DDX41-208ENST00000507955 IGHDP01880 384 aa18.79■□□□□ 0.6
DDX41-208ENST00000507955 NGEFQ8N5V2 710 aa18.79■□□□□ 0.6
DDX41-208ENST00000507955 REREQ9P2R6 1566 aa18.78■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 69.6 ms