RNA–Protein interactions for RNA: ENST00000507900.5

DDX41-207, Transcript of DEAD-box helicase 41, humanhuman

TSL 5

Gene DDX41, Length 1,564 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-207ENST00000507900 CNGB1Q14028 1251 aaPredicted RBP22.5■■□□□ 1.19
DDX41-207ENST00000507900 CC2D1BQ5T0F9 858 aaKnown RBP22.5■■□□□ 1.19
DDX41-207ENST00000507900 LTKP29376 864 aa22.5■■□□□ 1.19
DDX41-207ENST00000507900 POGKQ9P215 609 aa22.5■■□□□ 1.19
DDX41-207ENST00000507900 THEMISQ8N1K5 641 aaPredicted RBP22.49■■□□□ 1.19
DDX41-207ENST00000507900 TMC1Q8TDI8 760 aa22.49■■□□□ 1.19
DDX41-207ENST00000507900 ATAD2Q6PL18 1390 aa22.48■■□□□ 1.19
DDX41-207ENST00000507900 SCAF1Q9H7N4 1312 aaKnown RBP22.48■■□□□ 1.19
DDX41-207ENST00000507900 PNISRQ8TF01 805 aaKnown RBP22.48■■□□□ 1.19
DDX41-207ENST00000507900 EID1Q9Y6B2 187 aa22.48■■□□□ 1.19
DDX41-207ENST00000507900 SETD1BQ9UPS6 1966 aaKnown RBP22.48■■□□□ 1.19
DDX41-207ENST00000507900 TXNDC2Q86VQ3 553 aa22.47■■□□□ 1.19
DDX41-207ENST00000507900 FAM9BQ8IZU0 186 aa22.47■■□□□ 1.19
DDX41-207ENST00000507900 CARD14Q9BXL6 1004 aa22.47■■□□□ 1.19
DDX41-207ENST00000507900 ANKRD36BQ8N2N9 1353 aa22.46■■□□□ 1.19
DDX41-207ENST00000507900 HNRNPUQ00839 825 aaKnown RBP eCLIP22.46■■□□□ 1.19
DDX41-207ENST00000507900 SAFB2Q14151 953 aaKnown RBP eCLIP22.45■■□□□ 1.18
DDX41-207ENST00000507900 SLC12A5Q9H2X9 1139 aa22.44■■□□□ 1.18
DDX41-207ENST00000507900 PLEKHH1Q9ULM0 1364 aa22.44■■□□□ 1.18
DDX41-207ENST00000507900 MINK1Q8N4C8 1332 aaPredicted RBP22.43■■□□□ 1.18
DDX41-207ENST00000507900 NSD3Q9BZ95 1437 aa22.43■■□□□ 1.18
DDX41-207ENST00000507900 ADGRB2O60241 1585 aa22.43■■□□□ 1.18
DDX41-207ENST00000507900 CABP2Q9NPB3 220 aa22.42■■□□□ 1.18
DDX41-207ENST00000507900 PLPPR3Q6T4P5 718 aa22.42■■□□□ 1.18
DDX41-207ENST00000507900 INSRP06213 1382 aa22.41■■□□□ 1.18
DDX41-207ENST00000507900 SRPK2P78362 688 aaKnown RBP22.4■■□□□ 1.18
DDX41-207ENST00000507900 BCANQ96GW7 911 aa22.4■■□□□ 1.18
DDX41-207ENST00000507900 GTF3C3Q9Y5Q9 886 aa22.4■■□□□ 1.18
DDX41-207ENST00000507900 ZBED9Q6R2W3 1325 aa22.4■■□□□ 1.18
DDX41-207ENST00000507900 WAPLQ7Z5K2 1190 aa22.39■■□□□ 1.18
DDX41-207ENST00000507900 TBX22Q9Y458 520 aa22.39■■□□□ 1.18
DDX41-207ENST00000507900 CD163L1Q9NR16 1453 aa22.39■■□□□ 1.17
DDX41-207ENST00000507900 XRN1Q8IZH2 1706 aaKnown RBP22.38■■□□□ 1.17
DDX41-207ENST00000507900 PPP2R1AP30153 589 aa22.38■■□□□ 1.17
DDX41-207ENST00000507900 NSD2O96028 1365 aa22.38■■□□□ 1.17
DDX41-207ENST00000507900 CDK19Q9BWU1 502 aa22.38■■□□□ 1.17
DDX41-207ENST00000507900 PTPRUQ92729 1446 aa22.37■■□□□ 1.17
DDX41-207ENST00000507900 ROBO2Q9HCK4 1378 aa22.37■■□□□ 1.17
DDX41-207ENST00000507900 PTCH1Q13635 1447 aa22.37■■□□□ 1.17
DDX41-207ENST00000507900 A0A1W2PP64 1363 aa22.36■■□□□ 1.17
DDX41-207ENST00000507900 ATP7BP35670 1465 aa22.36■■□□□ 1.17
DDX41-207ENST00000507900 ANKRD26Q9UPS8 1709 aa22.35■■□□□ 1.17
DDX41-207ENST00000507900 SIPA1L2Q9P2F8 1722 aaPredicted RBP22.35■■□□□ 1.17
DDX41-207ENST00000507900 CGNL1Q0VF96 1302 aa22.34■■□□□ 1.17
DDX41-207ENST00000507900 PIK3R4Q99570 1358 aa22.34■■□□□ 1.17
DDX41-207ENST00000507900 WASLO00401 505 aaPredicted RBP22.32■■□□□ 1.16
DDX41-207ENST00000507900 SLC26A8Q96RN1 970 aa22.31■■□□□ 1.16
DDX41-207ENST00000507900 TERF2IPQ9NYB0 399 aa22.31■■□□□ 1.16
DDX41-207ENST00000507900 BLMP54132 1417 aaPredicted RBP22.31■■□□□ 1.16
DDX41-207ENST00000507900 KIF20BQ96Q89 1820 aa22.3■■□□□ 1.16
DDX41-207ENST00000507900 TOPAZ1Q8N9V7 1692 aa22.29■■□□□ 1.16
DDX41-207ENST00000507900 CDC42BPGQ6DT37 1551 aa22.27■■□□□ 1.16
DDX41-207ENST00000507900 CHD2O14647 1828 aaKnown RBP22.27■■□□□ 1.16
DDX41-207ENST00000507900 AKAP12Q02952 1782 aa22.27■■□□□ 1.16
DDX41-207ENST00000507900 ANKLE2Q86XL3 938 aa22.27■■□□□ 1.16
DDX41-207ENST00000507900 MON2Q7Z3U7 1717 aa22.26■■□□□ 1.15
DDX41-207ENST00000507900 AMOTL2Q9Y2J4 779 aa22.26■■□□□ 1.15
DDX41-207ENST00000507900 ITSN1Q15811 1721 aa22.26■■□□□ 1.15
DDX41-207ENST00000507900 CPSF1Q10570 1443 aaKnown RBP22.26■■□□□ 1.15
DDX41-207ENST00000507900 HDGFL2Q7Z4V5 671 aaPredicted RBP22.25■■□□□ 1.15
DDX41-207ENST00000507900 POLR3AO14802 1390 aaPredicted RBP22.25■■□□□ 1.15
DDX41-207ENST00000507900 MORC1Q86VD1 984 aa22.25■■□□□ 1.15
DDX41-207ENST00000507900 CABP1Q9NZU7 370 aa22.25■■□□□ 1.15
DDX41-207ENST00000507900 PPIP5K1Q6PFW1 1433 aa22.24■■□□□ 1.15
DDX41-207ENST00000507900 SHPRHQ149N8 1683 aa22.21■■□□□ 1.15
DDX41-207ENST00000507900 NUDT16Q96DE0 195 aaKnown RBP22.21■■□□□ 1.15
DDX41-207ENST00000507900 CCDC61Q9Y6R9 512 aa22.21■■□□□ 1.15
DDX41-207ENST00000507900 EDC4Q6P2E9 1401 aaKnown RBP22.19■■□□□ 1.14
DDX41-207ENST00000507900 NPHP4O75161 1426 aaPredicted RBP22.19■■□□□ 1.14
DDX41-207ENST00000507900 PRR36Q9H6K5 1346 aa22.19■■□□□ 1.14
DDX41-207ENST00000507900 WDR43Q15061 677 aaKnown RBP eCLIP22.17■■□□□ 1.14
DDX41-207ENST00000507900 SMG6Q86US8 1419 aaKnown RBP22.17■■□□□ 1.14
DDX41-207ENST00000507900 NRKQ7Z2Y5 1582 aa22.17■■□□□ 1.14
DDX41-207ENST00000507900 FYB1O15117 783 aa22.16■■□□□ 1.14
DDX41-207ENST00000507900 ADAMTS8Q9UP79 889 aa22.16■■□□□ 1.14
DDX41-207ENST00000507900 NWD1Q149M9 1564 aa22.15■■□□□ 1.14
DDX41-207ENST00000507900 FMN2Q9NZ56 1722 aa22.14■■□□□ 1.14
DDX41-207ENST00000507900 KCNA6P17658 529 aa22.13■■□□□ 1.13
DDX41-207ENST00000507900 NALCNQ8IZF0 1738 aa22.13■■□□□ 1.13
DDX41-207ENST00000507900 ANKARQ7Z5J8 1434 aa22.12■■□□□ 1.13
DDX41-207ENST00000507900 PLEKHG3A1L390 1219 aa22.12■■□□□ 1.13
DDX41-207ENST00000507900 GGNBP2Q9H3C7 697 aa22.12■■□□□ 1.13
DDX41-207ENST00000507900 NKTRP30414 1462 aaKnown RBP22.11■■□□□ 1.13
DDX41-207ENST00000507900 ZNF692Q9BU19 519 aaPredicted RBP22.11■■□□□ 1.13
DDX41-207ENST00000507900 RGPD8O14715 1765 aaPredicted RBP22.1■■□□□ 1.13
DDX41-207ENST00000507900 MTHFSP49914 203 aa22.09■■□□□ 1.13
DDX41-207ENST00000507900 PDE3BQ13370 1112 aa22.09■■□□□ 1.13
DDX41-207ENST00000507900 COL3A1P02461 1466 aaPredicted RBP22.08■■□□□ 1.13
DDX41-207ENST00000507900 NCKAP5LQ9HCH0 1330 aa22.08■■□□□ 1.13
DDX41-207ENST00000507900 TNNT2P45379 298 aaPredicted RBP22.08■■□□□ 1.13
DDX41-207ENST00000507900 NUDCQ9Y266 331 aa22.08■■□□□ 1.13
DDX41-207ENST00000507900 CFAP53Q96M91 514 aa22.08■■□□□ 1.12
DDX41-207ENST00000507900 USP6P35125 1406 aa22.06■■□□□ 1.12
DDX41-207ENST00000507900 SSH2Q76I76 1423 aa22.04■■□□□ 1.12
DDX41-207ENST00000507900 SUPT16HQ9Y5B9 1047 aaKnown RBP22.04■■□□□ 1.12
DDX41-207ENST00000507900 ADGRL3Q9HAR2 1447 aa22.03■■□□□ 1.12
DDX41-207ENST00000507900 PNPLA6Q8IY17 1366 aa22.03■■□□□ 1.12
DDX41-207ENST00000507900 ACEP12821 1306 aa22.03■■□□□ 1.12
DDX41-207ENST00000507900 MAP2P11137 1827 aaKnown RBP22.03■■□□□ 1.12
DDX41-207ENST00000507900 SUGP2Q8IX01 1082 aaKnown RBP eCLIP22.03■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 110.1 ms