RNA–Protein interactions for RNA: ENST00000507678.5

SPCS3-203, Transcript of signal peptidase complex subunit 3, humanhuman

TSL 2

Gene SPCS3, Length 2,655 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPCS3-203ENST00000507678 STAG3Q9UJ98 1225 aa28.84■■■□□ 2.21
SPCS3-203ENST00000507678 MLECQ14165 292 aa28.83■■■□□ 2.21
SPCS3-203ENST00000507678 SLC52A1Q9NWF4 448 aa28.83■■■□□ 2.21
SPCS3-203ENST00000507678 MTHFSP49914 203 aa28.82■■■□□ 2.2
SPCS3-203ENST00000507678 NPM2Q86SE8 214 aaKnown RBP28.82■■■□□ 2.2
SPCS3-203ENST00000507678 CGNL1Q0VF96 1302 aa28.82■■■□□ 2.2
SPCS3-203ENST00000507678 MINK1Q8N4C8 1332 aaPredicted RBP28.81■■■□□ 2.2
SPCS3-203ENST00000507678 BCAR3O75815 825 aa28.8■■■□□ 2.2
SPCS3-203ENST00000507678 PIK3C2BO00750 1634 aa28.8■■■□□ 2.2
SPCS3-203ENST00000507678 ZC3H13Q5T200 1668 aaKnown RBP28.79■■■□□ 2.2
SPCS3-203ENST00000507678 ANP32AP39687 249 aaKnown RBP28.78■■■□□ 2.2
SPCS3-203ENST00000507678 POLR3AO14802 1390 aaPredicted RBP28.78■■■□□ 2.2
SPCS3-203ENST00000507678 POGKQ9P215 609 aa28.77■■■□□ 2.2
SPCS3-203ENST00000507678 ARHGAP31Q2M1Z3 1444 aa28.77■■■□□ 2.2
SPCS3-203ENST00000507678 TSPOAP1O95153 1857 aa28.76■■■□□ 2.19
SPCS3-203ENST00000507678 GOLGA6L2Q8N9W4 650 aaPredicted RBP28.76■■■□□ 2.19
SPCS3-203ENST00000507678 PRAM1Q96QH2 718 aa28.76■■■□□ 2.19
SPCS3-203ENST00000507678 TULP4Q9NRJ4 1543 aa28.76■■■□□ 2.19
SPCS3-203ENST00000507678 TCERG1O14776 1098 aaKnown RBP28.76■■■□□ 2.19
SPCS3-203ENST00000507678 E9PSI1 815 aa28.75■■■□□ 2.19
SPCS3-203ENST00000507678 MYO5BQ9ULV0 1848 aa28.75■■■□□ 2.19
SPCS3-203ENST00000507678 WWC1Q8IX03 1113 aa28.74■■■□□ 2.19
SPCS3-203ENST00000507678 TRMT2AQ8IZ69 625 aaKnown RBP28.74■■■□□ 2.19
SPCS3-203ENST00000507678 PAK3O75914 559 aaPredicted RBP28.73■■■□□ 2.19
SPCS3-203ENST00000507678 ARHGEF28Q8N1W1 1705 aaKnown RBP28.73■■■□□ 2.19
SPCS3-203ENST00000507678 PDE4AP27815 886 aa28.72■■■□□ 2.19
SPCS3-203ENST00000507678 GGNBP2Q9H3C7 697 aa28.72■■■□□ 2.19
SPCS3-203ENST00000507678 NOP58Q9Y2X3 529 aaKnown RBP28.72■■■□□ 2.19
SPCS3-203ENST00000507678 NKTRP30414 1462 aaKnown RBP28.72■■■□□ 2.19
SPCS3-203ENST00000507678 TCP11L2Q8N4U5 519 aa28.71■■■□□ 2.19
SPCS3-203ENST00000507678 CFAP53Q96M91 514 aa28.71■■■□□ 2.19
SPCS3-203ENST00000507678 ANKRD36BQ8N2N9 1353 aa28.7■■■□□ 2.19
SPCS3-203ENST00000507678 RUNDC1Q96C34 613 aa28.69■■■□□ 2.18
SPCS3-203ENST00000507678 U2AF1L5P0DN76 240 aaPredicted RBP28.68■■■□□ 2.18
SPCS3-203ENST00000507678 U2AF1Q01081 240 aaKnown RBP eCLIP28.68■■■□□ 2.18
SPCS3-203ENST00000507678 PREX1Q8TCU6 1659 aa28.68■■■□□ 2.18
SPCS3-203ENST00000507678 A0A1W2PP64 1363 aa28.67■■■□□ 2.18
SPCS3-203ENST00000507678 DEKP35659 375 aaKnown RBP28.66■■■□□ 2.18
SPCS3-203ENST00000507678 CANXP27824 592 aaKnown RBP28.66■■■□□ 2.18
SPCS3-203ENST00000507678 IPO9Q96P70 1041 aaKnown RBP28.64■■■□□ 2.18
SPCS3-203ENST00000507678 TMEM131LA2VDJ0 1609 aa28.64■■■□□ 2.18
SPCS3-203ENST00000507678 FRAT1Q92837 279 aaPredicted RBP28.64■■■□□ 2.17
SPCS3-203ENST00000507678 RIMBP3CA6NJZ7 1639 aa28.63■■■□□ 2.17
SPCS3-203ENST00000507678 RIMBP3BA6NNM3 1639 aa28.63■■■□□ 2.17
SPCS3-203ENST00000507678 RIMBP3Q9UFD9 1639 aa28.63■■■□□ 2.17
SPCS3-203ENST00000507678 U2SURPO15042 1029 aaKnown RBP28.63■■■□□ 2.17
SPCS3-203ENST00000507678 SHPRHQ149N8 1683 aa28.62■■■□□ 2.17
SPCS3-203ENST00000507678 BACH2Q9BYV9 841 aa28.62■■■□□ 2.17
SPCS3-203ENST00000507678 YTHDC2Q9H6S0 1430 aaKnown RBP28.62■■■□□ 2.17
SPCS3-203ENST00000507678 ZFYVE9O95405 1425 aa28.6■■■□□ 2.17
SPCS3-203ENST00000507678 BCL2L13Q9BXK5 485 aa28.6■■■□□ 2.17
SPCS3-203ENST00000507678 WAPLQ7Z5K2 1190 aa28.59■■■□□ 2.17
SPCS3-203ENST00000507678 KDM2BQ8NHM5 1336 aa28.59■■■□□ 2.17
SPCS3-203ENST00000507678 PUS7Q96PZ0 661 aaKnown RBP28.59■■■□□ 2.17
SPCS3-203ENST00000507678 CDK19Q9BWU1 502 aa28.59■■■□□ 2.17
SPCS3-203ENST00000507678 ZBTB47Q9UFB7 747 aaPredicted RBP28.59■■■□□ 2.17
SPCS3-203ENST00000507678 DIP2BQ9P265 1576 aa28.59■■■□□ 2.17
SPCS3-203ENST00000507678 NBR1Q14596 966 aa28.58■■■□□ 2.17
SPCS3-203ENST00000507678 MS4A1P11836 297 aa28.58■■■□□ 2.17
SPCS3-203ENST00000507678 CENPQQ7L2Z9 268 aaPredicted RBP28.58■■■□□ 2.17
SPCS3-203ENST00000507678 NGEFQ8N5V2 710 aa28.58■■■□□ 2.17
SPCS3-203ENST00000507678 PANK1Q8TE04 598 aa28.58■■■□□ 2.17
SPCS3-203ENST00000507678 PTPRMP28827 1452 aa28.58■■■□□ 2.17
SPCS3-203ENST00000507678 TERF2IPQ9NYB0 399 aa28.57■■■□□ 2.16
SPCS3-203ENST00000507678 CABP1Q9NZU7 370 aa28.57■■■□□ 2.16
SPCS3-203ENST00000507678 RGS3P49796 1198 aa28.56■■■□□ 2.16
SPCS3-203ENST00000507678 COG6Q9Y2V7 657 aa28.56■■■□□ 2.16
SPCS3-203ENST00000507678 FYB1O15117 783 aa28.55■■■□□ 2.16
SPCS3-203ENST00000507678 SUGP2Q8IX01 1082 aaKnown RBP eCLIP28.54■■■□□ 2.16
SPCS3-203ENST00000507678 ANO8Q9HCE9 1232 aaPredicted RBP28.54■■■□□ 2.16
SPCS3-203ENST00000507678 NSD2O96028 1365 aa28.53■■■□□ 2.16
SPCS3-203ENST00000507678 ATAD2Q6PL18 1390 aa28.52■■■□□ 2.16
SPCS3-203ENST00000507678 ABCC11Q96J66 1382 aa28.52■■■□□ 2.16
SPCS3-203ENST00000507678 USP32Q8NFA0 1604 aa28.52■■■□□ 2.16
SPCS3-203ENST00000507678 FBLN1P23142 703 aa28.52■■■□□ 2.16
SPCS3-203ENST00000507678 PPM1GO15355 546 aaPredicted RBP28.52■■■□□ 2.16
SPCS3-203ENST00000507678 ALKQ9UM73 1620 aa28.51■■■□□ 2.15
SPCS3-203ENST00000507678 HDGFL2Q7Z4V5 671 aaPredicted RBP28.51■■■□□ 2.15
SPCS3-203ENST00000507678 ESF1Q9H501 851 aaKnown RBP28.5■■■□□ 2.15
SPCS3-203ENST00000507678 CLTCQ00610 1675 aaKnown RBP28.5■■■□□ 2.15
SPCS3-203ENST00000507678 TNNQ9UQP3 1299 aa28.49■■■□□ 2.15
SPCS3-203ENST00000507678 IQSEC2Q5JU85 1478 aa28.49■■■□□ 2.15
SPCS3-203ENST00000507678 RARSP54136 660 aaKnown RBP28.47■■■□□ 2.15
SPCS3-203ENST00000507678 CLUAP1Q96AJ1 413 aa28.47■■■□□ 2.15
SPCS3-203ENST00000507678 WDR63Q8IWG1 891 aa28.46■■■□□ 2.15
SPCS3-203ENST00000507678 TSR2Q969E8 191 aaKnown RBP28.46■■■□□ 2.15
SPCS3-203ENST00000507678 NINLQ9Y2I6 1382 aa28.45■■■□□ 2.15
SPCS3-203ENST00000507678 IGHDP01880 384 aa28.45■■■□□ 2.14
SPCS3-203ENST00000507678 PHF23Q9BUL5 403 aaPredicted RBP28.45■■■□□ 2.14
SPCS3-203ENST00000507678 RIMS2Q9UQ26 1411 aa28.45■■■□□ 2.14
SPCS3-203ENST00000507678 CD163L1Q9NR16 1453 aa28.44■■■□□ 2.14
SPCS3-203ENST00000507678 A2ML1A8K2U0 1454 aa28.43■■■□□ 2.14
SPCS3-203ENST00000507678 MAPK8IP3Q9UPT6 1336 aa28.43■■■□□ 2.14
SPCS3-203ENST00000507678 PDE3AQ14432 1141 aa28.42■■■□□ 2.14
SPCS3-203ENST00000507678 TXNDC2Q86VQ3 553 aa28.41■■■□□ 2.14
SPCS3-203ENST00000507678 MYH16Q9H6N6 1097 aa28.41■■■□□ 2.14
SPCS3-203ENST00000507678 RLBP1P12271 317 aa28.4■■■□□ 2.14
SPCS3-203ENST00000507678 CCDC27Q2M243 656 aa28.39■■■□□ 2.14
SPCS3-203ENST00000507678 DIAPH1O60610 1272 aaKnown RBP28.38■■■□□ 2.13
SPCS3-203ENST00000507678 TMPOP42166 694 aaKnown RBP28.38■■■□□ 2.13
Retrieved 100 of 20,778 RNA–protein pairs in 94.9 ms