RNA–Protein interactions for RNA: ENST00000506981.1

LMNA-221, Transcript of lamin A/C, humanhuman

TSL 2

Gene LMNA, Length 576 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-221ENST00000506981 TONSLQ96HA7 1378 aa27.81■■■□□ 2.04
LMNA-221ENST00000506981 TRPM1Q7Z4N2 1603 aa27.79■■■□□ 2.04
LMNA-221ENST00000506981 PLEKHH1Q9ULM0 1364 aa27.79■■■□□ 2.04
LMNA-221ENST00000506981 POGKQ9P215 609 aa27.78■■■□□ 2.04
LMNA-221ENST00000506981 TRAK1Q9UPV9 953 aa27.77■■■□□ 2.04
LMNA-221ENST00000506981 FMN2Q9NZ56 1722 aa27.77■■■□□ 2.04
LMNA-221ENST00000506981 PRAM1Q96QH2 718 aa27.76■■■□□ 2.03
LMNA-221ENST00000506981 AHDC1Q5TGY3 1603 aaPredicted RBP27.74■■■□□ 2.03
LMNA-221ENST00000506981 NHSL1Q5SYE7 1610 aa27.74■■■□□ 2.03
LMNA-221ENST00000506981 C1orf167Q5SNV9 1468 aa27.73■■■□□ 2.03
LMNA-221ENST00000506981 SAFB2Q14151 953 aaKnown RBP eCLIP27.72■■■□□ 2.03
LMNA-221ENST00000506981 ADGRB2O60241 1585 aa27.71■■■□□ 2.03
LMNA-221ENST00000506981 BRINP3Q76B58 766 aa27.71■■■□□ 2.03
LMNA-221ENST00000506981 COL16A1Q07092 1604 aaPredicted RBP27.7■■■□□ 2.03
LMNA-221ENST00000506981 RGPD8O14715 1765 aaPredicted RBP27.7■■■□□ 2.02
LMNA-221ENST00000506981 CLSPNQ9HAW4 1339 aa27.67■■■□□ 2.02
LMNA-221ENST00000506981 NBPF1Q3BBV0 1214 aa27.67■■■□□ 2.02
LMNA-221ENST00000506981 KIF1AQ12756 1690 aa27.65■■■□□ 2.02
LMNA-221ENST00000506981 ROCK2O75116 1388 aaKnown RBP27.64■■■□□ 2.02
LMNA-221ENST00000506981 QRICH2Q9H0J4 1663 aa27.63■■■□□ 2.01
LMNA-221ENST00000506981 MINK1Q8N4C8 1332 aaPredicted RBP27.63■■■□□ 2.01
LMNA-221ENST00000506981 NUTM2FA1L443 756 aa27.62■■■□□ 2.01
LMNA-221ENST00000506981 CCER1Q8TC90 406 aaPredicted RBP27.61■■■□□ 2.01
LMNA-221ENST00000506981 EIF3AQ14152 1382 aaKnown RBP27.6■■■□□ 2.01
LMNA-221ENST00000506981 MED1Q15648 1581 aaPredicted RBP27.6■■■□□ 2.01
LMNA-221ENST00000506981 SHPRHQ149N8 1683 aa27.6■■■□□ 2.01
LMNA-221ENST00000506981 ESCO1Q5FWF5 840 aa27.6■■■□□ 2.01
LMNA-221ENST00000506981 ORAI2Q96SN7 254 aa27.6■■■□□ 2.01
LMNA-221ENST00000506981 ITSN1Q15811 1721 aa27.59■■■□□ 2.01
LMNA-221ENST00000506981 HIRIP3Q9BW71 556 aaPredicted RBP27.58■■■□□ 2.01
LMNA-221ENST00000506981 JCADQ9P266 1359 aa27.58■■■□□ 2.01
LMNA-221ENST00000506981 RALGAPBQ86X10 1494 aa27.57■■■□□ 2
LMNA-221ENST00000506981 NBPF8Q3BBV2 869 aa27.57■■■□□ 2
LMNA-221ENST00000506981 ANKARQ7Z5J8 1434 aa27.57■■■□□ 2
LMNA-221ENST00000506981 USP32Q8NFA0 1604 aa27.56■■■□□ 2
LMNA-221ENST00000506981 TULP4Q9NRJ4 1543 aa27.56■■■□□ 2
LMNA-221ENST00000506981 CENPJQ9HC77 1338 aaPredicted RBP27.54■■■□□ 2
LMNA-221ENST00000506981 DISP3Q9P2K9 1392 aa27.52■■■□□ 2
LMNA-221ENST00000506981 NPHP3Q7Z494 1330 aa27.52■■■□□ 2
LMNA-221ENST00000506981 WASLO00401 505 aaPredicted RBP27.52■■■□□ 2
LMNA-221ENST00000506981 DDX17Q92841 729 aaKnown RBP27.52■■■□□ 2
LMNA-221ENST00000506981 GPRASP1Q5JY77 1395 aa27.51■■□□□ 1.99
LMNA-221ENST00000506981 LRRC59Q96AG4 307 aaKnown RBP27.5■■□□□ 1.99
LMNA-221ENST00000506981 CARD11Q9BXL7 1154 aa27.49■■□□□ 1.99
LMNA-221ENST00000506981 TIMELESSQ9UNS1 1208 aa27.49■■□□□ 1.99
LMNA-221ENST00000506981 PHF8Q9UPP1 1060 aa27.47■■□□□ 1.99
LMNA-221ENST00000506981 SOS2Q07890 1332 aaPredicted RBP27.46■■□□□ 1.99
LMNA-221ENST00000506981 FOXO3O43524 673 aa27.46■■□□□ 1.99
LMNA-221ENST00000506981 SPATA31A6Q5VVP1 1343 aa27.45■■□□□ 1.99
LMNA-221ENST00000506981 TOPAZ1Q8N9V7 1692 aa27.45■■□□□ 1.98
LMNA-221ENST00000506981 PXDNQ92626 1479 aa27.44■■□□□ 1.98
LMNA-221ENST00000506981 PHF23Q9BUL5 403 aaPredicted RBP27.43■■□□□ 1.98
LMNA-221ENST00000506981 CDK19Q9BWU1 502 aa27.43■■□□□ 1.98
LMNA-221ENST00000506981 ATP7BP35670 1465 aa27.43■■□□□ 1.98
LMNA-221ENST00000506981 PRR36Q9H6K5 1346 aa27.41■■□□□ 1.98
LMNA-221ENST00000506981 PNPLA6Q8IY17 1366 aa27.4■■□□□ 1.98
LMNA-221ENST00000506981 XPCQ01831 940 aaPredicted RBP27.4■■□□□ 1.98
LMNA-221ENST00000506981 COL22A1Q8NFW1 1626 aaPredicted RBP27.39■■□□□ 1.98
LMNA-221ENST00000506981 SRPK2P78362 688 aaKnown RBP27.39■■□□□ 1.98
LMNA-221ENST00000506981 PMFBP1Q8TBY8 1022 aa27.39■■□□□ 1.98
LMNA-221ENST00000506981 NUDT16Q96DE0 195 aaKnown RBP27.38■■□□□ 1.97
LMNA-221ENST00000506981 PSME1Q06323 249 aa27.37■■□□□ 1.97
LMNA-221ENST00000506981 EVC2Q86UK5 1308 aa27.37■■□□□ 1.97
LMNA-221ENST00000506981 KRT28Q7Z3Y7 464 aa27.36■■□□□ 1.97
LMNA-221ENST00000506981 LRP6O75581 1613 aa27.35■■□□□ 1.97
LMNA-221ENST00000506981 MEX3CQ5U5Q3 659 aaKnown RBP27.35■■□□□ 1.97
LMNA-221ENST00000506981 TRPM3Q9HCF6 1732 aaPredicted RBP27.34■■□□□ 1.97
LMNA-221ENST00000506981 NUTM2BA6NNL0 878 aaPredicted RBP27.34■■□□□ 1.97
LMNA-221ENST00000506981 NUTM2EB1AL46 878 aaPredicted RBP27.34■■□□□ 1.97
LMNA-221ENST00000506981 NUTM2AQ8IVF1 878 aaPredicted RBP27.34■■□□□ 1.97
LMNA-221ENST00000506981 NGDNQ8NEJ9 315 aaKnown RBP27.34■■□□□ 1.97
LMNA-221ENST00000506981 SBNO2Q9Y2G9 1366 aa27.33■■□□□ 1.97
LMNA-221ENST00000506981 CCDC61Q9Y6R9 512 aa27.32■■□□□ 1.96
LMNA-221ENST00000506981 TNS3Q68CZ2 1445 aa27.32■■□□□ 1.96
LMNA-221ENST00000506981 MARF1Q9Y4F3 1742 aaKnown RBP27.31■■□□□ 1.96
LMNA-221ENST00000506981 CABP2Q9NPB3 220 aa27.31■■□□□ 1.96
LMNA-221ENST00000506981 SBNO1A3KN83 1393 aa27.3■■□□□ 1.96
LMNA-221ENST00000506981 SPATA31A3Q5VYP0 1347 aa27.29■■□□□ 1.96
LMNA-221ENST00000506981 PPIP5K1Q6PFW1 1433 aa27.29■■□□□ 1.96
LMNA-221ENST00000506981 ALS2Q96Q42 1657 aa27.27■■□□□ 1.96
LMNA-221ENST00000506981 ARHGEF10O15013 1369 aa27.26■■□□□ 1.95
LMNA-221ENST00000506981 USP47Q96K76 1375 aa27.25■■□□□ 1.95
LMNA-221ENST00000506981 ABCA3Q99758 1704 aa27.25■■□□□ 1.95
LMNA-221ENST00000506981 LMOD2Q6P5Q4 547 aa27.25■■□□□ 1.95
LMNA-221ENST00000506981 POLR3AO14802 1390 aaPredicted RBP27.24■■□□□ 1.95
LMNA-221ENST00000506981 ATAD2Q6PL18 1390 aa27.23■■□□□ 1.95
LMNA-221ENST00000506981 PLEKHG3A1L390 1219 aa27.23■■□□□ 1.95
LMNA-221ENST00000506981 AKAP12Q02952 1782 aa27.22■■□□□ 1.95
LMNA-221ENST00000506981 ACEP12821 1306 aa27.22■■□□□ 1.95
LMNA-221ENST00000506981 ST20-MTHFSA0A0A6YYL1 179 aa27.21■■□□□ 1.95
LMNA-221ENST00000506981 SLC24A1O60721 1099 aa27.21■■□□□ 1.95
LMNA-221ENST00000506981 PAK3O75914 559 aaPredicted RBP27.21■■□□□ 1.95
LMNA-221ENST00000506981 ADAMTS2O95450 1211 aa27.19■■□□□ 1.94
LMNA-221ENST00000506981 HAP1P54257 671 aaPredicted RBP27.19■■□□□ 1.94
LMNA-221ENST00000506981 C8orf37Q96NL8 207 aa27.17■■□□□ 1.94
LMNA-221ENST00000506981 CABP1Q9NZU7 370 aa27.17■■□□□ 1.94
LMNA-221ENST00000506981 CRYBG1Q9Y4K1 1723 aa27.15■■□□□ 1.94
LMNA-221ENST00000506981 PLEKHG5O94827 1062 aa27.14■■□□□ 1.94
LMNA-221ENST00000506981 ZNF772Q68DY9 489 aaPredicted RBP27.14■■□□□ 1.94
LMNA-221ENST00000506981 RGS17Q9UGC6 210 aaPredicted RBP27.14■■□□□ 1.94
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms