RNA–Protein interactions for RNA: ENST00000506909.5

PDCD6-204, Transcript of programmed cell death 6, humanhuman

TSL 3

Gene PDCD6, Length 458 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD6-204ENST00000506909 CDC42BPGQ6DT37 1551 aa19.61■□□□□ 0.73
PDCD6-204ENST00000506909 NEUROD1Q13562 356 aa19.6■□□□□ 0.73
PDCD6-204ENST00000506909 L3MBTL2Q969R5 705 aa19.6■□□□□ 0.73
PDCD6-204ENST00000506909 AHDC1Q5TGY3 1603 aaPredicted RBP19.58■□□□□ 0.73
PDCD6-204ENST00000506909 PLEKHH1Q9ULM0 1364 aa19.58■□□□□ 0.73
PDCD6-204ENST00000506909 BRINP3Q76B58 766 aa19.58■□□□□ 0.72
PDCD6-204ENST00000506909 C1orf167Q5SNV9 1468 aa19.57■□□□□ 0.72
PDCD6-204ENST00000506909 NHSL1Q5SYE7 1610 aa19.57■□□□□ 0.72
PDCD6-204ENST00000506909 ARHGEF28Q8N1W1 1705 aaKnown RBP19.56■□□□□ 0.72
PDCD6-204ENST00000506909 COL16A1Q07092 1604 aaPredicted RBP19.56■□□□□ 0.72
PDCD6-204ENST00000506909 PCGF6Q9BYE7 350 aa19.56■□□□□ 0.72
PDCD6-204ENST00000506909 FMN2Q9NZ56 1722 aa19.56■□□□□ 0.72
PDCD6-204ENST00000506909 PRAM1Q96QH2 718 aa19.55■□□□□ 0.72
PDCD6-204ENST00000506909 TRAK1Q9UPV9 953 aa19.55■□□□□ 0.72
PDCD6-204ENST00000506909 RGPD8O14715 1765 aaPredicted RBP19.53■□□□□ 0.72
PDCD6-204ENST00000506909 POGKQ9P215 609 aa19.53■□□□□ 0.72
PDCD6-204ENST00000506909 TRPM1Q7Z4N2 1603 aa19.53■□□□□ 0.72
PDCD6-204ENST00000506909 NBPF1Q3BBV0 1214 aa19.51■□□□□ 0.71
PDCD6-204ENST00000506909 ADGRB2O60241 1585 aa19.51■□□□□ 0.71
PDCD6-204ENST00000506909 SAFB2Q14151 953 aaKnown RBP eCLIP19.49■□□□□ 0.713e-8■■□□□ 13.6
PDCD6-204ENST00000506909 ORAI2Q96SN7 254 aa19.49■□□□□ 0.71
PDCD6-204ENST00000506909 SHPRHQ149N8 1683 aa19.48■□□□□ 0.71
PDCD6-204ENST00000506909 TONSLQ96HA7 1378 aa19.47■□□□□ 0.71
PDCD6-204ENST00000506909 JCADQ9P266 1359 aa19.47■□□□□ 0.71
PDCD6-204ENST00000506909 RGS17Q9UGC6 210 aaPredicted RBP19.47■□□□□ 0.71
PDCD6-204ENST00000506909 ESCO1Q5FWF5 840 aa19.45■□□□□ 0.7
PDCD6-204ENST00000506909 KIF1AQ12756 1690 aa19.45■□□□□ 0.7
PDCD6-204ENST00000506909 CLSPNQ9HAW4 1339 aa19.45■□□□□ 0.7
PDCD6-204ENST00000506909 NUTM2FA1L443 756 aa19.44■□□□□ 0.7
PDCD6-204ENST00000506909 USP32Q8NFA0 1604 aa19.43■□□□□ 0.7
PDCD6-204ENST00000506909 NBPF8Q3BBV2 869 aa19.43■□□□□ 0.7
PDCD6-204ENST00000506909 DDX17Q92841 729 aaKnown RBP19.43■□□□□ 0.7
PDCD6-204ENST00000506909 LRRC59Q96AG4 307 aaKnown RBP19.43■□□□□ 0.7
PDCD6-204ENST00000506909 SOS2Q07890 1332 aaPredicted RBP19.43■□□□□ 0.7
PDCD6-204ENST00000506909 MINK1Q8N4C8 1332 aaPredicted RBP19.43■□□□□ 0.7
PDCD6-204ENST00000506909 ANKARQ7Z5J8 1434 aa19.42■□□□□ 0.7
PDCD6-204ENST00000506909 HIRIP3Q9BW71 556 aaPredicted RBP19.41■□□□□ 0.7
PDCD6-204ENST00000506909 NPHP3Q7Z494 1330 aa19.41■□□□□ 0.7
PDCD6-204ENST00000506909 EIF3AQ14152 1382 aaKnown RBP19.41■□□□□ 0.7
PDCD6-204ENST00000506909 WASLO00401 505 aaPredicted RBP19.4■□□□□ 0.7
PDCD6-204ENST00000506909 SPATA31A6Q5VVP1 1343 aa19.4■□□□□ 0.7
PDCD6-204ENST00000506909 ROCK2O75116 1388 aaKnown RBP19.4■□□□□ 0.7
PDCD6-204ENST00000506909 QRICH2Q9H0J4 1663 aa19.4■□□□□ 0.7
PDCD6-204ENST00000506909 GPRASP1Q5JY77 1395 aa19.39■□□□□ 0.69
PDCD6-204ENST00000506909 TULP4Q9NRJ4 1543 aa19.39■□□□□ 0.69
PDCD6-204ENST00000506909 ITSN1Q15811 1721 aa19.39■□□□□ 0.69
PDCD6-204ENST00000506909 FOXO3O43524 673 aa19.38■□□□□ 0.69
PDCD6-204ENST00000506909 PXDNQ92626 1479 aa19.37■□□□□ 0.69
PDCD6-204ENST00000506909 CENPJQ9HC77 1338 aaPredicted RBP19.37■□□□□ 0.69
PDCD6-204ENST00000506909 PHF8Q9UPP1 1060 aa19.37■□□□□ 0.69
PDCD6-204ENST00000506909 RALGAPBQ86X10 1494 aa19.36■□□□□ 0.69
PDCD6-204ENST00000506909 TIMELESSQ9UNS1 1208 aa19.36■□□□□ 0.69
PDCD6-204ENST00000506909 PNPLA6Q8IY17 1366 aa19.34■□□□□ 0.69
PDCD6-204ENST00000506909 PRR36Q9H6K5 1346 aa19.34■□□□□ 0.69
PDCD6-204ENST00000506909 COL22A1Q8NFW1 1626 aaPredicted RBP19.33■□□□□ 0.69
PDCD6-204ENST00000506909 CDK19Q9BWU1 502 aa19.33■□□□□ 0.68
PDCD6-204ENST00000506909 ATP7BP35670 1465 aa19.32■□□□□ 0.68
PDCD6-204ENST00000506909 LRP6O75581 1613 aa19.32■□□□□ 0.68
PDCD6-204ENST00000506909 TOPAZ1Q8N9V7 1692 aa19.31■□□□□ 0.68
PDCD6-204ENST00000506909 POTEAQ6S8J7 498 aa19.31■□□□□ 0.68
PDCD6-204ENST00000506909 KRT28Q7Z3Y7 464 aa19.31■□□□□ 0.68
PDCD6-204ENST00000506909 XPCQ01831 940 aaPredicted RBP19.3■□□□□ 0.68
PDCD6-204ENST00000506909 PMFBP1Q8TBY8 1022 aa19.3■□□□□ 0.68
PDCD6-204ENST00000506909 NUDT16Q96DE0 195 aaKnown RBP19.3■□□□□ 0.68
PDCD6-204ENST00000506909 CARD11Q9BXL7 1154 aa19.3■□□□□ 0.68
PDCD6-204ENST00000506909 PSME1Q06323 249 aa19.29■□□□□ 0.68
PDCD6-204ENST00000506909 CCER1Q8TC90 406 aaPredicted RBP19.29■□□□□ 0.68
PDCD6-204ENST00000506909 TRPM3Q9HCF6 1732 aaPredicted RBP19.28■□□□□ 0.68
PDCD6-204ENST00000506909 SPATA31A3Q5VYP0 1347 aa19.27■□□□□ 0.68
PDCD6-204ENST00000506909 NUTM2BA6NNL0 878 aaPredicted RBP19.27■□□□□ 0.68
PDCD6-204ENST00000506909 NUTM2EB1AL46 878 aaPredicted RBP19.27■□□□□ 0.68
PDCD6-204ENST00000506909 NUTM2AQ8IVF1 878 aaPredicted RBP19.27■□□□□ 0.68
PDCD6-204ENST00000506909 CCDC61Q9Y6R9 512 aa19.27■□□□□ 0.68
PDCD6-204ENST00000506909 MARF1Q9Y4F3 1742 aaKnown RBP19.26■□□□□ 0.67
PDCD6-204ENST00000506909 SBNO1A3KN83 1393 aa19.26■□□□□ 0.67
PDCD6-204ENST00000506909 SBNO2Q9Y2G9 1366 aa19.26■□□□□ 0.67
PDCD6-204ENST00000506909 SRPK2P78362 688 aaKnown RBP19.25■□□□□ 0.67
PDCD6-204ENST00000506909 MEX3CQ5U5Q3 659 aaKnown RBP19.25■□□□□ 0.67
PDCD6-204ENST00000506909 TNS3Q68CZ2 1445 aa19.25■□□□□ 0.67
PDCD6-204ENST00000506909 EVC2Q86UK5 1308 aa19.25■□□□□ 0.67
PDCD6-204ENST00000506909 PLEKHG3A1L390 1219 aa19.24■□□□□ 0.67
PDCD6-204ENST00000506909 NGDNQ8NEJ9 315 aaKnown RBP19.24■□□□□ 0.67
PDCD6-204ENST00000506909 ALS2Q96Q42 1657 aa19.24■□□□□ 0.67
PDCD6-204ENST00000506909 POLR3AO14802 1390 aaPredicted RBP19.22■□□□□ 0.67
PDCD6-204ENST00000506909 CABP2Q9NPB3 220 aa19.22■□□□□ 0.67
PDCD6-204ENST00000506909 ARHGEF10O15013 1369 aa19.2■□□□□ 0.66
PDCD6-204ENST00000506909 ACEP12821 1306 aa19.2■□□□□ 0.66
PDCD6-204ENST00000506909 PPIP5K1Q6PFW1 1433 aa19.19■□□□□ 0.66
PDCD6-204ENST00000506909 ABCA3Q99758 1704 aa19.19■□□□□ 0.66
PDCD6-204ENST00000506909 SRCAPQ6ZRS2 3230 aa19.19■□□□□ 0.66
PDCD6-204ENST00000506909 ADAMTS2O95450 1211 aa19.17■□□□□ 0.66
PDCD6-204ENST00000506909 ZNF772Q68DY9 489 aaPredicted RBP19.17■□□□□ 0.66
PDCD6-204ENST00000506909 SLC24A1O60721 1099 aa19.16■□□□□ 0.66
PDCD6-204ENST00000506909 AKAP12Q02952 1782 aa19.16■□□□□ 0.66
PDCD6-204ENST00000506909 CRYBG1Q9Y4K1 1723 aa19.15■□□□□ 0.66
PDCD6-204ENST00000506909 ST20-MTHFSA0A0A6YYL1 179 aa19.15■□□□□ 0.66
PDCD6-204ENST00000506909 LMOD2Q6P5Q4 547 aa19.15■□□□□ 0.66
PDCD6-204ENST00000506909 UPF1Q92900 1129 aaKnown RBP eCLIP19.15■□□□□ 0.66
PDCD6-204ENST00000506909 C8orf37Q96NL8 207 aa19.15■□□□□ 0.66
PDCD6-204ENST00000506909 CABP1Q9NZU7 370 aa19.15■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms