RNA–Protein interactions for RNA: ENST00000506426.1

TRAPPC11-205, Transcript of trafficking protein particle complex 11, humanhuman

TSL 2

Gene TRAPPC11, Length 395 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-205ENST00000506426 MTRQ99707 1265 aa5.88□□□□□ -1.47
TRAPPC11-205ENST00000506426 SNRKQ9NRH2 765 aa5.88□□□□□ -1.47
TRAPPC11-205ENST00000506426 PODXL2Q9NZ53 605 aa5.88□□□□□ -1.47
TRAPPC11-205ENST00000506426 PNMA3Q9UL41 463 aa5.88□□□□□ -1.47
TRAPPC11-205ENST00000506426 NRG2O14511 850 aaPredicted RBP5.87□□□□□ -1.47
TRAPPC11-205ENST00000506426 GJA5P36382 358 aa5.87□□□□□ -1.47
TRAPPC11-205ENST00000506426 ZNF787Q6DD87 383 aa5.87□□□□□ -1.47
TRAPPC11-205ENST00000506426 RSBN1LQ6PCB5 846 aaPredicted RBP5.87□□□□□ -1.47
TRAPPC11-205ENST00000506426 SERPINA10Q9UK55 444 aa5.87□□□□□ -1.47
TRAPPC11-205ENST00000506426 COG6Q9Y2V7 657 aa5.87□□□□□ -1.47
TRAPPC11-205ENST00000506426 RSPH4AQ5TD94 716 aa5.86□□□□□ -1.47
TRAPPC11-205ENST00000506426 WWC1Q8IX03 1113 aa5.86□□□□□ -1.47
TRAPPC11-205ENST00000506426 ZNF775Q96BV0 537 aaPredicted RBP5.86□□□□□ -1.47
TRAPPC11-205ENST00000506426 CCDC97Q96F63 343 aaPredicted RBP5.86□□□□□ -1.47
TRAPPC11-205ENST00000506426 TMEM134Q9H6X4 195 aa5.86□□□□□ -1.47
TRAPPC11-205ENST00000506426 PRM3Q9NNZ6 103 aa5.86□□□□□ -1.47
TRAPPC11-205ENST00000506426 MOXD2PA6NHM9 499 aa5.85□□□□□ -1.47
TRAPPC11-205ENST00000506426 PDIA4P13667 645 aaKnown RBP5.85□□□□□ -1.47
TRAPPC11-205ENST00000506426 CSPP1Q1MSJ5 1256 aa5.85□□□□□ -1.47
TRAPPC11-205ENST00000506426 FBXO31Q5XUX0 539 aaPredicted RBP5.85□□□□□ -1.47
TRAPPC11-205ENST00000506426 PDZRN3Q9UPQ7 1066 aa5.85□□□□□ -1.47
TRAPPC11-205ENST00000506426 ZNF330Q9Y3S2 320 aaPredicted RBP5.85□□□□□ -1.47
TRAPPC11-205ENST00000506426 APLP1P51693 650 aa5.84□□□□□ -1.47
TRAPPC11-205ENST00000506426 TRIM26Q12899 539 aaPredicted RBP5.84□□□□□ -1.47
TRAPPC11-205ENST00000506426 RDH13Q8NBN7 331 aa5.84□□□□□ -1.47
TRAPPC11-205ENST00000506426 NUTM2BA6NNL0 878 aaPredicted RBP5.83□□□□□ -1.48
TRAPPC11-205ENST00000506426 NUTM2EB1AL46 878 aaPredicted RBP5.83□□□□□ -1.48
TRAPPC11-205ENST00000506426 POTECB2RU33 542 aa5.83□□□□□ -1.48
TRAPPC11-205ENST00000506426 SOCS7O14512 581 aa5.83□□□□□ -1.48
TRAPPC11-205ENST00000506426 LILRB3O75022 631 aa5.83□□□□□ -1.48
TRAPPC11-205ENST00000506426 RNF40O75150 1001 aa5.83□□□□□ -1.48
TRAPPC11-205ENST00000506426 KDM4AO75164 1064 aa5.83□□□□□ -1.48
TRAPPC11-205ENST00000506426 NDUFV2P19404 249 aa5.83□□□□□ -1.48
TRAPPC11-205ENST00000506426 USP46P62068 366 aa5.83□□□□□ -1.48
TRAPPC11-205ENST00000506426 NUTM2DQ5VT03 806 aaPredicted RBP5.83□□□□□ -1.48
TRAPPC11-205ENST00000506426 NUTM2AQ8IVF1 878 aaPredicted RBP5.83□□□□□ -1.48
TRAPPC11-205ENST00000506426 PCDHB15Q9Y5E8 787 aa5.83□□□□□ -1.48
TRAPPC11-205ENST00000506426 AP1G2O75843 785 aa5.82□□□□□ -1.48
TRAPPC11-205ENST00000506426 QPCTQ16769 361 aa5.82□□□□□ -1.48
TRAPPC11-205ENST00000506426 PRPF38BQ5VTL8 546 aaKnown RBP5.82□□□□□ -1.48
TRAPPC11-205ENST00000506426 MTMR14Q8NCE2 650 aa5.82□□□□□ -1.48
TRAPPC11-205ENST00000506426 IL21Q9HBE4 155 aa5.82□□□□□ -1.48
TRAPPC11-205ENST00000506426 GDPD2Q9HCC8 539 aa5.82□□□□□ -1.48
TRAPPC11-205ENST00000506426 EIF4ENIF1Q9NRA8 985 aaKnown RBP5.82□□□□□ -1.48
TRAPPC11-205ENST00000506426 GCGRP47871 477 aa5.81□□□□□ -1.48
TRAPPC11-205ENST00000506426 COPS2P61201 443 aa5.81□□□□□ -1.48
TRAPPC11-205ENST00000506426 RTL5Q5HYW3 569 aaPredicted RBP5.81□□□□□ -1.48
TRAPPC11-205ENST00000506426 V9GY48 417 aaPredicted RBP5.81□□□□□ -1.48
TRAPPC11-205ENST00000506426 FDX1P10109 184 aa5.8□□□□□ -1.48
TRAPPC11-205ENST00000506426 HRCP23327 699 aa5.8□□□□□ -1.48
TRAPPC11-205ENST00000506426 HDGFP51858 240 aaKnown RBP5.8□□□□□ -1.48
TRAPPC11-205ENST00000506426 TRIM67Q6ZTA4 783 aa5.8□□□□□ -1.48
TRAPPC11-205ENST00000506426 EMID1Q96A84 441 aaPredicted RBP5.8□□□□□ -1.48
TRAPPC11-205ENST00000506426 ZBTB3Q9H5J0 574 aa5.8□□□□□ -1.48
TRAPPC11-205ENST00000506426 ZBTB7CA1YPR0 619 aa5.79□□□□□ -1.48
TRAPPC11-205ENST00000506426 HOXA2O43364 376 aa5.79□□□□□ -1.48
TRAPPC11-205ENST00000506426 ABL2P42684 1182 aa5.79□□□□□ -1.48
TRAPPC11-205ENST00000506426 SLC4A3P48751 1232 aa5.79□□□□□ -1.48
TRAPPC11-205ENST00000506426 CABLES1Q8TDN4 633 aa5.79□□□□□ -1.48
TRAPPC11-205ENST00000506426 USP17L8P0C7I0 530 aa5.78□□□□□ -1.48
TRAPPC11-205ENST00000506426 SLC10A3P09131 477 aa5.77□□□□□ -1.49
TRAPPC11-205ENST00000506426 GRIPAP1Q4V328 841 aa5.77□□□□□ -1.49
TRAPPC11-205ENST00000506426 SWT1Q5T5J6 900 aaKnown RBP5.77□□□□□ -1.49
TRAPPC11-205ENST00000506426 CALR3Q96L12 384 aaKnown RBP5.77□□□□□ -1.49
TRAPPC11-205ENST00000506426 TBC1D2BQ9UPU7 963 aa5.77□□□□□ -1.49
TRAPPC11-205ENST00000506426 NDUFB9Q9Y6M9 179 aa5.76□□□□□ -1.49
TRAPPC11-205ENST00000506426 MYT1Q01538 1121 aa5.75□□□□□ -1.49
TRAPPC11-205ENST00000506426 MTMR2Q13614 643 aa5.75□□□□□ -1.49
TRAPPC11-205ENST00000506426 SLF2Q8IX21 1173 aa5.75□□□□□ -1.49
TRAPPC11-205ENST00000506426 HELBQ8NG08 1087 aaPredicted RBP5.75□□□□□ -1.49
TRAPPC11-205ENST00000506426 TRAIPQ9BWF2 469 aa5.75□□□□□ -1.49
TRAPPC11-205ENST00000506426 PCDHGC3Q9UN70 934 aa5.75□□□□□ -1.49
TRAPPC11-205ENST00000506426 ACIN1Q9UKV3 1341 aaKnown RBP5.74□□□□□ -1.49
TRAPPC11-205ENST00000506426 PPEF1O14829 653 aaPredicted RBP5.74□□□□□ -1.49
TRAPPC11-205ENST00000506426 PPP1R15AO75807 674 aaPredicted RBP5.74□□□□□ -1.49
TRAPPC11-205ENST00000506426 GUCA2AQ02747 115 aa5.74□□□□□ -1.49
TRAPPC11-205ENST00000506426 CTDSPL2Q05D32 466 aa5.74□□□□□ -1.49
TRAPPC11-205ENST00000506426 WASHC4Q2M389 1173 aa5.74□□□□□ -1.49
TRAPPC11-205ENST00000506426 GLMNQ92990 594 aa5.74□□□□□ -1.49
TRAPPC11-205ENST00000506426 GJD4Q96KN9 370 aaPredicted RBP5.74□□□□□ -1.49
TRAPPC11-205ENST00000506426 POM121CA8CG34 1229 aa5.73□□□□□ -1.49
TRAPPC11-205ENST00000506426 RNF223E7ERA6 249 aa5.73□□□□□ -1.49
TRAPPC11-205ENST00000506426 C6orf229H3BNL8 230 aa5.73□□□□□ -1.49
TRAPPC11-205ENST00000506426 TLL1O43897 1013 aa5.73□□□□□ -1.49
TRAPPC11-205ENST00000506426 KCTD17Q8N5Z5 321 aa5.73□□□□□ -1.49
TRAPPC11-205ENST00000506426 TSC1Q92574 1164 aa5.73□□□□□ -1.49
TRAPPC11-205ENST00000506426 ZPR1O75312 459 aa5.72□□□□□ -1.49
TRAPPC11-205ENST00000506426 ATP6V1AP38606 617 aa5.72□□□□□ -1.49
TRAPPC11-205ENST00000506426 SLC19A1P41440 591 aa5.72□□□□□ -1.49
TRAPPC11-205ENST00000506426 PDE4CQ08493 712 aa5.72□□□□□ -1.49
TRAPPC11-205ENST00000506426 HDGFL1Q5TGJ6 251 aa5.72□□□□□ -1.49
TRAPPC11-205ENST00000506426 HLA-CQ95604 372 aa5.72□□□□□ -1.49
TRAPPC11-205ENST00000506426 TNFRSF10AO00220 468 aa5.71□□□□□ -1.5
TRAPPC11-205ENST00000506426 ST8SIA5O15466 376 aa5.71□□□□□ -1.5
TRAPPC11-205ENST00000506426 CFHP08603 1231 aa5.71□□□□□ -1.5
TRAPPC11-205ENST00000506426 FUT2Q10981 343 aa5.71□□□□□ -1.5
TRAPPC11-205ENST00000506426 IRF5Q13568 498 aa5.71□□□□□ -1.5
TRAPPC11-205ENST00000506426 BLOC1S3Q6QNY0 202 aa5.71□□□□□ -1.5
TRAPPC11-205ENST00000506426 NECTIN2Q92692 538 aa5.71□□□□□ -1.5
TRAPPC11-205ENST00000506426 CFAP99D6REC4 459 aa5.7□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 62.9 ms