RNA–Protein interactions for RNA: ENST00000505583.5

GYPB-205, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-205ENST00000505583 LRRC59Q96AG4 307 aaKnown RBP8.88□□□□□ -0.99
GYPB-205ENST00000505583 ORAI2Q96SN7 254 aa8.88□□□□□ -0.99
GYPB-205ENST00000505583 HFM1A2PYH4 1435 aa8.88□□□□□ -0.99
GYPB-205ENST00000505583 PTCH1Q13635 1447 aa8.88□□□□□ -0.99
GYPB-205ENST00000505583 C8orf37Q96NL8 207 aa8.87□□□□□ -0.99
GYPB-205ENST00000505583 RGS12O14924 1447 aa8.87□□□□□ -0.99
GYPB-205ENST00000505583 IFT172Q9UG01 1749 aa8.86□□□□□ -0.99
GYPB-205ENST00000505583 CDK12Q9NYV4 1490 aaPredicted RBP8.86□□□□□ -0.99
GYPB-205ENST00000505583 VGFO15240 615 aaPredicted RBP8.86□□□□□ -0.99
GYPB-205ENST00000505583 ADAMTS2O95450 1211 aa8.86□□□□□ -0.99
GYPB-205ENST00000505583 PRAG1Q86YV5 1406 aa8.86□□□□□ -0.99
GYPB-205ENST00000505583 SOS2Q07890 1332 aaPredicted RBP8.85□□□□□ -0.99
GYPB-205ENST00000505583 ADGRF5Q8IZF2 1346 aa8.84□□□□□ -0.99
GYPB-205ENST00000505583 COL22A1Q8NFW1 1626 aaPredicted RBP8.84□□□□□ -0.99
GYPB-205ENST00000505583 QTRT2Q9H974 415 aaKnown RBP8.84□□□□□ -0.99
GYPB-205ENST00000505583 RPGRIP1LQ68CZ1 1315 aa8.83□□□□□ -1
GYPB-205ENST00000505583 MARF1Q9Y4F3 1742 aaKnown RBP8.83□□□□□ -1
GYPB-205ENST00000505583 CDC42BPGQ6DT37 1551 aa8.83□□□□□ -1
GYPB-205ENST00000505583 SPATA31E1Q6ZUB1 1445 aa8.83□□□□□ -1
GYPB-205ENST00000505583 MYCNP04198 464 aaPredicted RBP8.83□□□□□ -1
GYPB-205ENST00000505583 NGLY1Q96IV0 654 aa8.83□□□□□ -1
GYPB-205ENST00000505583 PXDNQ92626 1479 aa8.83□□□□□ -1
GYPB-205ENST00000505583 RGPD8O14715 1765 aaPredicted RBP8.82□□□□□ -1
GYPB-205ENST00000505583 RBM6P78332 1123 aaKnown RBP8.82□□□□□ -1
GYPB-205ENST00000505583 XPCQ01831 940 aaPredicted RBP8.82□□□□□ -1
GYPB-205ENST00000505583 RGL3Q3MIN7 710 aa8.82□□□□□ -1
GYPB-205ENST00000505583 WAPLQ7Z5K2 1190 aa8.82□□□□□ -1
GYPB-205ENST00000505583 PLEKHH1Q9ULM0 1364 aa8.82□□□□□ -1
GYPB-205ENST00000505583 KNDC1Q76NI1 1749 aa8.81□□□□□ -1
GYPB-205ENST00000505583 FMN2Q9NZ56 1722 aa8.81□□□□□ -1
GYPB-205ENST00000505583 NUTM2FA1L443 756 aa8.81□□□□□ -1
GYPB-205ENST00000505583 CACNB1Q02641 598 aaPredicted RBP8.81□□□□□ -1
GYPB-205ENST00000505583 TMEM132EQ6IEE7 984 aa8.81□□□□□ -1
GYPB-205ENST00000505583 STK26Q9P289 416 aa8.81□□□□□ -1
GYPB-205ENST00000505583 MYOM2P54296 1465 aa8.81□□□□□ -1
GYPB-205ENST00000505583 FOXO3O43524 673 aa8.8□□□□□ -1
GYPB-205ENST00000505583 ESCO1Q5FWF5 840 aa8.8□□□□□ -1
GYPB-205ENST00000505583 FNBP4Q8N3X1 1017 aaPredicted RBP8.8□□□□□ -1
GYPB-205ENST00000505583 USP21Q9UK80 565 aa8.8□□□□□ -1
GYPB-205ENST00000505583 CCDC144AA2RUR9 1427 aa8.8□□□□□ -1
GYPB-205ENST00000505583 TECPR2O15040 1411 aa8.8□□□□□ -1
GYPB-205ENST00000505583 BCL9LQ86UU0 1499 aa8.79□□□□□ -1
GYPB-205ENST00000505583 LRPPRCP42704 1394 aaKnown RBP8.79□□□□□ -1
GYPB-205ENST00000505583 MPHOSPH9Q99550 1183 aa8.79□□□□□ -1
GYPB-205ENST00000505583 PIK3C2GO75747 1445 aa8.79□□□□□ -1
GYPB-205ENST00000505583 ATRNO75882 1429 aa8.79□□□□□ -1
GYPB-205ENST00000505583 NPHP3Q7Z494 1330 aa8.78□□□□□ -1
GYPB-205ENST00000505583 ABCC11Q96J66 1382 aa8.77□□□□□ -1.01
GYPB-205ENST00000505583 TRPC5Q9UL62 973 aaPredicted RBP8.77□□□□□ -1.01
GYPB-205ENST00000505583 YTHDC2Q9H6S0 1430 aaKnown RBP8.77□□□□□ -1.01
GYPB-205ENST00000505583 ANKRD30BQ9BXX2 1392 aa8.76□□□□□ -1.01
GYPB-205ENST00000505583 KIF1AQ12756 1690 aa8.76□□□□□ -1.01
GYPB-205ENST00000505583 BRWD3Q6RI45 1802 aa8.76□□□□□ -1.01
GYPB-205ENST00000505583 GLI3P10071 1580 aa8.76□□□□□ -1.01
GYPB-205ENST00000505583 TNKS1BP1Q9C0C2 1729 aaKnown RBP8.76□□□□□ -1.01
GYPB-205ENST00000505583 ABCA3Q99758 1704 aa8.75□□□□□ -1.01
GYPB-205ENST00000505583 USP32Q8NFA0 1604 aa8.75□□□□□ -1.01
GYPB-205ENST00000505583 NRXN1Q9ULB1 1477 aa8.75□□□□□ -1.01
GYPB-205ENST00000505583 SPATA31A3Q5VYP0 1347 aa8.75□□□□□ -1.01
GYPB-205ENST00000505583 ATAD2Q6PL18 1390 aa8.74□□□□□ -1.01
GYPB-205ENST00000505583 C1QBPQ07021 282 aaKnown RBP8.74□□□□□ -1.01
GYPB-205ENST00000505583 CFAP70Q5T0N1 1121 aa8.74□□□□□ -1.01
GYPB-205ENST00000505583 C14orf93Q9H972 538 aaKnown RBP8.74□□□□□ -1.01
GYPB-205ENST00000505583 SLIT2O94813 1529 aa8.74□□□□□ -1.01
GYPB-205ENST00000505583 PLCH1Q4KWH8 1693 aa8.73□□□□□ -1.01
GYPB-205ENST00000505583 RALGAPBQ86X10 1494 aa8.73□□□□□ -1.01
GYPB-205ENST00000505583 PLEKHG5O94827 1062 aa8.73□□□□□ -1.01
GYPB-205ENST00000505583 CABLES1Q8TDN4 633 aa8.73□□□□□ -1.01
GYPB-205ENST00000505583 GJD4Q96KN9 370 aaPredicted RBP8.73□□□□□ -1.01
GYPB-205ENST00000505583 ATXN8OSP0DMR3 200 aa8.72□□□□□ -1.01
GYPB-205ENST00000505583 SAFB2Q14151 953 aaKnown RBP eCLIP8.72□□□□□ -1.01
GYPB-205ENST00000505583 KRT28Q7Z3Y7 464 aa8.72□□□□□ -1.01
GYPB-205ENST00000505583 EP400Q96L91 3159 aa8.72□□□□□ -1.01
GYPB-205ENST00000505583 TRPM3Q9HCF6 1732 aaPredicted RBP8.71□□□□□ -1.01
GYPB-205ENST00000505583 ADGRB1O14514 1584 aa8.71□□□□□ -1.02
GYPB-205ENST00000505583 UNC5CLQ8IV45 518 aa8.71□□□□□ -1.02
GYPB-205ENST00000505583 SIRT1Q96EB6 747 aa8.71□□□□□ -1.02
GYPB-205ENST00000505583 PRAM1Q96QH2 718 aa8.71□□□□□ -1.02
GYPB-205ENST00000505583 PHF8Q9UPP1 1060 aa8.71□□□□□ -1.02
GYPB-205ENST00000505583 TNS3Q68CZ2 1445 aa8.71□□□□□ -1.02
GYPB-205ENST00000505583 NRAPQ86VF7 1730 aa8.7□□□□□ -1.02
GYPB-205ENST00000505583 NWD2Q9ULI1 1742 aa8.7□□□□□ -1.02
GYPB-205ENST00000505583 DHX57Q6P158 1386 aaKnown RBP8.7□□□□□ -1.02
GYPB-205ENST00000505583 RAB3GAP2Q9H2M9 1393 aa8.7□□□□□ -1.02
GYPB-205ENST00000505583 DLC1Q96QB1 1528 aa8.7□□□□□ -1.02
GYPB-205ENST00000505583 ADGRB2O60241 1585 aa8.69□□□□□ -1.02
GYPB-205ENST00000505583 ALS2Q96Q42 1657 aa8.69□□□□□ -1.02
GYPB-205ENST00000505583 PMFBP1Q8TBY8 1022 aa8.69□□□□□ -1.02
GYPB-205ENST00000505583 CRYBG1Q9Y4K1 1723 aa8.68□□□□□ -1.02
GYPB-205ENST00000505583 LMOD2Q6P5Q4 547 aa8.68□□□□□ -1.02
GYPB-205ENST00000505583 HIRIP3Q9BW71 556 aaPredicted RBP8.68□□□□□ -1.02
GYPB-205ENST00000505583 PRR36Q9H6K5 1346 aa8.68□□□□□ -1.02
GYPB-205ENST00000505583 SBNO1A3KN83 1393 aa8.68□□□□□ -1.02
GYPB-205ENST00000505583 FAM83GA6ND36 823 aa8.67□□□□□ -1.02
GYPB-205ENST00000505583 PSME1Q06323 249 aa8.67□□□□□ -1.02
GYPB-205ENST00000505583 DEFB132Q7Z7B7 95 aa8.67□□□□□ -1.02
GYPB-205ENST00000505583 SEPT12Q8IYM1 358 aa8.67□□□□□ -1.02
GYPB-205ENST00000505583 TRAK1Q9UPV9 953 aa8.67□□□□□ -1.02
GYPB-205ENST00000505583 U3KPZ7 1027 aaPredicted RBP8.67□□□□□ -1.02
GYPB-205ENST00000505583 ARHGEF28Q8N1W1 1705 aaKnown RBP8.66□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 8.2 ms