RNA–Protein interactions for RNA: ENST00000505526.1

PDCD6-203, Transcript of programmed cell death 6, humanhuman

TSL 1 (best)

Gene PDCD6, Length 1,484 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD6-203ENST00000505526 PRAG1Q86YV5 1406 aa23.23■■□□□ 1.31
PDCD6-203ENST00000505526 RPGRIP1LQ68CZ1 1315 aa23.21■■□□□ 1.31
PDCD6-203ENST00000505526 COL22A1Q8NFW1 1626 aaPredicted RBP23.2■■□□□ 1.3
PDCD6-203ENST00000505526 ATRNO75882 1429 aa23.19■■□□□ 1.3
PDCD6-203ENST00000505526 ESCO1Q5FWF5 840 aa23.17■■□□□ 1.3
PDCD6-203ENST00000505526 NPHP3Q7Z494 1330 aa23.17■■□□□ 1.3
PDCD6-203ENST00000505526 MYOM2P54296 1465 aa23.16■■□□□ 1.3
PDCD6-203ENST00000505526 PPLO60437 1756 aa23.14■■□□□ 1.29
PDCD6-203ENST00000505526 CDC42BPGQ6DT37 1551 aa23.13■■□□□ 1.29
PDCD6-203ENST00000505526 HRCP23327 699 aa23.13■■□□□ 1.29
PDCD6-203ENST00000505526 FOXD1Q16676 465 aa23.13■■□□□ 1.29
PDCD6-203ENST00000505526 BCL9LQ86UU0 1499 aa23.13■■□□□ 1.29
PDCD6-203ENST00000505526 PXDNQ92626 1479 aa23.13■■□□□ 1.29
PDCD6-203ENST00000505526 ZRANB1Q9UGI0 708 aa23.12■■□□□ 1.29
PDCD6-203ENST00000505526 FOXO3O43524 673 aa23.11■■□□□ 1.29
PDCD6-203ENST00000505526 XPCQ01831 940 aaPredicted RBP23.11■■□□□ 1.29
PDCD6-203ENST00000505526 SLC4A1APQ9BWU0 796 aaKnown RBP23.11■■□□□ 1.29
PDCD6-203ENST00000505526 SRCAPQ6ZRS2 3230 aa23.1■■□□□ 1.29
PDCD6-203ENST00000505526 CCDC125Q86Z20 511 aa23.1■■□□□ 1.29
PDCD6-203ENST00000505526 LRPPRCP42704 1394 aaKnown RBP23.08■■□□□ 1.29
PDCD6-203ENST00000505526 MARF1Q9Y4F3 1742 aaKnown RBP23.08■■□□□ 1.29
PDCD6-203ENST00000505526 GJD4Q96KN9 370 aaPredicted RBP23.08■■□□□ 1.29
PDCD6-203ENST00000505526 ACIN1Q9UKV3 1341 aaKnown RBP23.07■■□□□ 1.28
PDCD6-203ENST00000505526 NUTM2FA1L443 756 aa23.06■■□□□ 1.28
PDCD6-203ENST00000505526 STK26Q9P289 416 aa23.06■■□□□ 1.28
PDCD6-203ENST00000505526 ADGRF5Q8IZF2 1346 aa23.06■■□□□ 1.28
PDCD6-203ENST00000505526 WAPLQ7Z5K2 1190 aa23.05■■□□□ 1.28
PDCD6-203ENST00000505526 TECPR2O15040 1411 aa23.03■■□□□ 1.28
PDCD6-203ENST00000505526 EP400Q96L91 3159 aa23.02■■□□□ 1.28
PDCD6-203ENST00000505526 RGL3Q3MIN7 710 aa23.01■■□□□ 1.27
PDCD6-203ENST00000505526 UNC5CLQ8IV45 518 aa23.01■■□□□ 1.27
PDCD6-203ENST00000505526 TNKS1BP1Q9C0C2 1729 aaKnown RBP23.01■■□□□ 1.27
PDCD6-203ENST00000505526 SPATA31A3Q5VYP0 1347 aa23■■□□□ 1.27
PDCD6-203ENST00000505526 ABCC11Q96J66 1382 aa23■■□□□ 1.27
PDCD6-203ENST00000505526 PLEKHH1Q9ULM0 1364 aa23■■□□□ 1.27
PDCD6-203ENST00000505526 RALGAPBQ86X10 1494 aa22.99■■□□□ 1.27
PDCD6-203ENST00000505526 SLIT2O94813 1529 aa22.99■■□□□ 1.27
PDCD6-203ENST00000505526 CCDC144AA2RUR9 1427 aa22.99■■□□□ 1.27
PDCD6-203ENST00000505526 TMEM132EQ6IEE7 984 aa22.98■■□□□ 1.27
PDCD6-203ENST00000505526 ANKRD30BQ9BXX2 1392 aa22.98■■□□□ 1.27
PDCD6-203ENST00000505526 GLI3P10071 1580 aa22.98■■□□□ 1.27
PDCD6-203ENST00000505526 MPHOSPH9Q99550 1183 aa22.97■■□□□ 1.27
PDCD6-203ENST00000505526 BLMP54132 1417 aaPredicted RBP22.96■■□□□ 1.27
PDCD6-203ENST00000505526 SPATA31E1Q6ZUB1 1445 aa22.96■■□□□ 1.27
PDCD6-203ENST00000505526 FMN2Q9NZ56 1722 aa22.96■■□□□ 1.27
PDCD6-203ENST00000505526 KRT28Q7Z3Y7 464 aa22.96■■□□□ 1.27
PDCD6-203ENST00000505526 KIF1AQ12756 1690 aa22.96■■□□□ 1.27
PDCD6-203ENST00000505526 KNDC1Q76NI1 1749 aa22.96■■□□□ 1.27
PDCD6-203ENST00000505526 DHX57Q6P158 1386 aaKnown RBP22.95■■□□□ 1.26
PDCD6-203ENST00000505526 USP32Q8NFA0 1604 aa22.94■■□□□ 1.26
PDCD6-203ENST00000505526 IFT172Q9UG01 1749 aa22.94■■□□□ 1.26
PDCD6-203ENST00000505526 PIK3C2GO75747 1445 aa22.92■■□□□ 1.26
PDCD6-203ENST00000505526 YTHDC2Q9H6S0 1430 aaKnown RBP22.92■■□□□ 1.26
PDCD6-203ENST00000505526 HAP1P54257 671 aaPredicted RBP22.92■■□□□ 1.26
PDCD6-203ENST00000505526 PSME1Q06323 249 aa22.9■■□□□ 1.26
PDCD6-203ENST00000505526 DEFB132Q7Z7B7 95 aa22.9■■□□□ 1.26
PDCD6-203ENST00000505526 SEPT12Q8IYM1 358 aa22.9■■□□□ 1.26
PDCD6-203ENST00000505526 SIRT1Q96EB6 747 aa22.9■■□□□ 1.26
PDCD6-203ENST00000505526 PHF8Q9UPP1 1060 aa22.9■■□□□ 1.26
PDCD6-203ENST00000505526 BRWD3Q6RI45 1802 aa22.89■■□□□ 1.26
PDCD6-203ENST00000505526 TNS3Q68CZ2 1445 aa22.89■■□□□ 1.26
PDCD6-203ENST00000505526 SF3B2Q13435 895 aaKnown RBP22.89■■□□□ 1.25
PDCD6-203ENST00000505526 VPS72Q15906 364 aa22.89■■□□□ 1.25
PDCD6-203ENST00000505526 CABLES1Q8TDN4 633 aa22.89■■□□□ 1.25
PDCD6-203ENST00000505526 PLEKHG5O94827 1062 aa22.87■■□□□ 1.25
PDCD6-203ENST00000505526 CCER1Q8TC90 406 aaPredicted RBP22.86■■□□□ 1.25
PDCD6-203ENST00000505526 CCDC9Q9Y3X0 531 aaKnown RBP22.86■■□□□ 1.25
PDCD6-203ENST00000505526 RGPD8O14715 1765 aaPredicted RBP22.86■■□□□ 1.25
PDCD6-203ENST00000505526 ONECUT3O60422 494 aaPredicted RBP22.85■■□□□ 1.25
PDCD6-203ENST00000505526 LMOD2Q6P5Q4 547 aa22.85■■□□□ 1.25
PDCD6-203ENST00000505526 C14orf93Q9H972 538 aaKnown RBP22.85■■□□□ 1.25
PDCD6-203ENST00000505526 SBNO1A3KN83 1393 aa22.84■■□□□ 1.25
PDCD6-203ENST00000505526 PLCH1Q4KWH8 1693 aa22.84■■□□□ 1.25
PDCD6-203ENST00000505526 KRT27Q7Z3Y8 459 aa22.83■■□□□ 1.25
PDCD6-203ENST00000505526 NWD2Q9ULI1 1742 aa22.83■■□□□ 1.24
PDCD6-203ENST00000505526 NRXN1Q9ULB1 1477 aa22.83■■□□□ 1.24
PDCD6-203ENST00000505526 ARHGEF10O15013 1369 aa22.82■■□□□ 1.24
PDCD6-203ENST00000505526 CFAP70Q5T0N1 1121 aa22.81■■□□□ 1.24
PDCD6-203ENST00000505526 SAFB2Q14151 953 aaKnown RBP eCLIP22.8■■□□□ 1.243e-8■■□□□ 13.6
PDCD6-203ENST00000505526 ABCA3Q99758 1704 aa22.8■■□□□ 1.24
PDCD6-203ENST00000505526 FAM83GA6ND36 823 aa22.79■■□□□ 1.24
PDCD6-203ENST00000505526 PRAM1Q96QH2 718 aa22.79■■□□□ 1.24
PDCD6-203ENST00000505526 PMFBP1Q8TBY8 1022 aa22.78■■□□□ 1.24
PDCD6-203ENST00000505526 A0A0G2JS52 829 aa22.77■■□□□ 1.24
PDCD6-203ENST00000505526 MYT1Q01538 1121 aa22.77■■□□□ 1.24
PDCD6-203ENST00000505526 POGKQ9P215 609 aa22.75■■□□□ 1.23
PDCD6-203ENST00000505526 LRP5O75197 1615 aa22.75■■□□□ 1.23
PDCD6-203ENST00000505526 ANKARQ7Z5J8 1434 aa22.75■■□□□ 1.23
PDCD6-203ENST00000505526 BAG6P46379 1132 aa22.74■■□□□ 1.23
PDCD6-203ENST00000505526 FAM98CQ17RN3 349 aaKnown RBP22.73■■□□□ 1.23
PDCD6-203ENST00000505526 BTG4Q9NY30 223 aa22.73■■□□□ 1.23
PDCD6-203ENST00000505526 CLSPNQ9HAW4 1339 aa22.72■■□□□ 1.23
PDCD6-203ENST00000505526 DLC1Q96QB1 1528 aa22.72■■□□□ 1.23
PDCD6-203ENST00000505526 NRAPQ86VF7 1730 aa22.72■■□□□ 1.23
PDCD6-203ENST00000505526 PSDA5PKW4 1024 aaPredicted RBP22.72■■□□□ 1.23
PDCD6-203ENST00000505526 TRPM3Q9HCF6 1732 aaPredicted RBP22.69■■□□□ 1.22
PDCD6-203ENST00000505526 ADGRB2O60241 1585 aa22.69■■□□□ 1.22
PDCD6-203ENST00000505526 GPRASP1Q5JY77 1395 aa22.68■■□□□ 1.22
PDCD6-203ENST00000505526 HIRIP3Q9BW71 556 aaPredicted RBP22.68■■□□□ 1.22
PDCD6-203ENST00000505526 COL14A1Q05707 1796 aaKnown RBP22.68■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 88.6 ms