RNA–Protein interactions for RNA: ENST00000505065.1

CDC42SE2-208, Transcript of CDC42 small effector 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42SE2, Length 4,352 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-208ENST00000505065 CFAP70Q5T0N1 1121 aa11.99□□□□□ -0.49
CDC42SE2-208ENST00000505065 PHRF1Q9P1Y6 1649 aaKnown RBP11.98□□□□□ -0.49
CDC42SE2-208ENST00000505065 KIF20BQ96Q89 1820 aa11.98□□□□□ -0.49
CDC42SE2-208ENST00000505065 ZNF326Q5BKZ1 582 aaKnown RBP11.98□□□□□ -0.49
CDC42SE2-208ENST00000505065 PLEKHH1Q9ULM0 1364 aa11.98□□□□□ -0.49
CDC42SE2-208ENST00000505065 PUS7Q96PZ0 661 aaKnown RBP11.97□□□□□ -0.49
CDC42SE2-208ENST00000505065 CD163L1Q9NR16 1453 aa11.97□□□□□ -0.49
CDC42SE2-208ENST00000505065 RGL3Q3MIN7 710 aa11.97□□□□□ -0.49
CDC42SE2-208ENST00000505065 ZNF335Q9H4Z2 1342 aaPredicted RBP11.96□□□□□ -0.49
CDC42SE2-208ENST00000505065 NBPF1Q3BBV0 1214 aa11.96□□□□□ -0.49
CDC42SE2-208ENST00000505065 CCER1Q8TC90 406 aaPredicted RBP11.96□□□□□ -0.49
CDC42SE2-208ENST00000505065 STAG3Q9UJ98 1225 aa11.96□□□□□ -0.49
CDC42SE2-208ENST00000505065 AEBP2Q6ZN18 517 aaPredicted RBP11.96□□□□□ -0.49
CDC42SE2-208ENST00000505065 ROCK2O75116 1388 aaKnown RBP11.96□□□□□ -0.5
CDC42SE2-208ENST00000505065 TESK2Q96S53 571 aa11.95□□□□□ -0.5
CDC42SE2-208ENST00000505065 EIF3AQ14152 1382 aaKnown RBP11.94□□□□□ -0.5
CDC42SE2-208ENST00000505065 PXDNQ92626 1479 aa11.94□□□□□ -0.5
CDC42SE2-208ENST00000505065 AMOTL2Q9Y2J4 779 aa11.93□□□□□ -0.5
CDC42SE2-208ENST00000505065 SSH2Q76I76 1423 aa11.93□□□□□ -0.5
CDC42SE2-208ENST00000505065 PIK3C2AO00443 1686 aa11.93□□□□□ -0.5
CDC42SE2-208ENST00000505065 TMEM94Q12767 1356 aa11.93□□□□□ -0.5
CDC42SE2-208ENST00000505065 PHLPP1O60346 1717 aa11.93□□□□□ -0.5
CDC42SE2-208ENST00000505065 USP47Q96K76 1375 aa11.93□□□□□ -0.5
CDC42SE2-208ENST00000505065 CHGAP10645 457 aaKnown RBP11.93□□□□□ -0.5
CDC42SE2-208ENST00000505065 NEUROD1Q13562 356 aa11.93□□□□□ -0.5
CDC42SE2-208ENST00000505065 SLC26A8Q96RN1 970 aa11.92□□□□□ -0.5
CDC42SE2-208ENST00000505065 C1orf167Q5SNV9 1468 aa11.92□□□□□ -0.5
CDC42SE2-208ENST00000505065 NUTM2DQ5VT03 806 aaPredicted RBP11.91□□□□□ -0.5
CDC42SE2-208ENST00000505065 POLR3AO14802 1390 aaPredicted RBP11.91□□□□□ -0.5
CDC42SE2-208ENST00000505065 CPSF1Q10570 1443 aaKnown RBP11.91□□□□□ -0.5
CDC42SE2-208ENST00000505065 PLPPR3Q6T4P5 718 aa11.9□□□□□ -0.5
CDC42SE2-208ENST00000505065 NINLQ9Y2I6 1382 aa11.88□□□□□ -0.51
CDC42SE2-208ENST00000505065 TMEM132EQ6IEE7 984 aa11.88□□□□□ -0.51
CDC42SE2-208ENST00000505065 ZEB1P37275 1124 aaPredicted RBP11.88□□□□□ -0.51
CDC42SE2-208ENST00000505065 BRD4O60885 1362 aaPredicted RBP11.87□□□□□ -0.51
CDC42SE2-208ENST00000505065 SLIT3O75094 1523 aa11.87□□□□□ -0.51
CDC42SE2-208ENST00000505065 ABCC6O95255 1503 aa11.87□□□□□ -0.51
CDC42SE2-208ENST00000505065 TNKS1BP1Q9C0C2 1729 aaKnown RBP11.87□□□□□ -0.51
CDC42SE2-208ENST00000505065 COL18A1P39060 1754 aa11.87□□□□□ -0.51
CDC42SE2-208ENST00000505065 KDM2AQ9Y2K7 1162 aa11.86□□□□□ -0.51
CDC42SE2-208ENST00000505065 DISP3Q9P2K9 1392 aa11.86□□□□□ -0.51
CDC42SE2-208ENST00000505065 CENPJQ9HC77 1338 aaPredicted RBP11.86□□□□□ -0.51
CDC42SE2-208ENST00000505065 CAMTA1Q9Y6Y1 1673 aa11.85□□□□□ -0.51
CDC42SE2-208ENST00000505065 WNK3Q9BYP7 1800 aa11.85□□□□□ -0.51
CDC42SE2-208ENST00000505065 NRAPQ86VF7 1730 aa11.84□□□□□ -0.51
CDC42SE2-208ENST00000505065 PRR36Q9H6K5 1346 aa11.84□□□□□ -0.51
CDC42SE2-208ENST00000505065 LMO7Q8WWI1 1683 aa11.84□□□□□ -0.51
CDC42SE2-208ENST00000505065 CERKQ8TCT0 537 aa11.84□□□□□ -0.51
CDC42SE2-208ENST00000505065 C19orf44Q9H6X5 657 aa11.84□□□□□ -0.51
CDC42SE2-208ENST00000505065 PRAM1Q96QH2 718 aa11.83□□□□□ -0.51
CDC42SE2-208ENST00000505065 SLC24A1O60721 1099 aa11.83□□□□□ -0.52
CDC42SE2-208ENST00000505065 MSH6P52701 1360 aa11.83□□□□□ -0.52
CDC42SE2-208ENST00000505065 NWD2Q9ULI1 1742 aa11.82□□□□□ -0.52
CDC42SE2-208ENST00000505065 CARD11Q9BXL7 1154 aa11.82□□□□□ -0.52
CDC42SE2-208ENST00000505065 WASLO00401 505 aaPredicted RBP11.81□□□□□ -0.52
CDC42SE2-208ENST00000505065 WAPLQ7Z5K2 1190 aa11.81□□□□□ -0.52
CDC42SE2-208ENST00000505065 LTN1O94822 1766 aa11.81□□□□□ -0.52
CDC42SE2-208ENST00000505065 NFAT5O94916 1531 aa11.81□□□□□ -0.52
CDC42SE2-208ENST00000505065 PLEKHG3A1L390 1219 aa11.81□□□□□ -0.52
CDC42SE2-208ENST00000505065 ATAD2Q6PL18 1390 aa11.8□□□□□ -0.52
CDC42SE2-208ENST00000505065 PLCH1Q4KWH8 1693 aa11.8□□□□□ -0.52
CDC42SE2-208ENST00000505065 FAM208AQ9UK61 1670 aaKnown RBP11.79□□□□□ -0.52
CDC42SE2-208ENST00000505065 SBNO1A3KN83 1393 aa11.79□□□□□ -0.52
CDC42SE2-208ENST00000505065 TRAK1Q9UPV9 953 aa11.79□□□□□ -0.52
CDC42SE2-208ENST00000505065 HSPA5P11021 654 aaKnown RBP11.78□□□□□ -0.52
CDC42SE2-208ENST00000505065 USP6P35125 1406 aa11.78□□□□□ -0.52
CDC42SE2-208ENST00000505065 ST20-MTHFSA0A0A6YYL1 179 aa11.78□□□□□ -0.52
CDC42SE2-208ENST00000505065 RGPD1P0DJD0 1748 aa11.78□□□□□ -0.52
CDC42SE2-208ENST00000505065 PROSER2Q86WR7 435 aaPredicted RBP11.77□□□□□ -0.52
CDC42SE2-208ENST00000505065 PPIP5K1Q6PFW1 1433 aa11.77□□□□□ -0.52
CDC42SE2-208ENST00000505065 SOS2Q07890 1332 aaPredicted RBP11.77□□□□□ -0.53
CDC42SE2-208ENST00000505065 CCDC7Q96M83 1385 aa11.77□□□□□ -0.53
CDC42SE2-208ENST00000505065 CADPS2Q86UW7 1296 aa11.77□□□□□ -0.53
CDC42SE2-208ENST00000505065 ANKRD36BQ8N2N9 1353 aa11.76□□□□□ -0.53
CDC42SE2-208ENST00000505065 C11orf95C9JLR9 678 aaPredicted RBP11.76□□□□□ -0.53
CDC42SE2-208ENST00000505065 PEAK1Q9H792 1746 aa11.76□□□□□ -0.53
CDC42SE2-208ENST00000505065 USP31Q70CQ4 1352 aa11.76□□□□□ -0.53
CDC42SE2-208ENST00000505065 NPC1L1Q9UHC9 1359 aa11.76□□□□□ -0.53
CDC42SE2-208ENST00000505065 EVC2Q86UK5 1308 aa11.76□□□□□ -0.53
CDC42SE2-208ENST00000505065 SMG6Q86US8 1419 aaKnown RBP11.76□□□□□ -0.53
CDC42SE2-208ENST00000505065 EIF4G2P78344 907 aaKnown RBP eCLIP11.76□□□□□ -0.53
CDC42SE2-208ENST00000505065 OVOS2A0A0J9YW53 1432 aa11.75□□□□□ -0.53
CDC42SE2-208ENST00000505065 OVOS2Q6IE36 1432 aa11.75□□□□□ -0.53
CDC42SE2-208ENST00000505065 COL14A1Q05707 1796 aaKnown RBP11.75□□□□□ -0.53
CDC42SE2-208ENST00000505065 EDC4Q6P2E9 1401 aaKnown RBP11.75□□□□□ -0.53
CDC42SE2-208ENST00000505065 BRINP3Q76B58 766 aa11.74□□□□□ -0.53
CDC42SE2-208ENST00000505065 CDK19Q9BWU1 502 aa11.74□□□□□ -0.53
CDC42SE2-208ENST00000505065 RGPD5Q99666 1765 aa11.74□□□□□ -0.53
CDC42SE2-208ENST00000505065 TNS3Q68CZ2 1445 aa11.73□□□□□ -0.53
CDC42SE2-208ENST00000505065 WASHC2AQ641Q2 1341 aa11.73□□□□□ -0.53
CDC42SE2-208ENST00000505065 STK26Q9P289 416 aa11.73□□□□□ -0.53
CDC42SE2-208ENST00000505065 KIF7Q2M1P5 1343 aa11.72□□□□□ -0.53
CDC42SE2-208ENST00000505065 MAP2P11137 1827 aaKnown RBP11.72□□□□□ -0.53
CDC42SE2-208ENST00000505065 SLAIN2Q9P270 581 aa11.72□□□□□ -0.53
CDC42SE2-208ENST00000505065 A0A1W2PP64 1363 aa11.72□□□□□ -0.53
CDC42SE2-208ENST00000505065 USP19O94966 1318 aa11.71□□□□□ -0.54
CDC42SE2-208ENST00000505065 NUDT16Q96DE0 195 aaKnown RBP11.7□□□□□ -0.54
CDC42SE2-208ENST00000505065 MINK1Q8N4C8 1332 aaPredicted RBP11.69□□□□□ -0.54
CDC42SE2-208ENST00000505065 TMF1P82094 1093 aa11.69□□□□□ -0.54
CDC42SE2-208ENST00000505065 CCDC61Q9Y6R9 512 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms