RNA–Protein interactions for RNA: ENST00000504951.6

GYPB-204, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 632 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-204ENST00000504951 PPP1R15AO75807 674 aaPredicted RBP9.49□□□□□ -0.89
GYPB-204ENST00000504951 C14orf37Q86TY3 774 aa9.49□□□□□ -0.89
GYPB-204ENST00000504951 AMOTL2Q9Y2J4 779 aa9.49□□□□□ -0.89
GYPB-204ENST00000504951 TMEM131LA2VDJ0 1609 aa9.49□□□□□ -0.89
GYPB-204ENST00000504951 PNPLA6Q8IY17 1366 aa9.49□□□□□ -0.89
GYPB-204ENST00000504951 DAPK1P53355 1430 aa9.48□□□□□ -0.89
GYPB-204ENST00000504951 ASXL1Q8IXJ9 1541 aa9.48□□□□□ -0.89
GYPB-204ENST00000504951 NUTM2BA6NNL0 878 aaPredicted RBP9.48□□□□□ -0.89
GYPB-204ENST00000504951 NUTM2EB1AL46 878 aaPredicted RBP9.48□□□□□ -0.89
GYPB-204ENST00000504951 KANK4Q5T7N3 995 aaPredicted RBP9.48□□□□□ -0.89
GYPB-204ENST00000504951 NUTM2AQ8IVF1 878 aaPredicted RBP9.48□□□□□ -0.89
GYPB-204ENST00000504951 TRPC5Q9UL62 973 aaPredicted RBP9.48□□□□□ -0.89
GYPB-204ENST00000504951 NHSL1Q5SYE7 1610 aa9.48□□□□□ -0.89
GYPB-204ENST00000504951 MST1RQ04912 1400 aa9.48□□□□□ -0.89
GYPB-204ENST00000504951 VPS8Q8N3P4 1428 aa9.48□□□□□ -0.89
GYPB-204ENST00000504951 NUTM2DQ5VT03 806 aaPredicted RBP9.47□□□□□ -0.89
GYPB-204ENST00000504951 CROCC2H7BZ55 1655 aa9.47□□□□□ -0.89
GYPB-204ENST00000504951 PTCH1Q13635 1447 aa9.47□□□□□ -0.89
GYPB-204ENST00000504951 ADGRL2O95490 1459 aa9.47□□□□□ -0.89
GYPB-204ENST00000504951 TRPM2O94759 1503 aa9.46□□□□□ -0.89
GYPB-204ENST00000504951 LAMC1P11047 1609 aa9.46□□□□□ -0.89
GYPB-204ENST00000504951 PTPN23Q9H3S7 1636 aa9.46□□□□□ -0.89
GYPB-204ENST00000504951 C8orf37Q96NL8 207 aa9.46□□□□□ -0.9
GYPB-204ENST00000504951 SOS2Q07890 1332 aaPredicted RBP9.46□□□□□ -0.9
GYPB-204ENST00000504951 PTPRUQ92729 1446 aa9.46□□□□□ -0.9
GYPB-204ENST00000504951 ATRNO75882 1429 aa9.45□□□□□ -0.9
GYPB-204ENST00000504951 LHX8Q68G74 356 aa9.44□□□□□ -0.9
GYPB-204ENST00000504951 USP21Q9UK80 565 aa9.44□□□□□ -0.9
GYPB-204ENST00000504951 ADGRL3Q9HAR2 1447 aa9.42□□□□□ -0.9
GYPB-204ENST00000504951 ANKRD50Q9ULJ7 1429 aa9.42□□□□□ -0.9
GYPB-204ENST00000504951 MYO5BQ9ULV0 1848 aa9.42□□□□□ -0.9
GYPB-204ENST00000504951 XRN1Q8IZH2 1706 aaKnown RBP9.42□□□□□ -0.9
GYPB-204ENST00000504951 SETBP1Q9Y6X0 1596 aa9.41□□□□□ -0.9
GYPB-204ENST00000504951 GCC2Q8IWJ2 1684 aa9.41□□□□□ -0.9
GYPB-204ENST00000504951 PRAG1Q86YV5 1406 aa9.4□□□□□ -0.9
GYPB-204ENST00000504951 UNC13BO14795 1591 aa9.4□□□□□ -0.9
GYPB-204ENST00000504951 C1orf167Q5SNV9 1468 aa9.4□□□□□ -0.91
GYPB-204ENST00000504951 BCL9LQ86UU0 1499 aa9.4□□□□□ -0.91
GYPB-204ENST00000504951 BLMP54132 1417 aaPredicted RBP9.39□□□□□ -0.91
GYPB-204ENST00000504951 LOC105371045A0A1W2PR82 267 aa9.39□□□□□ -0.91
GYPB-204ENST00000504951 GJD4Q96KN9 370 aaPredicted RBP9.39□□□□□ -0.91
GYPB-204ENST00000504951 CHIC2Q9UKJ5 165 aa9.39□□□□□ -0.91
GYPB-204ENST00000504951 LRP5O75197 1615 aa9.38□□□□□ -0.91
GYPB-204ENST00000504951 COL22A1Q8NFW1 1626 aaPredicted RBP9.38□□□□□ -0.91
GYPB-204ENST00000504951 EP400Q96L91 3159 aa9.38□□□□□ -0.91
GYPB-204ENST00000504951 ONECUT3O60422 494 aaPredicted RBP9.38□□□□□ -0.91
GYPB-204ENST00000504951 ADAMTS2O95450 1211 aa9.38□□□□□ -0.91
GYPB-204ENST00000504951 NRXN3Q9Y4C0 1643 aa9.38□□□□□ -0.91
GYPB-204ENST00000504951 METP08581 1390 aa9.37□□□□□ -0.91
GYPB-204ENST00000504951 MYOM2P54296 1465 aa9.37□□□□□ -0.91
GYPB-204ENST00000504951 IQGAP3Q86VI3 1631 aa9.36□□□□□ -0.91
GYPB-204ENST00000504951 CHGAP10645 457 aaKnown RBP9.36□□□□□ -0.91
GYPB-204ENST00000504951 DDX17Q92841 729 aaKnown RBP9.36□□□□□ -0.91
GYPB-204ENST00000504951 SPDYE4A6NLX3 237 aa9.35□□□□□ -0.91
GYPB-204ENST00000504951 ZNF579Q8NAF0 562 aaKnown RBP9.35□□□□□ -0.91
GYPB-204ENST00000504951 ROCK1Q13464 1354 aa9.35□□□□□ -0.91
GYPB-204ENST00000504951 NPHP3Q7Z494 1330 aa9.34□□□□□ -0.91
GYPB-204ENST00000504951 SPHKAPQ2M3C7 1700 aa9.34□□□□□ -0.91
GYPB-204ENST00000504951 UNC5CLQ8IV45 518 aa9.34□□□□□ -0.91
GYPB-204ENST00000504951 DCBLD2Q96PD2 775 aa9.34□□□□□ -0.91
GYPB-204ENST00000504951 ORAI2Q96SN7 254 aa9.34□□□□□ -0.91
GYPB-204ENST00000504951 E9PCH4 1651 aa9.34□□□□□ -0.91
GYPB-204ENST00000504951 SLIT2O94813 1529 aa9.33□□□□□ -0.92
GYPB-204ENST00000504951 CREBZFQ9NS37 354 aa9.33□□□□□ -0.92
GYPB-204ENST00000504951 TNKS1BP1Q9C0C2 1729 aaKnown RBP9.33□□□□□ -0.92
GYPB-204ENST00000504951 HFM1A2PYH4 1435 aa9.32□□□□□ -0.92
GYPB-204ENST00000504951 PAK3O75914 559 aaPredicted RBP9.32□□□□□ -0.92
GYPB-204ENST00000504951 SF3B2Q13435 895 aaKnown RBP9.32□□□□□ -0.92
GYPB-204ENST00000504951 LRPPRCP42704 1394 aaKnown RBP9.32□□□□□ -0.92
GYPB-204ENST00000504951 NALCNQ8IZF0 1738 aa9.31□□□□□ -0.92
GYPB-204ENST00000504951 VGFO15240 615 aaPredicted RBP9.31□□□□□ -0.92
GYPB-204ENST00000504951 POTEIP0CG38 1075 aa9.31□□□□□ -0.92
GYPB-204ENST00000504951 HRCP23327 699 aa9.31□□□□□ -0.92
GYPB-204ENST00000504951 RALGAPBQ86X10 1494 aa9.3□□□□□ -0.92
GYPB-204ENST00000504951 PXDNQ92626 1479 aa9.3□□□□□ -0.92
GYPB-204ENST00000504951 NUP155O75694 1391 aa9.3□□□□□ -0.92
GYPB-204ENST00000504951 VPS72Q15906 364 aa9.3□□□□□ -0.92
GYPB-204ENST00000504951 MARF1Q9Y4F3 1742 aaKnown RBP9.3□□□□□ -0.92
GYPB-204ENST00000504951 RPGRIP1LQ68CZ1 1315 aa9.3□□□□□ -0.92
GYPB-204ENST00000504951 ROBO2Q9HCK4 1378 aa9.29□□□□□ -0.92
GYPB-204ENST00000504951 DEFB132Q7Z7B7 95 aa9.29□□□□□ -0.92
GYPB-204ENST00000504951 GLI3P10071 1580 aa9.29□□□□□ -0.92
GYPB-204ENST00000504951 NEXMIFQ5QGS0 1516 aa9.28□□□□□ -0.92
GYPB-204ENST00000504951 BAG6P46379 1132 aa9.28□□□□□ -0.92
GYPB-204ENST00000504951 SEPT12Q8IYM1 358 aa9.28□□□□□ -0.92
GYPB-204ENST00000504951 SPATA31A3Q5VYP0 1347 aa9.28□□□□□ -0.92
GYPB-204ENST00000504951 ZNF326Q5BKZ1 582 aaKnown RBP9.27□□□□□ -0.93
GYPB-204ENST00000504951 KRT27Q7Z3Y8 459 aa9.27□□□□□ -0.93
GYPB-204ENST00000504951 DISP2A7MBM2 1401 aa9.27□□□□□ -0.93
GYPB-204ENST00000504951 ESCO1Q5FWF5 840 aa9.26□□□□□ -0.93
GYPB-204ENST00000504951 CDC42BPGQ6DT37 1551 aa9.25□□□□□ -0.93
GYPB-204ENST00000504951 FOXO3O43524 673 aa9.25□□□□□ -0.93
GYPB-204ENST00000504951 FAM50AQ14320 339 aaKnown RBP9.25□□□□□ -0.93
GYPB-204ENST00000504951 SIRT1Q96EB6 747 aa9.25□□□□□ -0.93
GYPB-204ENST00000504951 TECPR2O15040 1411 aa9.24□□□□□ -0.93
GYPB-204ENST00000504951 BRWD3Q6RI45 1802 aa9.24□□□□□ -0.93
GYPB-204ENST00000504951 NWD2Q9ULI1 1742 aa9.23□□□□□ -0.93
GYPB-204ENST00000504951 SBNO1A3KN83 1393 aa9.23□□□□□ -0.93
GYPB-204ENST00000504951 ABCC11Q96J66 1382 aa9.23□□□□□ -0.93
GYPB-204ENST00000504951 CCDC144AA2RUR9 1427 aa9.22□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms