RNA–Protein interactions for RNA: ENST00000503784.1

RFC1-206, Transcript of replication factor C subunit 1, humanhuman

TSL 3

Gene RFC1, Length 504 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-206ENST00000503784 SPDYE2BA6NHP3 402 aa10.9□□□□□ -0.66
RFC1-206ENST00000503784 SPDYE6P0CI01 402 aa10.9□□□□□ -0.66
RFC1-206ENST00000503784 SPDYE2Q495Y8 402 aa10.9□□□□□ -0.66
RFC1-206ENST00000503784 LHX8Q68G74 356 aa10.9□□□□□ -0.66
RFC1-206ENST00000503784 CCDC125Q86Z20 511 aa10.9□□□□□ -0.66
RFC1-206ENST00000503784 ABCF1Q8NE71 845 aaKnown RBP eCLIP10.9□□□□□ -0.66
RFC1-206ENST00000503784 PIK3R4Q99570 1358 aa10.9□□□□□ -0.67
RFC1-206ENST00000503784 TRPM2O94759 1503 aa10.89□□□□□ -0.67
RFC1-206ENST00000503784 GCC2Q8IWJ2 1684 aa10.89□□□□□ -0.67
RFC1-206ENST00000503784 PSDA5PKW4 1024 aaPredicted RBP10.88□□□□□ -0.67
RFC1-206ENST00000503784 GABBR2O75899 941 aa10.88□□□□□ -0.67
RFC1-206ENST00000503784 DAPK1P53355 1430 aa10.88□□□□□ -0.67
RFC1-206ENST00000503784 KANK4Q5T7N3 995 aaPredicted RBP10.88□□□□□ -0.67
RFC1-206ENST00000503784 CROCC2H7BZ55 1655 aa10.88□□□□□ -0.67
RFC1-206ENST00000503784 TMEM131LA2VDJ0 1609 aa10.87□□□□□ -0.67
RFC1-206ENST00000503784 BLMP54132 1417 aaPredicted RBP10.87□□□□□ -0.67
RFC1-206ENST00000503784 FNBP4Q8N3X1 1017 aaPredicted RBP10.87□□□□□ -0.67
RFC1-206ENST00000503784 SLC4A1APQ9BWU0 796 aaKnown RBP10.87□□□□□ -0.67
RFC1-206ENST00000503784 ANKRD30AQ9BXX3 1397 aa10.87□□□□□ -0.67
RFC1-206ENST00000503784 LRP5O75197 1615 aa10.87□□□□□ -0.67
RFC1-206ENST00000503784 MYO5BQ9ULV0 1848 aa10.86□□□□□ -0.67
RFC1-206ENST00000503784 SF3B2Q13435 895 aaKnown RBP10.86□□□□□ -0.67
RFC1-206ENST00000503784 RPRD2Q5VT52 1461 aaKnown RBP10.86□□□□□ -0.67
RFC1-206ENST00000503784 PTCH1Q13635 1447 aa10.85□□□□□ -0.67
RFC1-206ENST00000503784 ADGRL3Q9HAR2 1447 aa10.84□□□□□ -0.67
RFC1-206ENST00000503784 C1orf167Q5SNV9 1468 aa10.84□□□□□ -0.67
RFC1-206ENST00000503784 BCL9LQ86UU0 1499 aa10.83□□□□□ -0.68
RFC1-206ENST00000503784 SPDYE1Q8NFV5 336 aaPredicted RBP10.83□□□□□ -0.68
RFC1-206ENST00000503784 GJD4Q96KN9 370 aaPredicted RBP10.83□□□□□ -0.68
RFC1-206ENST00000503784 CLEC11AQ9Y240 323 aa10.83□□□□□ -0.68
RFC1-206ENST00000503784 XRN1Q8IZH2 1706 aaKnown RBP10.83□□□□□ -0.68
RFC1-206ENST00000503784 UNC13BO14795 1591 aa10.82□□□□□ -0.68
RFC1-206ENST00000503784 METP08581 1390 aa10.82□□□□□ -0.68
RFC1-206ENST00000503784 HRCP23327 699 aa10.82□□□□□ -0.68
RFC1-206ENST00000503784 ORAI2Q96SN7 254 aa10.82□□□□□ -0.68
RFC1-206ENST00000503784 PTPN23Q9H3S7 1636 aa10.82□□□□□ -0.68
RFC1-206ENST00000503784 SOS2Q07890 1332 aaPredicted RBP10.82□□□□□ -0.68
RFC1-206ENST00000503784 MYOM2P54296 1465 aa10.81□□□□□ -0.68
RFC1-206ENST00000503784 YY1P25490 414 aa10.8□□□□□ -0.68
RFC1-206ENST00000503784 NALCNQ8IZF0 1738 aa10.8□□□□□ -0.68
RFC1-206ENST00000503784 RALGAPBQ86X10 1494 aa10.8□□□□□ -0.68
RFC1-206ENST00000503784 VPS8Q8N3P4 1428 aa10.79□□□□□ -0.68
RFC1-206ENST00000503784 XPCQ01831 940 aaPredicted RBP10.79□□□□□ -0.68
RFC1-206ENST00000503784 ANKRD50Q9ULJ7 1429 aa10.78□□□□□ -0.68
RFC1-206ENST00000503784 NRXN3Q9Y4C0 1643 aa10.78□□□□□ -0.68
RFC1-206ENST00000503784 R3HDM1Q15032 1099 aaKnown RBP10.77□□□□□ -0.69
RFC1-206ENST00000503784 ZNF326Q5BKZ1 582 aaKnown RBP10.77□□□□□ -0.69
RFC1-206ENST00000503784 SEPT12Q8IYM1 358 aa10.77□□□□□ -0.69
RFC1-206ENST00000503784 GLI3P10071 1580 aa10.77□□□□□ -0.69
RFC1-206ENST00000503784 A0A0G2JS52 829 aa10.76□□□□□ -0.69
RFC1-206ENST00000503784 BAG6P46379 1132 aa10.76□□□□□ -0.69
RFC1-206ENST00000503784 MYT1Q01538 1121 aa10.76□□□□□ -0.69
RFC1-206ENST00000503784 UNC5CLQ8IV45 518 aa10.76□□□□□ -0.69
RFC1-206ENST00000503784 CCDC9Q9Y3X0 531 aaKnown RBP10.76□□□□□ -0.69
RFC1-206ENST00000503784 COL22A1Q8NFW1 1626 aaPredicted RBP10.76□□□□□ -0.69
RFC1-206ENST00000503784 LAMC1P11047 1609 aa10.75□□□□□ -0.69
RFC1-206ENST00000503784 ADGRL2O95490 1459 aa10.74□□□□□ -0.69
RFC1-206ENST00000503784 PLEKHG5O94827 1062 aa10.74□□□□□ -0.69
RFC1-206ENST00000503784 NPHP3Q7Z494 1330 aa10.74□□□□□ -0.69
RFC1-206ENST00000503784 ESCO1Q5FWF5 840 aa10.73□□□□□ -0.69
RFC1-206ENST00000503784 KRT27Q7Z3Y8 459 aa10.73□□□□□ -0.69
RFC1-206ENST00000503784 ROBO2Q9HCK4 1378 aa10.73□□□□□ -0.69
RFC1-206ENST00000503784 PXDNQ92626 1479 aa10.73□□□□□ -0.69
RFC1-206ENST00000503784 E9PCH4 1651 aa10.73□□□□□ -0.69
RFC1-206ENST00000503784 ZBTB22O15209 634 aa10.72□□□□□ -0.69
RFC1-206ENST00000503784 FOXO3O43524 673 aa10.72□□□□□ -0.69
RFC1-206ENST00000503784 ATXN8OSP0DMR3 200 aa10.72□□□□□ -0.69
RFC1-206ENST00000503784 EN1Q05925 392 aaPredicted RBP10.72□□□□□ -0.69
RFC1-206ENST00000503784 FAM50AQ14320 339 aaKnown RBP10.72□□□□□ -0.69
RFC1-206ENST00000503784 SLIT2O94813 1529 aa10.72□□□□□ -0.69
RFC1-206ENST00000503784 SSUH2Q9Y2M2 353 aa10.71□□□□□ -0.69
RFC1-206ENST00000503784 NUTM2FA1L443 756 aa10.7□□□□□ -0.7
RFC1-206ENST00000503784 HAP1P54257 671 aaPredicted RBP10.7□□□□□ -0.7
RFC1-206ENST00000503784 CHADLQ6NUI6 762 aa10.7□□□□□ -0.7
RFC1-206ENST00000503784 BRWD3Q6RI45 1802 aa10.7□□□□□ -0.7
RFC1-206ENST00000503784 SPHKAPQ2M3C7 1700 aa10.7□□□□□ -0.7
RFC1-206ENST00000503784 TNKS1BP1Q9C0C2 1729 aaKnown RBP10.7□□□□□ -0.7
RFC1-206ENST00000503784 MKRN4PQ13434 485 aaPredicted RBP10.69□□□□□ -0.7
RFC1-206ENST00000503784 FAM182BQ5T319 152 aa10.69□□□□□ -0.7
RFC1-206ENST00000503784 MARF1Q9Y4F3 1742 aaKnown RBP10.68□□□□□ -0.7
RFC1-206ENST00000503784 POTEIP0CG38 1075 aa10.68□□□□□ -0.7
RFC1-206ENST00000503784 VPS72Q15906 364 aa10.68□□□□□ -0.7
RFC1-206ENST00000503784 ZNF692Q9BU19 519 aaPredicted RBP10.68□□□□□ -0.7
RFC1-206ENST00000503784 IQGAP3Q86VI3 1631 aa10.68□□□□□ -0.7
RFC1-206ENST00000503784 NUP155O75694 1391 aa10.67□□□□□ -0.7
RFC1-206ENST00000503784 USP32Q8NFA0 1604 aa10.66□□□□□ -0.7
RFC1-206ENST00000503784 FAM98CQ17RN3 349 aaKnown RBP10.66□□□□□ -0.7
RFC1-206ENST00000503784 CABLES1Q8TDN4 633 aa10.66□□□□□ -0.7
RFC1-206ENST00000503784 SPATA31A3Q5VYP0 1347 aa10.65□□□□□ -0.7
RFC1-206ENST00000503784 NEXMIFQ5QGS0 1516 aa10.65□□□□□ -0.7
RFC1-206ENST00000503784 SENP3-EIF4A1A0A087X0R7 540 aa10.65□□□□□ -0.7
RFC1-206ENST00000503784 EZH2Q15910 746 aaKnown RBP10.65□□□□□ -0.7
RFC1-206ENST00000503784 PPP1R1BQ9UD71 204 aaPredicted RBP10.65□□□□□ -0.7
RFC1-206ENST00000503784 HFM1A2PYH4 1435 aa10.65□□□□□ -0.7
RFC1-206ENST00000503784 LRPPRCP42704 1394 aaKnown RBP10.65□□□□□ -0.71
RFC1-206ENST00000503784 ONECUT3O60422 494 aaPredicted RBP10.64□□□□□ -0.71
RFC1-206ENST00000503784 IFFO2Q5TF58 517 aa10.64□□□□□ -0.71
RFC1-206ENST00000503784 CDC42BPGQ6DT37 1551 aa10.64□□□□□ -0.71
RFC1-206ENST00000503784 LMOD2Q6P5Q4 547 aa10.63□□□□□ -0.71
RFC1-206ENST00000503784 NAIPQ13075 1403 aa10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 83.5 ms