RNA–Protein interactions for RNA: ENST00000503620.1

PAPD4-206, Transcript of Poly(A) RNA polymerase GLD2, humanhuman

TSL 3

Gene PAPD4, Length 582 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAPD4-206ENST00000503620 SENP3-EIF4A1A0A087X0R7 540 aa13.32□□□□□ -0.28
PAPD4-206ENST00000503620 HDGFP51858 240 aaKnown RBP13.32□□□□□ -0.28
PAPD4-206ENST00000503620 EN1Q05925 392 aaPredicted RBP13.32□□□□□ -0.28
PAPD4-206ENST00000503620 MYOM3Q5VTT5 1437 aa13.3□□□□□ -0.28
PAPD4-206ENST00000503620 BAG6P46379 1132 aa13.3□□□□□ -0.28
PAPD4-206ENST00000503620 KRT27Q7Z3Y8 459 aa13.29□□□□□ -0.28
PAPD4-206ENST00000503620 C1QTNF8P60827 252 aa13.28□□□□□ -0.28
PAPD4-206ENST00000503620 CROCC2H7BZ55 1655 aa13.28□□□□□ -0.28
PAPD4-206ENST00000503620 VPS72Q15906 364 aa13.26□□□□□ -0.29
PAPD4-206ENST00000503620 CAMKK2Q96RR4 588 aa13.26□□□□□ -0.29
PAPD4-206ENST00000503620 CAMTA1Q9Y6Y1 1673 aa13.26□□□□□ -0.29
PAPD4-206ENST00000503620 TNS1Q9HBL0 1735 aaKnown RBP13.25□□□□□ -0.29
PAPD4-206ENST00000503620 NINLQ9Y2I6 1382 aa13.24□□□□□ -0.29
PAPD4-206ENST00000503620 EZH2Q15910 746 aaKnown RBP13.24□□□□□ -0.29
PAPD4-206ENST00000503620 PTPN23Q9H3S7 1636 aa13.23□□□□□ -0.29
PAPD4-206ENST00000503620 ADGRL2O95490 1459 aa13.23□□□□□ -0.29
PAPD4-206ENST00000503620 RGPD1P0DJD0 1748 aa13.22□□□□□ -0.29
PAPD4-206ENST00000503620 DAPK1P53355 1430 aa13.22□□□□□ -0.29
PAPD4-206ENST00000503620 PRAG1Q86YV5 1406 aa13.22□□□□□ -0.29
PAPD4-206ENST00000503620 ROBO2Q9HCK4 1378 aa13.21□□□□□ -0.29
PAPD4-206ENST00000503620 USP32Q8NFA0 1604 aa13.21□□□□□ -0.29
PAPD4-206ENST00000503620 NPHP3Q7Z494 1330 aa13.19□□□□□ -0.3
PAPD4-206ENST00000503620 XPCQ01831 940 aaPredicted RBP13.19□□□□□ -0.3
PAPD4-206ENST00000503620 FAM182BQ5T319 152 aa13.19□□□□□ -0.3
PAPD4-206ENST00000503620 CHGAP10645 457 aaKnown RBP13.18□□□□□ -0.3
PAPD4-206ENST00000503620 KANK4Q5T7N3 995 aaPredicted RBP13.17□□□□□ -0.3
PAPD4-206ENST00000503620 RREB1Q92766 1687 aa13.17□□□□□ -0.3
PAPD4-206ENST00000503620 IQGAP3Q86VI3 1631 aa13.17□□□□□ -0.3
PAPD4-206ENST00000503620 NWD2Q9ULI1 1742 aa13.16□□□□□ -0.3
PAPD4-206ENST00000503620 SPATA31A3Q5VYP0 1347 aa13.16□□□□□ -0.3
PAPD4-206ENST00000503620 PLCH1Q4KWH8 1693 aa13.16□□□□□ -0.3
PAPD4-206ENST00000503620 FOXO3O43524 673 aa13.16□□□□□ -0.3
PAPD4-206ENST00000503620 E9PCH4 1651 aa13.15□□□□□ -0.3
PAPD4-206ENST00000503620 ANKRD30AQ9BXX3 1397 aa13.15□□□□□ -0.3
PAPD4-206ENST00000503620 NUP188Q5SRE5 1749 aa13.14□□□□□ -0.31
PAPD4-206ENST00000503620 PARD3Q8TEW0 1356 aa13.14□□□□□ -0.31
PAPD4-206ENST00000503620 THSD7AQ9UPZ6 1657 aa13.14□□□□□ -0.31
PAPD4-206ENST00000503620 KCNQ2O43526 872 aa13.13□□□□□ -0.31
PAPD4-206ENST00000503620 FAM98CQ17RN3 349 aaKnown RBP13.13□□□□□ -0.31
PAPD4-206ENST00000503620 SPON1Q9HCB6 807 aa13.13□□□□□ -0.31
PAPD4-206ENST00000503620 NRAPQ86VF7 1730 aa13.13□□□□□ -0.31
PAPD4-206ENST00000503620 CDC42BPGQ6DT37 1551 aa13.12□□□□□ -0.31
PAPD4-206ENST00000503620 ESCO1Q5FWF5 840 aa13.12□□□□□ -0.31
PAPD4-206ENST00000503620 CHIC2Q9UKJ5 165 aa13.12□□□□□ -0.31
PAPD4-206ENST00000503620 GOLGB1Q14789 3259 aaKnown RBP13.12□□□□□ -0.31
PAPD4-206ENST00000503620 FAM83GA6ND36 823 aa13.11□□□□□ -0.31
PAPD4-206ENST00000503620 CABLES1Q8TDN4 633 aa13.1□□□□□ -0.31
PAPD4-206ENST00000503620 ANKRD50Q9ULJ7 1429 aa13.1□□□□□ -0.31
PAPD4-206ENST00000503620 ADGRB2O60241 1585 aa13.1□□□□□ -0.31
PAPD4-206ENST00000503620 NEXMIFQ5QGS0 1516 aa13.09□□□□□ -0.31
PAPD4-206ENST00000503620 ABCA3Q99758 1704 aa13.09□□□□□ -0.31
PAPD4-206ENST00000503620 HFM1A2PYH4 1435 aa13.08□□□□□ -0.32
PAPD4-206ENST00000503620 TRIM37O94972 964 aa13.08□□□□□ -0.32
PAPD4-206ENST00000503620 PPP1R1BQ9UD71 204 aaPredicted RBP13.08□□□□□ -0.32
PAPD4-206ENST00000503620 NRKQ7Z2Y5 1582 aa13.07□□□□□ -0.32
PAPD4-206ENST00000503620 DCAF8L1A6NGE4 600 aa13.07□□□□□ -0.32
PAPD4-206ENST00000503620 PTGER2P43116 358 aa13.07□□□□□ -0.32
PAPD4-206ENST00000503620 CCDC9Q9Y3X0 531 aaKnown RBP13.07□□□□□ -0.32
PAPD4-206ENST00000503620 SPATA31A5Q5VU36 1347 aa13.07□□□□□ -0.32
PAPD4-206ENST00000503620 SPATA31A7Q8IWB4 1347 aa13.07□□□□□ -0.32
PAPD4-206ENST00000503620 CASZ1Q86V15 1759 aa13.07□□□□□ -0.32
PAPD4-206ENST00000503620 PDGFDQ9GZP0 370 aaPredicted RBP13.06□□□□□ -0.32
PAPD4-206ENST00000503620 LRPPRCP42704 1394 aaKnown RBP13.05□□□□□ -0.32
PAPD4-206ENST00000503620 TNS3Q68CZ2 1445 aa13.05□□□□□ -0.32
PAPD4-206ENST00000503620 CHD4Q14839 1912 aa13.04□□□□□ -0.32
PAPD4-206ENST00000503620 APBA3O96018 575 aa13.04□□□□□ -0.32
PAPD4-206ENST00000503620 MYOM1P52179 1685 aa13.04□□□□□ -0.32
PAPD4-206ENST00000503620 CCDC144AA2RUR9 1427 aa13.04□□□□□ -0.32
PAPD4-206ENST00000503620 NAIPQ13075 1403 aa13.03□□□□□ -0.32
PAPD4-206ENST00000503620 A0A0G2JS52 829 aa13.02□□□□□ -0.33
PAPD4-206ENST00000503620 MYT1Q01538 1121 aa13.02□□□□□ -0.33
PAPD4-206ENST00000503620 FAM196AQ6ZSG2 479 aa13.02□□□□□ -0.33
PAPD4-206ENST00000503620 ANO8Q9HCE9 1232 aaPredicted RBP13.02□□□□□ -0.33
PAPD4-206ENST00000503620 KRT28Q7Z3Y7 464 aa13.01□□□□□ -0.33
PAPD4-206ENST00000503620 SYT17Q9BSW7 474 aa13.01□□□□□ -0.33
PAPD4-206ENST00000503620 BTG4Q9NY30 223 aa13.01□□□□□ -0.33
PAPD4-206ENST00000503620 SHANK3Q9BYB0 1731 aa13□□□□□ -0.33
PAPD4-206ENST00000503620 GIGYF1O75420 1035 aaPredicted RBP13□□□□□ -0.33
PAPD4-206ENST00000503620 NBPF8Q3BBV2 869 aa13□□□□□ -0.33
PAPD4-206ENST00000503620 NBPF14Q5TI25 921 aa13□□□□□ -0.33
PAPD4-206ENST00000503620 SGIP1Q9BQI5 828 aa13□□□□□ -0.33
PAPD4-206ENST00000503620 SBNO1A3KN83 1393 aa12.99□□□□□ -0.33
PAPD4-206ENST00000503620 RRBP1Q9P2E9 1410 aaKnown RBP12.98□□□□□ -0.33
PAPD4-206ENST00000503620 NUTM2FA1L443 756 aa12.98□□□□□ -0.33
PAPD4-206ENST00000503620 FHDC1Q9C0D6 1143 aaPredicted RBP12.98□□□□□ -0.33
PAPD4-206ENST00000503620 KIF1AQ12756 1690 aa12.98□□□□□ -0.33
PAPD4-206ENST00000503620 VPS8Q8N3P4 1428 aa12.97□□□□□ -0.33
PAPD4-206ENST00000503620 TECPR2O15040 1411 aa12.96□□□□□ -0.33
PAPD4-206ENST00000503620 SPATA31A1Q5TZJ5 1347 aa12.96□□□□□ -0.33
PAPD4-206ENST00000503620 COL14A1Q05707 1796 aaKnown RBP12.96□□□□□ -0.34
PAPD4-206ENST00000503620 FMN2Q9NZ56 1722 aa12.96□□□□□ -0.34
PAPD4-206ENST00000503620 PLEKHH1Q9ULM0 1364 aa12.95□□□□□ -0.34
PAPD4-206ENST00000503620 ZNF326Q5BKZ1 582 aaKnown RBP12.95□□□□□ -0.34
PAPD4-206ENST00000503620 CLTCL1P53675 1640 aa12.95□□□□□ -0.34
PAPD4-206ENST00000503620 ARHGEF10O15013 1369 aa12.94□□□□□ -0.34
PAPD4-206ENST00000503620 ZBTB7AO95365 584 aa12.94□□□□□ -0.34
PAPD4-206ENST00000503620 MAP3K5Q99683 1374 aa12.94□□□□□ -0.34
PAPD4-206ENST00000503620 NRXN1Q9ULB1 1477 aa12.93□□□□□ -0.34
PAPD4-206ENST00000503620 WAPLQ7Z5K2 1190 aa12.93□□□□□ -0.34
PAPD4-206ENST00000503620 PROM2Q8N271 834 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms