RNA–Protein interactions for RNA: ENST00000502714.1

YIPF3-210, Transcript of Yip1 domain family member 3, humanhuman

TSL 4

Gene YIPF3, Length 795 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YIPF3-210ENST00000502714 CENPJQ9HC77 1338 aaPredicted RBP16.93■□□□□ 0.3
YIPF3-210ENST00000502714 SAFB2Q14151 953 aaKnown RBP eCLIP16.92■□□□□ 0.3
YIPF3-210ENST00000502714 CADPS2Q86UW7 1296 aa16.92■□□□□ 0.3
YIPF3-210ENST00000502714 XIRP1Q702N8 1843 aaKnown RBP16.91■□□□□ 0.3
YIPF3-210ENST00000502714 TOM1O60784 492 aa16.91■□□□□ 0.3
YIPF3-210ENST00000502714 ZEB1P37275 1124 aaPredicted RBP16.91■□□□□ 0.3
YIPF3-210ENST00000502714 NALCNQ8IZF0 1738 aa16.9■□□□□ 0.3
YIPF3-210ENST00000502714 UBAP1LF5GYI3 381 aa16.89■□□□□ 0.29
YIPF3-210ENST00000502714 CDC42BPGQ6DT37 1551 aa16.89■□□□□ 0.29
YIPF3-210ENST00000502714 USP47Q96K76 1375 aa16.89■□□□□ 0.29
YIPF3-210ENST00000502714 SIPA1L2Q9P2F8 1722 aaPredicted RBP16.88■□□□□ 0.29
YIPF3-210ENST00000502714 MINK1Q8N4C8 1332 aaPredicted RBP16.88■□□□□ 0.29
YIPF3-210ENST00000502714 ADGRB2O60241 1585 aa16.87■□□□□ 0.29
YIPF3-210ENST00000502714 SLC24A1O60721 1099 aa16.86■□□□□ 0.29
YIPF3-210ENST00000502714 HIRIP3Q9BW71 556 aaPredicted RBP16.85■□□□□ 0.29
YIPF3-210ENST00000502714 SBNO2Q9Y2G9 1366 aa16.85■□□□□ 0.29
YIPF3-210ENST00000502714 QRICH2Q9H0J4 1663 aa16.85■□□□□ 0.29
YIPF3-210ENST00000502714 SLAIN2Q9P270 581 aa16.84■□□□□ 0.29
YIPF3-210ENST00000502714 ST20-MTHFSA0A0A6YYL1 179 aa16.83■□□□□ 0.28
YIPF3-210ENST00000502714 WASLO00401 505 aaPredicted RBP16.83■□□□□ 0.28
YIPF3-210ENST00000502714 EIF4G2P78344 907 aaKnown RBP eCLIP16.83■□□□□ 0.28
YIPF3-210ENST00000502714 MST1RQ04912 1400 aa16.82■□□□□ 0.28
YIPF3-210ENST00000502714 EVC2Q86UK5 1308 aa16.82■□□□□ 0.28
YIPF3-210ENST00000502714 SCAF1Q9H7N4 1312 aaKnown RBP16.81■□□□□ 0.28
YIPF3-210ENST00000502714 ANKARQ7Z5J8 1434 aa16.8■□□□□ 0.28
YIPF3-210ENST00000502714 PIP4K2BP78356 416 aa16.8■□□□□ 0.28
YIPF3-210ENST00000502714 FBXO41Q8TF61 875 aa16.8■□□□□ 0.28
YIPF3-210ENST00000502714 C1orf167Q5SNV9 1468 aa16.8■□□□□ 0.28
YIPF3-210ENST00000502714 FMN2Q9NZ56 1722 aa16.79■□□□□ 0.28
YIPF3-210ENST00000502714 CDK19Q9BWU1 502 aa16.79■□□□□ 0.28
YIPF3-210ENST00000502714 TULP4Q9NRJ4 1543 aa16.79■□□□□ 0.28
YIPF3-210ENST00000502714 SRPK2P78362 688 aaKnown RBP16.78■□□□□ 0.28
YIPF3-210ENST00000502714 NUTM2FA1L443 756 aa16.77■□□□□ 0.28
YIPF3-210ENST00000502714 TESK2Q96S53 571 aa16.77■□□□□ 0.28
YIPF3-210ENST00000502714 HSPA5P11021 654 aaKnown RBP16.76■□□□□ 0.27
YIPF3-210ENST00000502714 TMF1P82094 1093 aa16.76■□□□□ 0.27
YIPF3-210ENST00000502714 CDCA8Q53HL2 280 aa16.75■□□□□ 0.27
YIPF3-210ENST00000502714 ESCO1Q5FWF5 840 aa16.75■□□□□ 0.27
YIPF3-210ENST00000502714 BRINP3Q76B58 766 aa16.75■□□□□ 0.27
YIPF3-210ENST00000502714 NUDT16Q96DE0 195 aaKnown RBP16.74■□□□□ 0.27
YIPF3-210ENST00000502714 CABP2Q9NPB3 220 aa16.74■□□□□ 0.27
YIPF3-210ENST00000502714 ROBO1Q9Y6N7 1651 aa16.74■□□□□ 0.27
YIPF3-210ENST00000502714 ATAD2Q6PL18 1390 aa16.74■□□□□ 0.27
YIPF3-210ENST00000502714 ATP7BP35670 1465 aa16.73■□□□□ 0.27
YIPF3-210ENST00000502714 PUS7Q96PZ0 661 aaKnown RBP16.73■□□□□ 0.27
YIPF3-210ENST00000502714 CCDC61Q9Y6R9 512 aa16.73■□□□□ 0.27
YIPF3-210ENST00000502714 ORAI2Q96SN7 254 aa16.72■□□□□ 0.27
YIPF3-210ENST00000502714 PHF8Q9UPP1 1060 aa16.72■□□□□ 0.27
YIPF3-210ENST00000502714 PRR36Q9H6K5 1346 aa16.71■□□□□ 0.27
YIPF3-210ENST00000502714 USP32Q8NFA0 1604 aa16.71■□□□□ 0.27
YIPF3-210ENST00000502714 KIF1AQ12756 1690 aa16.71■□□□□ 0.27
YIPF3-210ENST00000502714 ITSN1Q15811 1721 aa16.7■□□□□ 0.26
YIPF3-210ENST00000502714 NPHP3Q7Z494 1330 aa16.7■□□□□ 0.26
YIPF3-210ENST00000502714 DISP3Q9P2K9 1392 aa16.69■□□□□ 0.26
YIPF3-210ENST00000502714 PPIP5K1Q6PFW1 1433 aa16.69■□□□□ 0.26
YIPF3-210ENST00000502714 AHDC1Q5TGY3 1603 aaPredicted RBP16.67■□□□□ 0.26
YIPF3-210ENST00000502714 NINLQ9Y2I6 1382 aa16.67■□□□□ 0.26
YIPF3-210ENST00000502714 TOPAZ1Q8N9V7 1692 aa16.67■□□□□ 0.26
YIPF3-210ENST00000502714 FOXO3O43524 673 aa16.67■□□□□ 0.26
YIPF3-210ENST00000502714 NGDNQ8NEJ9 315 aaKnown RBP16.67■□□□□ 0.26
YIPF3-210ENST00000502714 PLEKHG3A1L390 1219 aa16.66■□□□□ 0.26
YIPF3-210ENST00000502714 PMFBP1Q8TBY8 1022 aa16.66■□□□□ 0.26
YIPF3-210ENST00000502714 CABP1Q9NZU7 370 aa16.65■□□□□ 0.26
YIPF3-210ENST00000502714 POLR3AO14802 1390 aaPredicted RBP16.64■□□□□ 0.26
YIPF3-210ENST00000502714 RGPD8O14715 1765 aaPredicted RBP16.64■□□□□ 0.25
YIPF3-210ENST00000502714 NHSL1Q5SYE7 1610 aa16.64■□□□□ 0.25
YIPF3-210ENST00000502714 PSME1Q06323 249 aa16.64■□□□□ 0.25
YIPF3-210ENST00000502714 TMC1Q8TDI8 760 aa16.64■□□□□ 0.25
YIPF3-210ENST00000502714 HSPA1LP34931 641 aa16.63■□□□□ 0.25
YIPF3-210ENST00000502714 ACEP12821 1306 aa16.63■□□□□ 0.25
YIPF3-210ENST00000502714 SOS2Q07890 1332 aaPredicted RBP16.63■□□□□ 0.25
YIPF3-210ENST00000502714 PHLPP1O60346 1717 aa16.62■□□□□ 0.25
YIPF3-210ENST00000502714 DDX17Q92841 729 aaKnown RBP16.62■□□□□ 0.25
YIPF3-210ENST00000502714 TERF2IPQ9NYB0 399 aa16.62■□□□□ 0.25
YIPF3-210ENST00000502714 KRT28Q7Z3Y7 464 aa16.61■□□□□ 0.25
YIPF3-210ENST00000502714 HDGFL2Q7Z4V5 671 aaPredicted RBP16.61■□□□□ 0.25
YIPF3-210ENST00000502714 LRRC59Q96AG4 307 aaKnown RBP16.61■□□□□ 0.25
YIPF3-210ENST00000502714 POLR3GLQ9BT43 218 aa16.61■□□□□ 0.25
YIPF3-210ENST00000502714 ZNF692Q9BU19 519 aaPredicted RBP16.61■□□□□ 0.25
YIPF3-210ENST00000502714 PXDNQ92626 1479 aa16.61■□□□□ 0.25
YIPF3-210ENST00000502714 XPCQ01831 940 aaPredicted RBP16.6■□□□□ 0.25
YIPF3-210ENST00000502714 ILDR1Q86SU0 546 aaPredicted RBP16.6■□□□□ 0.25
YIPF3-210ENST00000502714 BRD4O60885 1362 aaPredicted RBP16.6■□□□□ 0.25
YIPF3-210ENST00000502714 COL16A1Q07092 1604 aaPredicted RBP16.59■□□□□ 0.25
YIPF3-210ENST00000502714 SLC12A5Q9H2X9 1139 aa16.59■□□□□ 0.25
YIPF3-210ENST00000502714 SBNO1A3KN83 1393 aa16.59■□□□□ 0.25
YIPF3-210ENST00000502714 CPSF1Q10570 1443 aaKnown RBP16.58■□□□□ 0.24
YIPF3-210ENST00000502714 USP6P35125 1406 aa16.57■□□□□ 0.24
YIPF3-210ENST00000502714 KTN1Q86UP2 1357 aaKnown RBP16.57■□□□□ 0.24
YIPF3-210ENST00000502714 JCADQ9P266 1359 aa16.57■□□□□ 0.24
YIPF3-210ENST00000502714 KIF7Q2M1P5 1343 aa16.57■□□□□ 0.24
YIPF3-210ENST00000502714 TNS3Q68CZ2 1445 aa16.56■□□□□ 0.24
YIPF3-210ENST00000502714 ANKRD36BQ8N2N9 1353 aa16.56■□□□□ 0.24
YIPF3-210ENST00000502714 C11orf95C9JLR9 678 aaPredicted RBP16.56■□□□□ 0.24
YIPF3-210ENST00000502714 PAK3O75914 559 aaPredicted RBP16.56■□□□□ 0.24
YIPF3-210ENST00000502714 A0A1W2PP64 1363 aa16.55■□□□□ 0.24
YIPF3-210ENST00000502714 ARHGEF10O15013 1369 aa16.55■□□□□ 0.24
YIPF3-210ENST00000502714 SPATA31A3Q5VYP0 1347 aa16.55■□□□□ 0.24
YIPF3-210ENST00000502714 CD163L1Q9NR16 1453 aa16.54■□□□□ 0.24
YIPF3-210ENST00000502714 CCDC7Q96M83 1385 aa16.54■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms