RNA–Protein interactions for RNA: ENST00000502316.5

RNF4-202, Transcript of ring finger protein 4, humanhuman

TSL 2

Gene RNF4, Length 855 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-202ENST00000502316 TOM1O60784 492 aa20.19■□□□□ 0.82
RNF4-202ENST00000502316 ADGRB2O60241 1585 aa20.19■□□□□ 0.82
RNF4-202ENST00000502316 UBAP1LF5GYI3 381 aa20.18■□□□□ 0.82
RNF4-202ENST00000502316 CADPS2Q86UW7 1296 aa20.18■□□□□ 0.82
RNF4-202ENST00000502316 CARD11Q9BXL7 1154 aa20.18■□□□□ 0.82
RNF4-202ENST00000502316 POGKQ9P215 609 aa20.18■□□□□ 0.82
RNF4-202ENST00000502316 FBXO41Q8TF61 875 aa20.17■□□□□ 0.82
RNF4-202ENST00000502316 ATF3P18847 181 aa20.16■□□□□ 0.82
RNF4-202ENST00000502316 EIF3AQ14152 1382 aaKnown RBP20.15■□□□□ 0.82
RNF4-202ENST00000502316 MST1RQ04912 1400 aa20.14■□□□□ 0.81
RNF4-202ENST00000502316 CENPJQ9HC77 1338 aaPredicted RBP20.14■□□□□ 0.81
RNF4-202ENST00000502316 SAFB2Q14151 953 aaKnown RBP eCLIP20.14■□□□□ 0.81
RNF4-202ENST00000502316 QRICH2Q9H0J4 1663 aa20.13■□□□□ 0.81
RNF4-202ENST00000502316 SLAIN2Q9P270 581 aa20.12■□□□□ 0.81
RNF4-202ENST00000502316 FMN2Q9NZ56 1722 aa20.12■□□□□ 0.81
RNF4-202ENST00000502316 SBNO2Q9Y2G9 1366 aa20.09■□□□□ 0.81
RNF4-202ENST00000502316 MINK1Q8N4C8 1332 aaPredicted RBP20.09■□□□□ 0.81
RNF4-202ENST00000502316 C1orf167Q5SNV9 1468 aa20.09■□□□□ 0.81
RNF4-202ENST00000502316 ROBO1Q9Y6N7 1651 aa20.07■□□□□ 0.8
RNF4-202ENST00000502316 HIRIP3Q9BW71 556 aaPredicted RBP20.07■□□□□ 0.8
RNF4-202ENST00000502316 USP47Q96K76 1375 aa20.07■□□□□ 0.8
RNF4-202ENST00000502316 WASLO00401 505 aaPredicted RBP20.06■□□□□ 0.8
RNF4-202ENST00000502316 PIP4K2BP78356 416 aa20.06■□□□□ 0.8
RNF4-202ENST00000502316 ANKARQ7Z5J8 1434 aa20.06■□□□□ 0.8
RNF4-202ENST00000502316 TULP4Q9NRJ4 1543 aa20.06■□□□□ 0.8
RNF4-202ENST00000502316 USP32Q8NFA0 1604 aa20.05■□□□□ 0.8
RNF4-202ENST00000502316 BRINP3Q76B58 766 aa20.03■□□□□ 0.8
RNF4-202ENST00000502316 SCAF1Q9H7N4 1312 aaKnown RBP20.02■□□□□ 0.8
RNF4-202ENST00000502316 ATP7BP35670 1465 aa20.01■□□□□ 0.79
RNF4-202ENST00000502316 ST20-MTHFSA0A0A6YYL1 179 aa20.01■□□□□ 0.79
RNF4-202ENST00000502316 TESK2Q96S53 571 aa20.01■□□□□ 0.79
RNF4-202ENST00000502316 CDK19Q9BWU1 502 aa20■□□□□ 0.79
RNF4-202ENST00000502316 AHDC1Q5TGY3 1603 aaPredicted RBP20■□□□□ 0.79
RNF4-202ENST00000502316 PRR36Q9H6K5 1346 aa20■□□□□ 0.79
RNF4-202ENST00000502316 NUTM2FA1L443 756 aa19.99■□□□□ 0.79
RNF4-202ENST00000502316 ILDR1Q86SU0 546 aaPredicted RBP19.99■□□□□ 0.79
RNF4-202ENST00000502316 ORAI2Q96SN7 254 aa19.99■□□□□ 0.79
RNF4-202ENST00000502316 EVC2Q86UK5 1308 aa19.99■□□□□ 0.79
RNF4-202ENST00000502316 NHSL1Q5SYE7 1610 aa19.98■□□□□ 0.79
RNF4-202ENST00000502316 RGPD8O14715 1765 aaPredicted RBP19.98■□□□□ 0.79
RNF4-202ENST00000502316 KIF1AQ12756 1690 aa19.98■□□□□ 0.79
RNF4-202ENST00000502316 TOPAZ1Q8N9V7 1692 aa19.97■□□□□ 0.79
RNF4-202ENST00000502316 SLC24A1O60721 1099 aa19.97■□□□□ 0.79
RNF4-202ENST00000502316 ESCO1Q5FWF5 840 aa19.97■□□□□ 0.79
RNF4-202ENST00000502316 ITSN1Q15811 1721 aa19.96■□□□□ 0.79
RNF4-202ENST00000502316 EIF4G2P78344 907 aaKnown RBP eCLIP19.95■□□□□ 0.78
RNF4-202ENST00000502316 NUDT16Q96DE0 195 aaKnown RBP19.95■□□□□ 0.78
RNF4-202ENST00000502316 HSPA1LP34931 641 aa19.94■□□□□ 0.78
RNF4-202ENST00000502316 SRPK2P78362 688 aaKnown RBP19.94■□□□□ 0.78
RNF4-202ENST00000502316 CABP2Q9NPB3 220 aa19.93■□□□□ 0.78
RNF4-202ENST00000502316 PHF8Q9UPP1 1060 aa19.93■□□□□ 0.78
RNF4-202ENST00000502316 COL16A1Q07092 1604 aaPredicted RBP19.93■□□□□ 0.78
RNF4-202ENST00000502316 PHLPP1O60346 1717 aa19.93■□□□□ 0.78
RNF4-202ENST00000502316 HSPA5P11021 654 aaKnown RBP19.92■□□□□ 0.78
RNF4-202ENST00000502316 PUS7Q96PZ0 661 aaKnown RBP19.92■□□□□ 0.78
RNF4-202ENST00000502316 CCDC61Q9Y6R9 512 aa19.92■□□□□ 0.78
RNF4-202ENST00000502316 NPHP3Q7Z494 1330 aa19.91■□□□□ 0.78
RNF4-202ENST00000502316 ATAD2Q6PL18 1390 aa19.91■□□□□ 0.78
RNF4-202ENST00000502316 DISP3Q9P2K9 1392 aa19.9■□□□□ 0.78
RNF4-202ENST00000502316 PXDNQ92626 1479 aa19.9■□□□□ 0.78
RNF4-202ENST00000502316 PLEKHG3A1L390 1219 aa19.89■□□□□ 0.77
RNF4-202ENST00000502316 ZEB1P37275 1124 aaPredicted RBP19.89■□□□□ 0.77
RNF4-202ENST00000502316 TMF1P82094 1093 aa19.89■□□□□ 0.77
RNF4-202ENST00000502316 SOS2Q07890 1332 aaPredicted RBP19.89■□□□□ 0.77
RNF4-202ENST00000502316 PPIP5K1Q6PFW1 1433 aa19.89■□□□□ 0.77
RNF4-202ENST00000502316 POLR3AO14802 1390 aaPredicted RBP19.88■□□□□ 0.77
RNF4-202ENST00000502316 FOXO3O43524 673 aa19.88■□□□□ 0.77
RNF4-202ENST00000502316 DDX17Q92841 729 aaKnown RBP19.88■□□□□ 0.77
RNF4-202ENST00000502316 PMFBP1Q8TBY8 1022 aa19.87■□□□□ 0.77
RNF4-202ENST00000502316 CDCA8Q53HL2 280 aa19.84■□□□□ 0.77
RNF4-202ENST00000502316 CABP1Q9NZU7 370 aa19.84■□□□□ 0.77
RNF4-202ENST00000502316 ACEP12821 1306 aa19.83■□□□□ 0.77
RNF4-202ENST00000502316 NINLQ9Y2I6 1382 aa19.83■□□□□ 0.76
RNF4-202ENST00000502316 TRPM3Q9HCF6 1732 aaPredicted RBP19.82■□□□□ 0.76
RNF4-202ENST00000502316 NGDNQ8NEJ9 315 aaKnown RBP19.82■□□□□ 0.76
RNF4-202ENST00000502316 LRRC59Q96AG4 307 aaKnown RBP19.82■□□□□ 0.76
RNF4-202ENST00000502316 SHPRHQ149N8 1683 aa19.81■□□□□ 0.76
RNF4-202ENST00000502316 KRT28Q7Z3Y7 464 aa19.81■□□□□ 0.76
RNF4-202ENST00000502316 SBNO1A3KN83 1393 aa19.81■□□□□ 0.76
RNF4-202ENST00000502316 JCADQ9P266 1359 aa19.81■□□□□ 0.76
RNF4-202ENST00000502316 CPSF1Q10570 1443 aaKnown RBP19.8■□□□□ 0.76
RNF4-202ENST00000502316 XPCQ01831 940 aaPredicted RBP19.8■□□□□ 0.76
RNF4-202ENST00000502316 PSME1Q06323 249 aa19.8■□□□□ 0.76
RNF4-202ENST00000502316 CD163L1Q9NR16 1453 aa19.79■□□□□ 0.76
RNF4-202ENST00000502316 AKAP12Q02952 1782 aa19.79■□□□□ 0.76
RNF4-202ENST00000502316 SPATA31A3Q5VYP0 1347 aa19.78■□□□□ 0.76
RNF4-202ENST00000502316 TNS3Q68CZ2 1445 aa19.78■□□□□ 0.76
RNF4-202ENST00000502316 BRD4O60885 1362 aaPredicted RBP19.78■□□□□ 0.76
RNF4-202ENST00000502316 PNPLA6Q8IY17 1366 aa19.78■□□□□ 0.76
RNF4-202ENST00000502316 MYOM1P52179 1685 aa19.78■□□□□ 0.76
RNF4-202ENST00000502316 USP6P35125 1406 aa19.77■□□□□ 0.76
RNF4-202ENST00000502316 COL22A1Q8NFW1 1626 aaPredicted RBP19.77■□□□□ 0.76
RNF4-202ENST00000502316 ALS2Q96Q42 1657 aa19.77■□□□□ 0.76
RNF4-202ENST00000502316 SSH2Q76I76 1423 aa19.76■□□□□ 0.75
RNF4-202ENST00000502316 ZNF692Q9BU19 519 aaPredicted RBP19.76■□□□□ 0.75
RNF4-202ENST00000502316 SLC12A5Q9H2X9 1139 aa19.76■□□□□ 0.75
RNF4-202ENST00000502316 MON2Q7Z3U7 1717 aa19.76■□□□□ 0.75
RNF4-202ENST00000502316 NRKQ7Z2Y5 1582 aa19.75■□□□□ 0.75
RNF4-202ENST00000502316 C11orf95C9JLR9 678 aaPredicted RBP19.75■□□□□ 0.75
RNF4-202ENST00000502316 TMC1Q8TDI8 760 aa19.75■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 90.8 ms