RNA–Protein interactions for RNA: ENST00000500090.2

YIPF3-209, Transcript of Yip1 domain family member 3, humanhuman

TSL 3

Gene YIPF3, Length 406 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YIPF3-209ENST00000500090 NBPF1Q3BBV0 1214 aa17.53■□□□□ 0.4
YIPF3-209ENST00000500090 PLEKHH1Q9ULM0 1364 aa17.53■□□□□ 0.4
YIPF3-209ENST00000500090 NALCNQ8IZF0 1738 aa17.52■□□□□ 0.4
YIPF3-209ENST00000500090 HSPA1LP34931 641 aa17.51■□□□□ 0.39
YIPF3-209ENST00000500090 MST1RQ04912 1400 aa17.5■□□□□ 0.39
YIPF3-209ENST00000500090 NBPF8Q3BBV2 869 aa17.49■□□□□ 0.39
YIPF3-209ENST00000500090 ROCK2O75116 1388 aaKnown RBP17.49■□□□□ 0.39
YIPF3-209ENST00000500090 SAFB2Q14151 953 aaKnown RBP eCLIP17.48■□□□□ 0.39
YIPF3-209ENST00000500090 CDC42BPGQ6DT37 1551 aa17.48■□□□□ 0.39
YIPF3-209ENST00000500090 ROBO1Q9Y6N7 1651 aa17.48■□□□□ 0.39
YIPF3-209ENST00000500090 TRPM1Q7Z4N2 1603 aa17.47■□□□□ 0.39
YIPF3-209ENST00000500090 BRINP3Q76B58 766 aa17.47■□□□□ 0.39
YIPF3-209ENST00000500090 C1orf167Q5SNV9 1468 aa17.46■□□□□ 0.39
YIPF3-209ENST00000500090 GPRASP1Q5JY77 1395 aa17.45■□□□□ 0.38
YIPF3-209ENST00000500090 MINK1Q8N4C8 1332 aaPredicted RBP17.44■□□□□ 0.38
YIPF3-209ENST00000500090 ARHGEF28Q8N1W1 1705 aaKnown RBP17.44■□□□□ 0.38
YIPF3-209ENST00000500090 CENPJQ9HC77 1338 aaPredicted RBP17.43■□□□□ 0.38
YIPF3-209ENST00000500090 EIF3AQ14152 1382 aaKnown RBP17.42■□□□□ 0.38
YIPF3-209ENST00000500090 WASLO00401 505 aaPredicted RBP17.42■□□□□ 0.38
YIPF3-209ENST00000500090 ESCO1Q5FWF5 840 aa17.42■□□□□ 0.38
YIPF3-209ENST00000500090 CARD11Q9BXL7 1154 aa17.42■□□□□ 0.38
YIPF3-209ENST00000500090 RALGAPBQ86X10 1494 aa17.42■□□□□ 0.38
YIPF3-209ENST00000500090 ADGRB2O60241 1585 aa17.41■□□□□ 0.38
YIPF3-209ENST00000500090 ORAI2Q96SN7 254 aa17.41■□□□□ 0.38
YIPF3-209ENST00000500090 HIRIP3Q9BW71 556 aaPredicted RBP17.41■□□□□ 0.38
YIPF3-209ENST00000500090 AHDC1Q5TGY3 1603 aaPredicted RBP17.39■□□□□ 0.38
YIPF3-209ENST00000500090 FMN2Q9NZ56 1722 aa17.39■□□□□ 0.37
YIPF3-209ENST00000500090 NUTM2FA1L443 756 aa17.39■□□□□ 0.37
YIPF3-209ENST00000500090 ANKARQ7Z5J8 1434 aa17.38■□□□□ 0.37
YIPF3-209ENST00000500090 PHLPP1O60346 1717 aa17.37■□□□□ 0.37
YIPF3-209ENST00000500090 CDK19Q9BWU1 502 aa17.36■□□□□ 0.37
YIPF3-209ENST00000500090 NPHP3Q7Z494 1330 aa17.36■□□□□ 0.37
YIPF3-209ENST00000500090 LRRC59Q96AG4 307 aaKnown RBP17.35■□□□□ 0.37
YIPF3-209ENST00000500090 PHF8Q9UPP1 1060 aa17.35■□□□□ 0.37
YIPF3-209ENST00000500090 FOXO3O43524 673 aa17.34■□□□□ 0.37
YIPF3-209ENST00000500090 SOS2Q07890 1332 aaPredicted RBP17.34■□□□□ 0.37
YIPF3-209ENST00000500090 NHSL1Q5SYE7 1610 aa17.34■□□□□ 0.37
YIPF3-209ENST00000500090 JCADQ9P266 1359 aa17.34■□□□□ 0.37
YIPF3-209ENST00000500090 COL16A1Q07092 1604 aaPredicted RBP17.33■□□□□ 0.37
YIPF3-209ENST00000500090 TULP4Q9NRJ4 1543 aa17.33■□□□□ 0.37
YIPF3-209ENST00000500090 DDX17Q92841 729 aaKnown RBP17.33■□□□□ 0.36
YIPF3-209ENST00000500090 EVC2Q86UK5 1308 aa17.32■□□□□ 0.36
YIPF3-209ENST00000500090 SLC24A1O60721 1099 aa17.32■□□□□ 0.36
YIPF3-209ENST00000500090 NUDT16Q96DE0 195 aaKnown RBP17.32■□□□□ 0.36
YIPF3-209ENST00000500090 SBNO2Q9Y2G9 1366 aa17.31■□□□□ 0.36
YIPF3-209ENST00000500090 PRR36Q9H6K5 1346 aa17.31■□□□□ 0.36
YIPF3-209ENST00000500090 CCDC61Q9Y6R9 512 aa17.31■□□□□ 0.36
YIPF3-209ENST00000500090 KIF1AQ12756 1690 aa17.31■□□□□ 0.36
YIPF3-209ENST00000500090 QRICH2Q9H0J4 1663 aa17.31■□□□□ 0.36
YIPF3-209ENST00000500090 SRPK2P78362 688 aaKnown RBP17.3■□□□□ 0.36
YIPF3-209ENST00000500090 RGPD8O14715 1765 aaPredicted RBP17.3■□□□□ 0.36
YIPF3-209ENST00000500090 USP32Q8NFA0 1604 aa17.29■□□□□ 0.36
YIPF3-209ENST00000500090 PSME1Q06323 249 aa17.29■□□□□ 0.36
YIPF3-209ENST00000500090 SPATA31A6Q5VVP1 1343 aa17.28■□□□□ 0.36
YIPF3-209ENST00000500090 KRT28Q7Z3Y7 464 aa17.28■□□□□ 0.36
YIPF3-209ENST00000500090 PMFBP1Q8TBY8 1022 aa17.28■□□□□ 0.36
YIPF3-209ENST00000500090 ATP7BP35670 1465 aa17.28■□□□□ 0.36
YIPF3-209ENST00000500090 NGDNQ8NEJ9 315 aaKnown RBP17.27■□□□□ 0.36
YIPF3-209ENST00000500090 CABP2Q9NPB3 220 aa17.27■□□□□ 0.36
YIPF3-209ENST00000500090 PXDNQ92626 1479 aa17.26■□□□□ 0.35
YIPF3-209ENST00000500090 ST20-MTHFSA0A0A6YYL1 179 aa17.26■□□□□ 0.35
YIPF3-209ENST00000500090 PLEKHG3A1L390 1219 aa17.26■□□□□ 0.35
YIPF3-209ENST00000500090 ITSN1Q15811 1721 aa17.25■□□□□ 0.35
YIPF3-209ENST00000500090 XPCQ01831 940 aaPredicted RBP17.25■□□□□ 0.35
YIPF3-209ENST00000500090 USP47Q96K76 1375 aa17.25■□□□□ 0.35
YIPF3-209ENST00000500090 SHPRHQ149N8 1683 aa17.24■□□□□ 0.35
YIPF3-209ENST00000500090 PUS7Q96PZ0 661 aaKnown RBP17.24■□□□□ 0.35
YIPF3-209ENST00000500090 PNPLA6Q8IY17 1366 aa17.24■□□□□ 0.35
YIPF3-209ENST00000500090 TESK2Q96S53 571 aa17.23■□□□□ 0.35
YIPF3-209ENST00000500090 SBNO1A3KN83 1393 aa17.23■□□□□ 0.35
YIPF3-209ENST00000500090 ATAD2Q6PL18 1390 aa17.23■□□□□ 0.35
YIPF3-209ENST00000500090 SPATA31A3Q5VYP0 1347 aa17.22■□□□□ 0.35
YIPF3-209ENST00000500090 POLR3AO14802 1390 aaPredicted RBP17.22■□□□□ 0.35
YIPF3-209ENST00000500090 MED1Q15648 1581 aaPredicted RBP17.21■□□□□ 0.35
YIPF3-209ENST00000500090 CABP1Q9NZU7 370 aa17.21■□□□□ 0.35
YIPF3-209ENST00000500090 PPIP5K1Q6PFW1 1433 aa17.21■□□□□ 0.34
YIPF3-209ENST00000500090 ACEP12821 1306 aa17.21■□□□□ 0.34
YIPF3-209ENST00000500090 TOPAZ1Q8N9V7 1692 aa17.2■□□□□ 0.34
YIPF3-209ENST00000500090 DISP3Q9P2K9 1392 aa17.19■□□□□ 0.34
YIPF3-209ENST00000500090 TMF1P82094 1093 aa17.19■□□□□ 0.34
YIPF3-209ENST00000500090 TNS3Q68CZ2 1445 aa17.19■□□□□ 0.34
YIPF3-209ENST00000500090 ARHGEF10O15013 1369 aa17.18■□□□□ 0.34
YIPF3-209ENST00000500090 EIF4G2P78344 907 aaKnown RBP eCLIP17.18■□□□□ 0.34
YIPF3-209ENST00000500090 BRD4O60885 1362 aaPredicted RBP17.17■□□□□ 0.34
YIPF3-209ENST00000500090 NUTM2BA6NNL0 878 aaPredicted RBP17.17■□□□□ 0.34
YIPF3-209ENST00000500090 NUTM2EB1AL46 878 aaPredicted RBP17.17■□□□□ 0.34
YIPF3-209ENST00000500090 CDCA8Q53HL2 280 aa17.17■□□□□ 0.34
YIPF3-209ENST00000500090 MEX3CQ5U5Q3 659 aaKnown RBP17.17■□□□□ 0.34
YIPF3-209ENST00000500090 NUTM2AQ8IVF1 878 aaPredicted RBP17.17■□□□□ 0.34
YIPF3-209ENST00000500090 ZNF692Q9BU19 519 aaPredicted RBP17.17■□□□□ 0.34
YIPF3-209ENST00000500090 PHF23Q9BUL5 403 aaPredicted RBP17.17■□□□□ 0.34
YIPF3-209ENST00000500090 LMOD2Q6P5Q4 547 aa17.16■□□□□ 0.34
YIPF3-209ENST00000500090 COL22A1Q8NFW1 1626 aaPredicted RBP17.15■□□□□ 0.34
YIPF3-209ENST00000500090 PAK3O75914 559 aaPredicted RBP17.15■□□□□ 0.34
YIPF3-209ENST00000500090 LRP6O75581 1613 aa17.14■□□□□ 0.33
YIPF3-209ENST00000500090 TRPM3Q9HCF6 1732 aaPredicted RBP17.13■□□□□ 0.33
YIPF3-209ENST00000500090 NINLQ9Y2I6 1382 aa17.13■□□□□ 0.33
YIPF3-209ENST00000500090 TMC1Q8TDI8 760 aa17.12■□□□□ 0.33
YIPF3-209ENST00000500090 ADAMTS2O95450 1211 aa17.11■□□□□ 0.33
YIPF3-209ENST00000500090 HSPA5P11021 654 aaKnown RBP17.11■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms