RNA–Protein interactions for RNA: ENST00000499732.2

NEAT1-201, nuclear paraspeckle assembly transcript 1, humanhuman

TSL 2 BASIC

Gene NEAT1, Length 1,811 nt, Biotype lincRNA, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEAT1-201ENST00000499732 SLIT1O75093 1534 aa19.46■□□□□ 0.71
NEAT1-201ENST00000499732 ARHGAP23Q9P227 1491 aa19.45■□□□□ 0.7
NEAT1-201ENST00000499732 SENP3Q9H4L4 574 aaPredicted RBP19.43■□□□□ 0.7
NEAT1-201ENST00000499732 LRPPRCP42704 1394 aaKnown RBP19.42■□□□□ 0.7
NEAT1-201ENST00000499732 ALKQ9UM73 1620 aa19.42■□□□□ 0.7
NEAT1-201ENST00000499732 MYOM1P52179 1685 aa19.42■□□□□ 0.7
NEAT1-201ENST00000499732 NRXN3Q9Y4C0 1643 aa19.42■□□□□ 0.7
NEAT1-201ENST00000499732 BRD4O60885 1362 aaPredicted RBP19.41■□□□□ 0.7
NEAT1-201ENST00000499732 SBNO2Q9Y2G9 1366 aa19.41■□□□□ 0.7
NEAT1-201ENST00000499732 SLC24A1O60721 1099 aa19.41■□□□□ 0.7
NEAT1-201ENST00000499732 PNISRQ8TF01 805 aaKnown RBP19.41■□□□□ 0.7
NEAT1-201ENST00000499732 QRICH2Q9H0J4 1663 aa19.41■□□□□ 0.7
NEAT1-201ENST00000499732 ASXL1Q8IXJ9 1541 aa19.4■□□□□ 0.7
NEAT1-201ENST00000499732 TMEM132EQ6IEE7 984 aa19.4■□□□□ 0.7
NEAT1-201ENST00000499732 EID1Q9Y6B2 187 aa19.4■□□□□ 0.7
NEAT1-201ENST00000499732 ARHGEF28Q8N1W1 1705 aaKnown RBP19.4■□□□□ 0.7
NEAT1-201ENST00000499732 SETD1AO15047 1707 aaKnown RBP19.39■□□□□ 0.69
NEAT1-201ENST00000499732 PER1O15534 1290 aaPredicted RBP19.39■□□□□ 0.69
NEAT1-201ENST00000499732 CDCA8Q53HL2 280 aa19.38■□□□□ 0.69
NEAT1-201ENST00000499732 TXNDC2Q86VQ3 553 aa19.37■□□□□ 0.69
NEAT1-201ENST00000499732 PLEKHG1Q9ULL1 1385 aa19.37■□□□□ 0.69
NEAT1-201ENST00000499732 LTKP29376 864 aa19.37■□□□□ 0.69
NEAT1-201ENST00000499732 MYBBP1AQ9BQG0 1328 aaKnown RBP19.36■□□□□ 0.69
NEAT1-201ENST00000499732 CENPJQ9HC77 1338 aaPredicted RBP19.36■□□□□ 0.69
NEAT1-201ENST00000499732 PIP4K2BP78356 416 aa19.36■□□□□ 0.69
NEAT1-201ENST00000499732 RALBP1Q15311 655 aa19.36■□□□□ 0.69
NEAT1-201ENST00000499732 TMC1Q8TDI8 760 aa19.36■□□□□ 0.69
NEAT1-201ENST00000499732 TRAK1Q9UPV9 953 aa19.36■□□□□ 0.69
NEAT1-201ENST00000499732 CCDC136Q96JN2 1154 aa19.35■□□□□ 0.69
NEAT1-201ENST00000499732 PANK3Q9H999 370 aa19.35■□□□□ 0.69
NEAT1-201ENST00000499732 CNGB1Q14028 1251 aaPredicted RBP19.35■□□□□ 0.69
NEAT1-201ENST00000499732 YTHDC2Q9H6S0 1430 aaKnown RBP19.33■□□□□ 0.69
NEAT1-201ENST00000499732 NOP58Q9Y2X3 529 aaKnown RBP19.33■□□□□ 0.69
NEAT1-201ENST00000499732 PARD3Q8TEW0 1356 aa19.33■□□□□ 0.69
NEAT1-201ENST00000499732 ADAMTS13Q76LX8 1427 aa19.32■□□□□ 0.68
NEAT1-201ENST00000499732 ILDR2Q71H61 639 aa19.31■□□□□ 0.68
NEAT1-201ENST00000499732 SOCS7O14512 581 aa19.3■□□□□ 0.68
NEAT1-201ENST00000499732 HSPA1LP34931 641 aa19.3■□□□□ 0.68
NEAT1-201ENST00000499732 DIP2AQ14689 1571 aa19.29■□□□□ 0.68
NEAT1-201ENST00000499732 DLC1Q96QB1 1528 aa19.29■□□□□ 0.68
NEAT1-201ENST00000499732 ABCC11Q96J66 1382 aa19.29■□□□□ 0.68
NEAT1-201ENST00000499732 STK26Q9P289 416 aa19.28■□□□□ 0.68
NEAT1-201ENST00000499732 INSRP06213 1382 aa19.28■□□□□ 0.68
NEAT1-201ENST00000499732 METP08581 1390 aa19.28■□□□□ 0.68
NEAT1-201ENST00000499732 LRRC7Q96NW7 1537 aa19.28■□□□□ 0.68
NEAT1-201ENST00000499732 TULP4Q9NRJ4 1543 aa19.26■□□□□ 0.67
NEAT1-201ENST00000499732 ANP32AP39687 249 aaKnown RBP19.26■□□□□ 0.67
NEAT1-201ENST00000499732 TBX22Q9Y458 520 aa19.26■□□□□ 0.67
NEAT1-201ENST00000499732 KNDC1Q76NI1 1749 aa19.25■□□□□ 0.67
NEAT1-201ENST00000499732 PDE3BQ13370 1112 aa19.24■□□□□ 0.67
NEAT1-201ENST00000499732 SIRT1Q96EB6 747 aa19.24■□□□□ 0.67
NEAT1-201ENST00000499732 SLC26A8Q96RN1 970 aa19.24■□□□□ 0.67
NEAT1-201ENST00000499732 TECPR2O15040 1411 aa19.23■□□□□ 0.67
NEAT1-201ENST00000499732 RRP1P56182 461 aaKnown RBP19.23■□□□□ 0.67
NEAT1-201ENST00000499732 CC2D1BQ5T0F9 858 aaKnown RBP19.23■□□□□ 0.67
NEAT1-201ENST00000499732 NLRP13Q86W25 1043 aa19.23■□□□□ 0.67
NEAT1-201ENST00000499732 POGKQ9P215 609 aa19.23■□□□□ 0.67
NEAT1-201ENST00000499732 AMER1Q5JTC6 1135 aaPredicted RBP19.22■□□□□ 0.67
NEAT1-201ENST00000499732 IPO9Q96P70 1041 aaKnown RBP19.22■□□□□ 0.67
NEAT1-201ENST00000499732 PRAM1Q96QH2 718 aa19.22■□□□□ 0.67
NEAT1-201ENST00000499732 PUS7Q96PZ0 661 aaKnown RBP19.21■□□□□ 0.67
NEAT1-201ENST00000499732 KNSTRNQ9Y448 316 aa19.21■□□□□ 0.67
NEAT1-201ENST00000499732 FAM135BQ49AJ0 1406 aa19.2■□□□□ 0.66
NEAT1-201ENST00000499732 NPC1L1Q9UHC9 1359 aa19.2■□□□□ 0.66
NEAT1-201ENST00000499732 EVC2Q86UK5 1308 aa19.2■□□□□ 0.66
NEAT1-201ENST00000499732 KCNA6P17658 529 aa19.19■□□□□ 0.66
NEAT1-201ENST00000499732 PIK3R4Q99570 1358 aa19.19■□□□□ 0.66
NEAT1-201ENST00000499732 PTPRUQ92729 1446 aa19.18■□□□□ 0.66
NEAT1-201ENST00000499732 BLMP54132 1417 aaPredicted RBP19.18■□□□□ 0.66
NEAT1-201ENST00000499732 SAFB2Q14151 953 aaKnown RBP eCLIP19.17■□□□□ 0.66
NEAT1-201ENST00000499732 RCAN3Q9UKA8 241 aa19.17■□□□□ 0.66
NEAT1-201ENST00000499732 PAK3O75914 559 aaPredicted RBP19.16■□□□□ 0.66
NEAT1-201ENST00000499732 XRN1Q8IZH2 1706 aaKnown RBP19.16■□□□□ 0.66
NEAT1-201ENST00000499732 TCERG1O14776 1098 aaKnown RBP19.16■□□□□ 0.66
NEAT1-201ENST00000499732 DEKP35659 375 aaKnown RBP19.16■□□□□ 0.66
NEAT1-201ENST00000499732 CARD14Q9BXL6 1004 aa19.16■□□□□ 0.66
NEAT1-201ENST00000499732 STRCP1A6NGW2 1772 aa19.16■□□□□ 0.66
NEAT1-201ENST00000499732 PLEKHH1Q9ULM0 1364 aa19.15■□□□□ 0.66
NEAT1-201ENST00000499732 WAPLQ7Z5K2 1190 aa19.15■□□□□ 0.66
NEAT1-201ENST00000499732 PHF23Q9BUL5 403 aaPredicted RBP19.14■□□□□ 0.65
NEAT1-201ENST00000499732 MINK1Q8N4C8 1332 aaPredicted RBP19.14■□□□□ 0.65
NEAT1-201ENST00000499732 ROBO2Q9HCK4 1378 aa19.14■□□□□ 0.65
NEAT1-201ENST00000499732 USP32Q8NFA0 1604 aa19.14■□□□□ 0.65
NEAT1-201ENST00000499732 PROSER2Q86WR7 435 aaPredicted RBP19.14■□□□□ 0.65
NEAT1-201ENST00000499732 AMOTL2Q9Y2J4 779 aa19.14■□□□□ 0.65
NEAT1-201ENST00000499732 TMEM94Q12767 1356 aa19.13■□□□□ 0.65
NEAT1-201ENST00000499732 ZBTB47Q9UFB7 747 aaPredicted RBP19.13■□□□□ 0.65
NEAT1-201ENST00000499732 PTCH1Q13635 1447 aa19.13■□□□□ 0.65
NEAT1-201ENST00000499732 MED1Q15648 1581 aaPredicted RBP19.13■□□□□ 0.65
NEAT1-201ENST00000499732 SLC12A5Q9H2X9 1139 aa19.12■□□□□ 0.65
NEAT1-201ENST00000499732 CHD2O14647 1828 aaKnown RBP19.11■□□□□ 0.65
NEAT1-201ENST00000499732 MS4A1P11836 297 aa19.11■□□□□ 0.65
NEAT1-201ENST00000499732 CABP2Q9NPB3 220 aa19.11■□□□□ 0.65
NEAT1-201ENST00000499732 NKTRP30414 1462 aaKnown RBP19.11■□□□□ 0.65
NEAT1-201ENST00000499732 NSD3Q9BZ95 1437 aa19.1■□□□□ 0.65
NEAT1-201ENST00000499732 EXOC6Q8TAG9 804 aa19.1■□□□□ 0.65
NEAT1-201ENST00000499732 PPP2R1AP30153 589 aa19.09■□□□□ 0.65
NEAT1-201ENST00000499732 SRPK2P78362 688 aaKnown RBP19.09■□□□□ 0.65
NEAT1-201ENST00000499732 ATAD2Q6PL18 1390 aa19.08■□□□□ 0.65
NEAT1-201ENST00000499732 ANKRD36BQ8N2N9 1353 aa19.08■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 8.7 ms