RNA–Protein interactions for RNA: ENST00000498801.5

GARNL3-222, Transcript of GTPase activating Rap/RanGAP domain like 3, human

TSL 4

Gene GARNL3, Length 578 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
GARNL3-222	ENST00000498801	BCL2L12	Q9HB09	334 aa		11.64	□□□□□ -0.55
GARNL3-222	ENST00000498801	OAT	P04181	439 aa		11.63	□□□□□ -0.55
GARNL3-222	ENST00000498801	MS4A1	P11836	297 aa		11.63	□□□□□ -0.55
GARNL3-222	ENST00000498801	CLCN1	P35523	988 aa		11.63	□□□□□ -0.55
GARNL3-222	ENST00000498801	PRSS12	P56730	875 aa		11.63	□□□□□ -0.55
GARNL3-222	ENST00000498801	MDM2	Q00987	491 aa	Predicted RBP	11.63	□□□□□ -0.55
GARNL3-222	ENST00000498801	OTUD5	Q96G74	571 aa		11.63	□□□□□ -0.55
GARNL3-222	ENST00000498801	GPCPD1	Q9NPB8	672 aa		11.63	□□□□□ -0.55
GARNL3-222	ENST00000498801	EHBP1L1	Q8N3D4	1523 aa		11.63	□□□□□ -0.55
GARNL3-222	ENST00000498801	TIAM1	Q13009	1591 aa		11.62	□□□□□ -0.55
GARNL3-222	ENST00000498801	CDCA7L	Q96GN5	454 aa		11.62	□□□□□ -0.55
GARNL3-222	ENST00000498801	PLCH2	O75038	1416 aa		11.61	□□□□□ -0.55
GARNL3-222	ENST00000498801	ARID3C	A6NKF2	412 aa		11.61	□□□□□ -0.55
GARNL3-222	ENST00000498801	COL9A1	P20849	921 aa		11.61	□□□□□ -0.55
GARNL3-222	ENST00000498801	PXYLP1	Q8TE99	480 aa		11.61	□□□□□ -0.55
GARNL3-222	ENST00000498801	CFAP74	Q9C0B2	1584 aa		11.61	□□□□□ -0.55
GARNL3-222	ENST00000498801	C14orf37	Q86TY3	774 aa		11.6	□□□□□ -0.55
GARNL3-222	ENST00000498801	PPP1R3G	B7ZBB8	358 aa		11.59	□□□□□ -0.55
GARNL3-222	ENST00000498801	PTPRE	P23469	700 aa		11.59	□□□□□ -0.55
GARNL3-222	ENST00000498801	FANCA	O15360	1455 aa		11.58	□□□□□ -0.56
GARNL3-222	ENST00000498801	COL17A1	Q9UMD9	1497 aa	Predicted RBP	11.58	□□□□□ -0.56
GARNL3-222	ENST00000498801	KDM6B	O15054	1643 aa		11.58	□□□□□ -0.56
GARNL3-222	ENST00000498801	NLRP7	Q8WX94	980 aa		11.58	□□□□□ -0.56
GARNL3-222	ENST00000498801	FAM198A	Q9UFP1	575 aa		11.58	□□□□□ -0.56
GARNL3-222	ENST00000498801	ATP1B4	Q9UN42	357 aa	Predicted RBP	11.58	□□□□□ -0.56
GARNL3-222	ENST00000498801	LRRC9	Q6ZRR7	1453 aa		11.57	□□□□□ -0.56
GARNL3-222	ENST00000498801	PREX2	Q70Z35	1606 aa		11.57	□□□□□ -0.56
GARNL3-222	ENST00000498801	KCNH8	Q96L42	1107 aa		11.56	□□□□□ -0.56
GARNL3-222	ENST00000498801	MTUS2	Q5JR59	1369 aa		11.55	□□□□□ -0.56
GARNL3-222	ENST00000498801	RBM46	Q8TBY0	533 aa	Known RBP	11.55	□□□□□ -0.56
GARNL3-222	ENST00000498801	ZMYM4	Q5VZL5	1548 aa		11.55	□□□□□ -0.56
GARNL3-222	ENST00000498801	GPATCH8	Q9UKJ3	1502 aa	Known RBP	11.55	□□□□□ -0.56
GARNL3-222	ENST00000498801	FRMPD1	Q5SYB0	1578 aa		11.54	□□□□□ -0.56
GARNL3-222	ENST00000498801	SSTR3	P32745	418 aa	Predicted RBP	11.54	□□□□□ -0.56
GARNL3-222	ENST00000498801	FAM217B	Q9NTX9	383 aa	Predicted RBP	11.54	□□□□□ -0.56
GARNL3-222	ENST00000498801	TSKS	Q9UJT2	592 aa		11.54	□□□□□ -0.56
GARNL3-222	ENST00000498801	MYO5C	Q9NQX4	1742 aa		11.54	□□□□□ -0.56
GARNL3-222	ENST00000498801	AKNA	Q7Z591	1439 aa		11.53	□□□□□ -0.56
GARNL3-222	ENST00000498801	POGZ	Q7Z3K3	1410 aa		11.52	□□□□□ -0.56
GARNL3-222	ENST00000498801	ABCC1	P33527	1531 aa		11.52	□□□□□ -0.57
GARNL3-222	ENST00000498801	LHX8	Q68G74	356 aa		11.52	□□□□□ -0.57
GARNL3-222	ENST00000498801	GOPC	Q9HD26	462 aa		11.52	□□□□□ -0.57
GARNL3-222	ENST00000498801	NCOA2	Q15596	1464 aa		11.51	□□□□□ -0.57
GARNL3-222	ENST00000498801	KDM5C	P41229	1560 aa		11.51	□□□□□ -0.57
GARNL3-222	ENST00000498801	TRIM6-TRIM34	B2RNG4	842 aa		11.51	□□□□□ -0.57
GARNL3-222	ENST00000498801	KCNK17	Q96T54	332 aa		11.51	□□□□□ -0.57
GARNL3-222	ENST00000498801	KIAA1107	Q9UPP5	1409 aa		11.51	□□□□□ -0.57
GARNL3-222	ENST00000498801	DENND4B	O75064	1496 aa	Predicted RBP	11.51	□□□□□ -0.57
GARNL3-222	ENST00000498801	ADGRL1	O94910	1474 aa		11.51	□□□□□ -0.57
GARNL3-222	ENST00000498801	ARHGAP5	Q13017	1502 aa		11.5	□□□□□ -0.57
GARNL3-222	ENST00000498801	SUPT6H	Q7KZ85	1726 aa	Known RBP	11.5	□□□□□ -0.57
GARNL3-222	ENST00000498801	RPL17-C18orf32	A0A0A6YYL6	228 aa	Known RBP	11.5	□□□□□ -0.57
GARNL3-222	ENST00000498801	EYA1	Q99502	592 aa		11.5	□□□□□ -0.57
GARNL3-222	ENST00000498801	MAGI2	Q86UL8	1455 aa		11.5	□□□□□ -0.57
GARNL3-222	ENST00000498801	TSPOAP1	O95153	1857 aa		11.49	□□□□□ -0.57
GARNL3-222	ENST00000498801	NBPF26	B4DH59	902 aa		11.49	□□□□□ -0.57
GARNL3-222	ENST00000498801	C3orf80	F5H4A9	247 aa		11.49	□□□□□ -0.57
GARNL3-222	ENST00000498801	EFCAB2	Q5VUJ9	269 aa		11.49	□□□□□ -0.57
GARNL3-222	ENST00000498801	BEGAIN	Q9BUH8	593 aa		11.49	□□□□□ -0.57
GARNL3-222	ENST00000498801	ZNF518A	Q6AHZ1	1483 aa		11.49	□□□□□ -0.57
GARNL3-222	ENST00000498801	PLEKHH2	Q8IVE3	1493 aa		11.49	□□□□□ -0.57
GARNL3-222	ENST00000498801	ITSN2	Q9NZM3	1697 aa		11.49	□□□□□ -0.57
GARNL3-222	ENST00000498801	CDC42BPA	Q5VT25	1732 aa		11.49	□□□□□ -0.57
GARNL3-222	ENST00000498801	RCCD1	A6NED2	376 aa		11.48	□□□□□ -0.57
GARNL3-222	ENST00000498801	SH3D19	Q5HYK7	790 aa		11.48	□□□□□ -0.57
GARNL3-222	ENST00000498801	NUDT18	Q6ZVK8	323 aa		11.48	□□□□□ -0.57
GARNL3-222	ENST00000498801	CCNB3	Q8WWL7	1395 aa		11.48	□□□□□ -0.57
GARNL3-222	ENST00000498801	ARHGEF40	Q8TER5	1519 aa		11.48	□□□□□ -0.57
GARNL3-222	ENST00000498801	RICTOR	Q6R327	1708 aa		11.48	□□□□□ -0.57
GARNL3-222	ENST00000498801	CDC42BPB	Q9Y5S2	1711 aa		11.48	□□□□□ -0.57
GARNL3-222	ENST00000498801	SAMD9L	Q8IVG5	1584 aa		11.47	□□□□□ -0.57
GARNL3-222	ENST00000498801	MIA2	Q96PC5	1412 aa		11.47	□□□□□ -0.57
GARNL3-222	ENST00000498801	PROX2	Q3B8N5	592 aa		11.47	□□□□□ -0.57
GARNL3-222	ENST00000498801	PNMA3	Q9UL41	463 aa		11.47	□□□□□ -0.57
GARNL3-222	ENST00000498801	PACS2	Q86VP3	889 aa		11.46	□□□□□ -0.57
GARNL3-222	ENST00000498801	TATDN2	Q93075	761 aa		11.46	□□□□□ -0.57
GARNL3-222	ENST00000498801	ARHGEF12	Q9NZN5	1544 aa		11.45	□□□□□ -0.58
GARNL3-222	ENST00000498801	MYOM3	Q5VTT5	1437 aa		11.45	□□□□□ -0.58
GARNL3-222	ENST00000498801	SCAPER	Q9BY12	1400 aa		11.45	□□□□□ -0.58
GARNL3-222	ENST00000498801	VARS2	Q5ST30	1063 aa	Known RBP	11.45	□□□□□ -0.58
GARNL3-222	ENST00000498801	KANK4	Q5T7N3	995 aa	Predicted RBP	11.45	□□□□□ -0.58
GARNL3-222	ENST00000498801	PCMTD1	Q96MG8	357 aa	Predicted RBP	11.45	□□□□□ -0.58
GARNL3-222	ENST00000498801	MBD5	Q9P267	1494 aa		11.44	□□□□□ -0.58
GARNL3-222	ENST00000498801	MLH3	Q9UHC1	1453 aa		11.44	□□□□□ -0.58
GARNL3-222	ENST00000498801	ERBB3	P21860	1342 aa		11.44	□□□□□ -0.58
GARNL3-222	ENST00000498801	DNAJB2	P25686	324 aa		11.44	□□□□□ -0.58
GARNL3-222	ENST00000498801	RERE	Q9P2R6	1566 aa		11.43	□□□□□ -0.58
GARNL3-222	ENST00000498801	ONECUT3	O60422	494 aa	Predicted RBP	11.43	□□□□□ -0.58
GARNL3-222	ENST00000498801	PSEN2	P49810	448 aa		11.43	□□□□□ -0.58
GARNL3-222	ENST00000498801	ZBED2	Q9BTP6	218 aa		11.43	□□□□□ -0.58
GARNL3-222	ENST00000498801	RSPH6A	Q9H0K4	717 aa		11.43	□□□□□ -0.58
GARNL3-222	ENST00000498801	SYCP2	Q9BX26	1530 aa		11.43	□□□□□ -0.58
GARNL3-222	ENST00000498801	ST18	O60284	1047 aa		11.42	□□□□□ -0.58
GARNL3-222	ENST00000498801	CAMSAP2	Q08AD1	1489 aa		11.42	□□□□□ -0.58
GARNL3-222	ENST00000498801	TCOF1	Q13428	1488 aa	Known RBP	11.42	□□□□□ -0.58
GARNL3-222	ENST00000498801	ARHGEF5	Q12774	1597 aa		11.41	□□□□□ -0.58
GARNL3-222	ENST00000498801	HECW2	Q9P2P5	1572 aa		11.41	□□□□□ -0.58
GARNL3-222	ENST00000498801	ZFYVE16	Q7Z3T8	1539 aa		11.41	□□□□□ -0.58
GARNL3-222	ENST00000498801	SMAP	O00193	183 aa		11.41	□□□□□ -0.58
GARNL3-222	ENST00000498801	POTEE	Q6S8J3	1075 aa		11.41	□□□□□ -0.58

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