RNA–Protein interactions for RNA: ENST00000498544.5

ECHDC2-220, Transcript of enoyl-CoA hydratase domain containing 2, humanhuman

TSL 2

Gene ECHDC2, Length 985 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC2-220ENST00000498544 MSH6P52701 1360 aa25.07■■□□□ 1.6
ECHDC2-220ENST00000498544 EIF3AQ14152 1382 aaKnown RBP25.06■■□□□ 1.6
ECHDC2-220ENST00000498544 RBM33Q96EV2 1170 aaKnown RBP25.06■■□□□ 1.6
ECHDC2-220ENST00000498544 PLEKHH1Q9ULM0 1364 aa25.05■■□□□ 1.6
ECHDC2-220ENST00000498544 C14orf37Q86TY3 774 aa25.05■■□□□ 1.6
ECHDC2-220ENST00000498544 PRAM1Q96QH2 718 aa25.05■■□□□ 1.6
ECHDC2-220ENST00000498544 CARD11Q9BXL7 1154 aa25.05■■□□□ 1.6
ECHDC2-220ENST00000498544 WAPLQ7Z5K2 1190 aa25.03■■□□□ 1.6
ECHDC2-220ENST00000498544 FMN2Q9NZ56 1722 aa25.03■■□□□ 1.6
ECHDC2-220ENST00000498544 C19orf44Q9H6X5 657 aa25.02■■□□□ 1.6
ECHDC2-220ENST00000498544 POGKQ9P215 609 aa25.02■■□□□ 1.6
ECHDC2-220ENST00000498544 CENPJQ9HC77 1338 aaPredicted RBP24.98■■□□□ 1.59
ECHDC2-220ENST00000498544 CADPS2Q86UW7 1296 aa24.96■■□□□ 1.59
ECHDC2-220ENST00000498544 ATF3P18847 181 aa24.95■■□□□ 1.58
ECHDC2-220ENST00000498544 SAFB2Q14151 953 aaKnown RBP eCLIP24.95■■□□□ 1.58
ECHDC2-220ENST00000498544 USP47Q96K76 1375 aa24.94■■□□□ 1.58
ECHDC2-220ENST00000498544 SBNO2Q9Y2G9 1366 aa24.94■■□□□ 1.58
ECHDC2-220ENST00000498544 RGPD8O14715 1765 aaPredicted RBP24.94■■□□□ 1.58
ECHDC2-220ENST00000498544 ITSN1Q15811 1721 aa24.94■■□□□ 1.58
ECHDC2-220ENST00000498544 TOM1O60784 492 aa24.93■■□□□ 1.58
ECHDC2-220ENST00000498544 UBAP1LF5GYI3 381 aa24.92■■□□□ 1.58
ECHDC2-220ENST00000498544 MST1RQ04912 1400 aa24.92■■□□□ 1.58
ECHDC2-220ENST00000498544 ROBO1Q9Y6N7 1651 aa24.91■■□□□ 1.58
ECHDC2-220ENST00000498544 MINK1Q8N4C8 1332 aaPredicted RBP24.91■■□□□ 1.58
ECHDC2-220ENST00000498544 USP32Q8NFA0 1604 aa24.9■■□□□ 1.58
ECHDC2-220ENST00000498544 TULP4Q9NRJ4 1543 aa24.9■■□□□ 1.58
ECHDC2-220ENST00000498544 TOPAZ1Q8N9V7 1692 aa24.88■■□□□ 1.57
ECHDC2-220ENST00000498544 ZEB1P37275 1124 aaPredicted RBP24.87■■□□□ 1.57
ECHDC2-220ENST00000498544 HIRIP3Q9BW71 556 aaPredicted RBP24.87■■□□□ 1.57
ECHDC2-220ENST00000498544 KIF1AQ12756 1690 aa24.87■■□□□ 1.57
ECHDC2-220ENST00000498544 ANKARQ7Z5J8 1434 aa24.86■■□□□ 1.57
ECHDC2-220ENST00000498544 SLAIN2Q9P270 581 aa24.86■■□□□ 1.57
ECHDC2-220ENST00000498544 C1orf167Q5SNV9 1468 aa24.85■■□□□ 1.57
ECHDC2-220ENST00000498544 WASLO00401 505 aaPredicted RBP24.84■■□□□ 1.57
ECHDC2-220ENST00000498544 ST20-MTHFSA0A0A6YYL1 179 aa24.83■■□□□ 1.57
ECHDC2-220ENST00000498544 ATP7BP35670 1465 aa24.83■■□□□ 1.56
ECHDC2-220ENST00000498544 NHSL1Q5SYE7 1610 aa24.83■■□□□ 1.56
ECHDC2-220ENST00000498544 SLC24A1O60721 1099 aa24.81■■□□□ 1.56
ECHDC2-220ENST00000498544 EIF4G2P78344 907 aaKnown RBP eCLIP24.81■■□□□ 1.56
ECHDC2-220ENST00000498544 EVC2Q86UK5 1308 aa24.81■■□□□ 1.56
ECHDC2-220ENST00000498544 PIP4K2BP78356 416 aa24.79■■□□□ 1.56
ECHDC2-220ENST00000498544 TESK2Q96S53 571 aa24.79■■□□□ 1.56
ECHDC2-220ENST00000498544 SCAF1Q9H7N4 1312 aaKnown RBP24.79■■□□□ 1.56
ECHDC2-220ENST00000498544 AHDC1Q5TGY3 1603 aaPredicted RBP24.77■■□□□ 1.56
ECHDC2-220ENST00000498544 CDK19Q9BWU1 502 aa24.77■■□□□ 1.56
ECHDC2-220ENST00000498544 PHLPP1O60346 1717 aa24.77■■□□□ 1.56
ECHDC2-220ENST00000498544 NUTM2FA1L443 756 aa24.74■■□□□ 1.55
ECHDC2-220ENST00000498544 SRPK2P78362 688 aaKnown RBP24.74■■□□□ 1.55
ECHDC2-220ENST00000498544 BRINP3Q76B58 766 aa24.74■■□□□ 1.55
ECHDC2-220ENST00000498544 PRR36Q9H6K5 1346 aa24.73■■□□□ 1.55
ECHDC2-220ENST00000498544 HSPA5P11021 654 aaKnown RBP24.73■■□□□ 1.55
ECHDC2-220ENST00000498544 ATAD2Q6PL18 1390 aa24.71■■□□□ 1.55
ECHDC2-220ENST00000498544 ESCO1Q5FWF5 840 aa24.71■■□□□ 1.55
ECHDC2-220ENST00000498544 NUDT16Q96DE0 195 aaKnown RBP24.71■■□□□ 1.55
ECHDC2-220ENST00000498544 TMF1P82094 1093 aa24.7■■□□□ 1.54
ECHDC2-220ENST00000498544 ORAI2Q96SN7 254 aa24.7■■□□□ 1.54
ECHDC2-220ENST00000498544 COL16A1Q07092 1604 aaPredicted RBP24.7■■□□□ 1.54
ECHDC2-220ENST00000498544 AKAP12Q02952 1782 aa24.7■■□□□ 1.54
ECHDC2-220ENST00000498544 PUS7Q96PZ0 661 aaKnown RBP24.69■■□□□ 1.54
ECHDC2-220ENST00000498544 CABP2Q9NPB3 220 aa24.69■■□□□ 1.54
ECHDC2-220ENST00000498544 CCDC61Q9Y6R9 512 aa24.68■■□□□ 1.54
ECHDC2-220ENST00000498544 MYOM1P52179 1685 aa24.68■■□□□ 1.54
ECHDC2-220ENST00000498544 PPIP5K1Q6PFW1 1433 aa24.68■■□□□ 1.54
ECHDC2-220ENST00000498544 PHF8Q9UPP1 1060 aa24.66■■□□□ 1.54
ECHDC2-220ENST00000498544 CDCA8Q53HL2 280 aa24.65■■□□□ 1.54
ECHDC2-220ENST00000498544 PXDNQ92626 1479 aa24.64■■□□□ 1.54
ECHDC2-220ENST00000498544 TRPM3Q9HCF6 1732 aaPredicted RBP24.64■■□□□ 1.54
ECHDC2-220ENST00000498544 MON2Q7Z3U7 1717 aa24.64■■□□□ 1.53
ECHDC2-220ENST00000498544 NPHP3Q7Z494 1330 aa24.63■■□□□ 1.53
ECHDC2-220ENST00000498544 NINLQ9Y2I6 1382 aa24.63■■□□□ 1.53
ECHDC2-220ENST00000498544 POLR3AO14802 1390 aaPredicted RBP24.62■■□□□ 1.53
ECHDC2-220ENST00000498544 PLEKHG3A1L390 1219 aa24.61■■□□□ 1.53
ECHDC2-220ENST00000498544 HSPA1LP34931 641 aa24.61■■□□□ 1.53
ECHDC2-220ENST00000498544 SHPRHQ149N8 1683 aa24.6■■□□□ 1.53
ECHDC2-220ENST00000498544 FOXO3O43524 673 aa24.59■■□□□ 1.53
ECHDC2-220ENST00000498544 PMFBP1Q8TBY8 1022 aa24.59■■□□□ 1.53
ECHDC2-220ENST00000498544 NRKQ7Z2Y5 1582 aa24.59■■□□□ 1.53
ECHDC2-220ENST00000498544 ALS2Q96Q42 1657 aa24.58■■□□□ 1.53
ECHDC2-220ENST00000498544 SOS2Q07890 1332 aaPredicted RBP24.58■■□□□ 1.52
ECHDC2-220ENST00000498544 NGDNQ8NEJ9 315 aaKnown RBP24.56■■□□□ 1.52
ECHDC2-220ENST00000498544 CABP1Q9NZU7 370 aa24.56■■□□□ 1.52
ECHDC2-220ENST00000498544 ACEP12821 1306 aa24.56■■□□□ 1.52
ECHDC2-220ENST00000498544 DDX17Q92841 729 aaKnown RBP24.55■■□□□ 1.52
ECHDC2-220ENST00000498544 COL22A1Q8NFW1 1626 aaPredicted RBP24.54■■□□□ 1.52
ECHDC2-220ENST00000498544 CPSF1Q10570 1443 aaKnown RBP24.54■■□□□ 1.52
ECHDC2-220ENST00000498544 CD163L1Q9NR16 1453 aa24.54■■□□□ 1.52
ECHDC2-220ENST00000498544 PSME1Q06323 249 aa24.53■■□□□ 1.52
ECHDC2-220ENST00000498544 USP6P35125 1406 aa24.52■■□□□ 1.52
ECHDC2-220ENST00000498544 SBNO1A3KN83 1393 aa24.52■■□□□ 1.52
ECHDC2-220ENST00000498544 BRD4O60885 1362 aaPredicted RBP24.52■■□□□ 1.52
ECHDC2-220ENST00000498544 KRT28Q7Z3Y7 464 aa24.51■■□□□ 1.51
ECHDC2-220ENST00000498544 TMC1Q8TDI8 760 aa24.51■■□□□ 1.51
ECHDC2-220ENST00000498544 TNS3Q68CZ2 1445 aa24.51■■□□□ 1.51
ECHDC2-220ENST00000498544 XPCQ01831 940 aaPredicted RBP24.5■■□□□ 1.51
ECHDC2-220ENST00000498544 LRRC59Q96AG4 307 aaKnown RBP24.49■■□□□ 1.51
ECHDC2-220ENST00000498544 ABCA3Q99758 1704 aa24.49■■□□□ 1.51
ECHDC2-220ENST00000498544 A0A1W2PP64 1363 aa24.48■■□□□ 1.51
ECHDC2-220ENST00000498544 C11orf95C9JLR9 678 aaPredicted RBP24.48■■□□□ 1.51
ECHDC2-220ENST00000498544 KIF7Q2M1P5 1343 aa24.48■■□□□ 1.51
ECHDC2-220ENST00000498544 ANKRD36BQ8N2N9 1353 aa24.48■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms