RNA–Protein interactions for RNA: ENST00000498514.5

SGMS1-205, Transcript of sphingomyelin synthase 1, humanhuman

TSL 3

Gene SGMS1, Length 397 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGMS1-205ENST00000498514 TESPA1A2RU30 521 aaPredicted RBP7.15□□□□□ -1.26
SGMS1-205ENST00000498514 NFX1Q12986 1120 aaKnown RBP7.15□□□□□ -1.26
SGMS1-205ENST00000498514 GRIPAP1Q4V328 841 aa7.15□□□□□ -1.26
SGMS1-205ENST00000498514 SMPD1P17405 629 aa7.14□□□□□ -1.27
SGMS1-205ENST00000498514 STK17AQ9UEE5 414 aa7.14□□□□□ -1.27
SGMS1-205ENST00000498514 WIPF1O43516 503 aa7.13□□□□□ -1.27
SGMS1-205ENST00000498514 TRIM32Q13049 653 aa7.13□□□□□ -1.27
SGMS1-205ENST00000498514 Q3C1V9 767 aa7.13□□□□□ -1.27
SGMS1-205ENST00000498514 RNF19BQ6ZMZ0 732 aa7.13□□□□□ -1.27
SGMS1-205ENST00000498514 ATP13A2Q9NQ11 1180 aa7.13□□□□□ -1.27
SGMS1-205ENST00000498514 GPR37O15354 613 aa7.12□□□□□ -1.27
SGMS1-205ENST00000498514 INSM1Q01101 510 aaPredicted RBP7.12□□□□□ -1.27
SGMS1-205ENST00000498514 MRGPRX2Q96LB1 330 aa7.12□□□□□ -1.27
SGMS1-205ENST00000498514 PHOX2BQ99453 314 aa7.12□□□□□ -1.27
SGMS1-205ENST00000498514 SENP2Q9HC62 589 aa7.12□□□□□ -1.27
SGMS1-205ENST00000498514 SNRPBP14678 240 aaKnown RBP7.11□□□□□ -1.27
SGMS1-205ENST00000498514 MMP16P51512 607 aa7.11□□□□□ -1.27
SGMS1-205ENST00000498514 J3QL48 77 aa7.1□□□□□ -1.27
SGMS1-205ENST00000498514 TERTO14746 1132 aaKnown RBP7.1□□□□□ -1.27
SGMS1-205ENST00000498514 TRIM47Q96LD4 638 aa7.1□□□□□ -1.27
SGMS1-205ENST00000498514 REPIN1Q9BWE0 567 aaKnown RBP7.09□□□□□ -1.27
SGMS1-205ENST00000498514 USB1Q9BQ65 265 aaKnown RBP7.08□□□□□ -1.28
SGMS1-205ENST00000498514 DXOO77932 396 aaKnown RBP7.07□□□□□ -1.28
SGMS1-205ENST00000498514 HPS1Q92902 700 aa7.07□□□□□ -1.28
SGMS1-205ENST00000498514 KIFC2Q96AC6 838 aa7.07□□□□□ -1.28
SGMS1-205ENST00000498514 CCDC24Q8N4L8 307 aa7.06□□□□□ -1.28
SGMS1-205ENST00000498514 KDM4AO75164 1064 aa7.05□□□□□ -1.28
SGMS1-205ENST00000498514 CD46P15529 392 aa7.05□□□□□ -1.28
SGMS1-205ENST00000498514 WNT7BP56706 349 aa7.05□□□□□ -1.28
SGMS1-205ENST00000498514 LCE2CQ5TA81 110 aa7.05□□□□□ -1.28
SGMS1-205ENST00000498514 RC3H1Q5TC82 1133 aaKnown RBP7.05□□□□□ -1.28
SGMS1-205ENST00000498514 GPIHBP1Q8IV16 184 aa7.05□□□□□ -1.28
SGMS1-205ENST00000498514 USP46P62068 366 aa7.03□□□□□ -1.28
SGMS1-205ENST00000498514 ALDH1A1P00352 501 aa7.02□□□□□ -1.29
SGMS1-205ENST00000498514 SKOR1P84550 965 aa7.02□□□□□ -1.29
SGMS1-205ENST00000498514 SLC16A10Q8TF71 515 aa7.02□□□□□ -1.29
SGMS1-205ENST00000498514 HLA-CQ95604 372 aa7□□□□□ -1.29
SGMS1-205ENST00000498514 FAM181BA6NEQ2 426 aa6.99□□□□□ -1.29
SGMS1-205ENST00000498514 JUNDP17535 347 aa6.99□□□□□ -1.29
SGMS1-205ENST00000498514 NXF1Q9UBU9 619 aaKnown RBP6.99□□□□□ -1.29
SGMS1-205ENST00000498514 HOXA2O43364 376 aa6.98□□□□□ -1.29
SGMS1-205ENST00000498514 MDM2Q00987 491 aaPredicted RBP6.98□□□□□ -1.29
SGMS1-205ENST00000498514 MAP2K5Q13163 448 aa6.98□□□□□ -1.29
SGMS1-205ENST00000498514 EHBP1Q8NDI1 1231 aa6.97□□□□□ -1.29
SGMS1-205ENST00000498514 IRF6O14896 467 aa6.96□□□□□ -1.3
SGMS1-205ENST00000498514 CAPN5O15484 640 aaPredicted RBP6.96□□□□□ -1.3
SGMS1-205ENST00000498514 SIAH2O43255 324 aa6.96□□□□□ -1.3
SGMS1-205ENST00000498514 NPAS3Q8IXF0 933 aa6.96□□□□□ -1.3
SGMS1-205ENST00000498514 SYMPKQ92797 1274 aaKnown RBP6.96□□□□□ -1.3
SGMS1-205ENST00000498514 NUDT12Q9BQG2 462 aa6.96□□□□□ -1.3
SGMS1-205ENST00000498514 WASF2Q9Y6W5 498 aa6.96□□□□□ -1.3
SGMS1-205ENST00000498514 BMP1P13497 986 aa6.95□□□□□ -1.3
SGMS1-205ENST00000498514 GMPRP36959 345 aa6.95□□□□□ -1.3
SGMS1-205ENST00000498514 GUCA2AQ02747 115 aa6.95□□□□□ -1.3
SGMS1-205ENST00000498514 PTCRAQ6ISU1 281 aaPredicted RBP6.95□□□□□ -1.3
SGMS1-205ENST00000498514 IRF7Q92985 503 aa6.95□□□□□ -1.3
SGMS1-205ENST00000498514 TRIM46Q7Z4K8 759 aa6.94□□□□□ -1.3
SGMS1-205ENST00000498514 RETREG3Q86VR2 466 aa6.94□□□□□ -1.3
SGMS1-205ENST00000498514 ZSCAN1Q8NBB4 408 aa6.94□□□□□ -1.3
SGMS1-205ENST00000498514 MINK1Q8N4C8 1332 aaPredicted RBP6.94□□□□□ -1.3
SGMS1-205ENST00000498514 NUTM1Q86Y26 1132 aa6.93□□□□□ -1.3
SGMS1-205ENST00000498514 H3BM21 787 aa6.92□□□□□ -1.3
SGMS1-205ENST00000498514 CLCN1P35523 988 aa6.91□□□□□ -1.3
SGMS1-205ENST00000498514 SH3BP2P78314 561 aa6.91□□□□□ -1.3
SGMS1-205ENST00000498514 GPCPD1Q9NPB8 672 aa6.91□□□□□ -1.3
SGMS1-205ENST00000498514 FAM217BQ9NTX9 383 aaPredicted RBP6.91□□□□□ -1.3
SGMS1-205ENST00000498514 C6orf229H3BNL8 230 aa6.9□□□□□ -1.3
SGMS1-205ENST00000498514 TULP1O00294 542 aaPredicted RBP6.9□□□□□ -1.3
SGMS1-205ENST00000498514 CCNYL3P0C7X3 344 aa6.9□□□□□ -1.3
SGMS1-205ENST00000498514 MS4A1P11836 297 aa6.9□□□□□ -1.3
SGMS1-205ENST00000498514 LORP23490 312 aaPredicted RBP6.9□□□□□ -1.3
SGMS1-205ENST00000498514 VEGFBP49765 207 aa6.9□□□□□ -1.3
SGMS1-205ENST00000498514 PLCB2Q00722 1185 aa6.9□□□□□ -1.3
SGMS1-205ENST00000498514 FDX1P10109 184 aa6.89□□□□□ -1.31
SGMS1-205ENST00000498514 KRI1Q8N9T8 703 aaKnown RBP6.89□□□□□ -1.31
SGMS1-205ENST00000498514 CCDC102AQ96A19 550 aa6.89□□□□□ -1.31
SGMS1-205ENST00000498514 ZFP42Q96MM3 310 aa6.89□□□□□ -1.31
SGMS1-205ENST00000498514 ERBB4Q15303 1308 aa6.88□□□□□ -1.31
SGMS1-205ENST00000498514 PLEKHG3A1L390 1219 aa6.88□□□□□ -1.31
SGMS1-205ENST00000498514 EVA1BQ9NVM1 165 aa6.88□□□□□ -1.31
SGMS1-205ENST00000498514 PCDHGC3Q9UN70 934 aa6.88□□□□□ -1.31
SGMS1-205ENST00000498514 VARSP26640 1264 aaKnown RBP6.87□□□□□ -1.31
SGMS1-205ENST00000498514 PTPRNQ16849 979 aa6.87□□□□□ -1.31
SGMS1-205ENST00000498514 BAP1Q92560 729 aa6.87□□□□□ -1.31
SGMS1-205ENST00000498514 UNC93B1Q9H1C4 597 aa6.87□□□□□ -1.31
SGMS1-205ENST00000498514 SCARF1Q14162 830 aa6.86□□□□□ -1.31
SGMS1-205ENST00000498514 LINC01559Q495D7 138 aa6.86□□□□□ -1.31
SGMS1-205ENST00000498514 MPNDQ8N594 471 aa6.86□□□□□ -1.31
SGMS1-205ENST00000498514 TLL2Q9Y6L7 1015 aa6.86□□□□□ -1.31
SGMS1-205ENST00000498514 KCNH2Q12809 1159 aa6.85□□□□□ -1.31
SGMS1-205ENST00000498514 NNTQ13423 1086 aa6.85□□□□□ -1.31
SGMS1-205ENST00000498514 MRPL14Q6P1L8 145 aaKnown RBP6.85□□□□□ -1.31
SGMS1-205ENST00000498514 ZNF511Q8NB15 262 aa6.84□□□□□ -1.31
SGMS1-205ENST00000498514 PURBQ96QR8 312 aaKnown RBP6.83□□□□□ -1.32
SGMS1-205ENST00000498514 ADH1CP00326 375 aa6.82□□□□□ -1.32
SGMS1-205ENST00000498514 TIMP2P16035 220 aa6.82□□□□□ -1.32
SGMS1-205ENST00000498514 SSTR3P32745 418 aaPredicted RBP6.82□□□□□ -1.32
SGMS1-205ENST00000498514 WDR4P57081 412 aaKnown RBP6.82□□□□□ -1.32
SGMS1-205ENST00000498514 DESI1Q6ICB0 168 aa6.82□□□□□ -1.32
SGMS1-205ENST00000498514 PRR7Q8TB68 274 aa6.82□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms