RNA–Protein interactions for RNA: ENST00000498431.5

MUC1-220, Transcript of mucin 1, cell surface associated, humanhuman

TSL 1 (best)

Gene MUC1, Length 667 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MUC1-220ENST00000498431 FOXD1Q16676 465 aa24.26■■□□□ 1.47
MUC1-220ENST00000498431 USP21Q9UK80 565 aa24.26■■□□□ 1.47
MUC1-220ENST00000498431 CDC42BPGQ6DT37 1551 aa24.25■■□□□ 1.47
MUC1-220ENST00000498431 FNBP4Q8N3X1 1017 aaPredicted RBP24.23■■□□□ 1.47
MUC1-220ENST00000498431 MYOM2P54296 1465 aa24.23■■□□□ 1.47
MUC1-220ENST00000498431 PXDNQ92626 1479 aa24.23■■□□□ 1.47
MUC1-220ENST00000498431 ATRNO75882 1429 aa24.22■■□□□ 1.47
MUC1-220ENST00000498431 ADGRF5Q8IZF2 1346 aa24.22■■□□□ 1.47
MUC1-220ENST00000498431 ESCO1Q5FWF5 840 aa24.22■■□□□ 1.47
MUC1-220ENST00000498431 XPCQ01831 940 aaPredicted RBP24.21■■□□□ 1.47
MUC1-220ENST00000498431 TRPC5Q9UL62 973 aaPredicted RBP24.21■■□□□ 1.47
MUC1-220ENST00000498431 NPHP3Q7Z494 1330 aa24.2■■□□□ 1.46
MUC1-220ENST00000498431 ATAD2Q6PL18 1390 aa24.19■■□□□ 1.46
MUC1-220ENST00000498431 NUTM2FA1L443 756 aa24.18■■□□□ 1.46
MUC1-220ENST00000498431 FOXO3O43524 673 aa24.18■■□□□ 1.46
MUC1-220ENST00000498431 WAPLQ7Z5K2 1190 aa24.18■■□□□ 1.46
MUC1-220ENST00000498431 STK26Q9P289 416 aa24.18■■□□□ 1.46
MUC1-220ENST00000498431 MARF1Q9Y4F3 1742 aaKnown RBP24.18■■□□□ 1.46
MUC1-220ENST00000498431 IFT172Q9UG01 1749 aa24.17■■□□□ 1.46
MUC1-220ENST00000498431 BCL9LQ86UU0 1499 aa24.17■■□□□ 1.46
MUC1-220ENST00000498431 TECPR2O15040 1411 aa24.17■■□□□ 1.46
MUC1-220ENST00000498431 RGL3Q3MIN7 710 aa24.16■■□□□ 1.46
MUC1-220ENST00000498431 SPATA31E1Q6ZUB1 1445 aa24.16■■□□□ 1.46
MUC1-220ENST00000498431 PLEKHH1Q9ULM0 1364 aa24.16■■□□□ 1.46
MUC1-220ENST00000498431 CCDC144AA2RUR9 1427 aa24.14■■□□□ 1.45
MUC1-220ENST00000498431 LRPPRCP42704 1394 aaKnown RBP24.14■■□□□ 1.45
MUC1-220ENST00000498431 TMEM132EQ6IEE7 984 aa24.13■■□□□ 1.45
MUC1-220ENST00000498431 KNDC1Q76NI1 1749 aa24.13■■□□□ 1.45
MUC1-220ENST00000498431 FMN2Q9NZ56 1722 aa24.11■■□□□ 1.45
MUC1-220ENST00000498431 ABCC11Q96J66 1382 aa24.1■■□□□ 1.45
MUC1-220ENST00000498431 PIK3C2GO75747 1445 aa24.1■■□□□ 1.45
MUC1-220ENST00000498431 ANKRD30BQ9BXX2 1392 aa24.09■■□□□ 1.45
MUC1-220ENST00000498431 GJD4Q96KN9 370 aaPredicted RBP24.07■■□□□ 1.44
MUC1-220ENST00000498431 TNKS1BP1Q9C0C2 1729 aaKnown RBP24.07■■□□□ 1.44
MUC1-220ENST00000498431 MPHOSPH9Q99550 1183 aa24.06■■□□□ 1.44
MUC1-220ENST00000498431 YTHDC2Q9H6S0 1430 aaKnown RBP24.06■■□□□ 1.44
MUC1-220ENST00000498431 SPATA31A3Q5VYP0 1347 aa24.06■■□□□ 1.44
MUC1-220ENST00000498431 KIF1AQ12756 1690 aa24.05■■□□□ 1.44
MUC1-220ENST00000498431 GLI3P10071 1580 aa24.04■■□□□ 1.44
MUC1-220ENST00000498431 SLIT2O94813 1529 aa24.04■■□□□ 1.44
MUC1-220ENST00000498431 RGPD8O14715 1765 aaPredicted RBP24.03■■□□□ 1.44
MUC1-220ENST00000498431 RALGAPBQ86X10 1494 aa24.02■■□□□ 1.44
MUC1-220ENST00000498431 USP32Q8NFA0 1604 aa24.02■■□□□ 1.44
MUC1-220ENST00000498431 KRT28Q7Z3Y7 464 aa24.01■■□□□ 1.43
MUC1-220ENST00000498431 UNC5CLQ8IV45 518 aa24.01■■□□□ 1.43
MUC1-220ENST00000498431 ZRANB1Q9UGI0 708 aa23.99■■□□□ 1.43
MUC1-220ENST00000498431 BRWD3Q6RI45 1802 aa23.98■■□□□ 1.43
MUC1-220ENST00000498431 TNS3Q68CZ2 1445 aa23.97■■□□□ 1.43
MUC1-220ENST00000498431 CCDC125Q86Z20 511 aa23.97■■□□□ 1.43
MUC1-220ENST00000498431 C14orf93Q9H972 538 aaKnown RBP23.97■■□□□ 1.43
MUC1-220ENST00000498431 NRXN1Q9ULB1 1477 aa23.96■■□□□ 1.43
MUC1-220ENST00000498431 CABLES1Q8TDN4 633 aa23.96■■□□□ 1.43
MUC1-220ENST00000498431 PHF8Q9UPP1 1060 aa23.96■■□□□ 1.43
MUC1-220ENST00000498431 PLEKHG5O94827 1062 aa23.95■■□□□ 1.42
MUC1-220ENST00000498431 CFAP70Q5T0N1 1121 aa23.95■■□□□ 1.42
MUC1-220ENST00000498431 SIRT1Q96EB6 747 aa23.95■■□□□ 1.42
MUC1-220ENST00000498431 ABCA3Q99758 1704 aa23.94■■□□□ 1.42
MUC1-220ENST00000498431 PLCH1Q4KWH8 1693 aa23.94■■□□□ 1.42
MUC1-220ENST00000498431 SAFB2Q14151 953 aaKnown RBP eCLIP23.93■■□□□ 1.42
MUC1-220ENST00000498431 PRAM1Q96QH2 718 aa23.91■■□□□ 1.42
MUC1-220ENST00000498431 BLMP54132 1417 aaPredicted RBP23.91■■□□□ 1.42
MUC1-220ENST00000498431 DHX57Q6P158 1386 aaKnown RBP23.91■■□□□ 1.42
MUC1-220ENST00000498431 HAP1P54257 671 aaPredicted RBP23.9■■□□□ 1.42
MUC1-220ENST00000498431 NWD2Q9ULI1 1742 aa23.9■■□□□ 1.42
MUC1-220ENST00000498431 PSME1Q06323 249 aa23.89■■□□□ 1.41
MUC1-220ENST00000498431 DEFB132Q7Z7B7 95 aa23.89■■□□□ 1.41
MUC1-220ENST00000498431 SEPT12Q8IYM1 358 aa23.89■■□□□ 1.41
MUC1-220ENST00000498431 SBNO1A3KN83 1393 aa23.89■■□□□ 1.41
MUC1-220ENST00000498431 VPS72Q15906 364 aa23.88■■□□□ 1.41
MUC1-220ENST00000498431 LMOD2Q6P5Q4 547 aa23.88■■□□□ 1.41
MUC1-220ENST00000498431 PMFBP1Q8TBY8 1022 aa23.86■■□□□ 1.41
MUC1-220ENST00000498431 DLC1Q96QB1 1528 aa23.85■■□□□ 1.41
MUC1-220ENST00000498431 ADGRB2O60241 1585 aa23.84■■□□□ 1.41
MUC1-220ENST00000498431 ARHGEF10O15013 1369 aa23.84■■□□□ 1.41
MUC1-220ENST00000498431 CCDC9Q9Y3X0 531 aaKnown RBP23.84■■□□□ 1.41
MUC1-220ENST00000498431 TRPM3Q9HCF6 1732 aaPredicted RBP23.84■■□□□ 1.41
MUC1-220ENST00000498431 ADGRB1O14514 1584 aa23.83■■□□□ 1.41
MUC1-220ENST00000498431 FAM83GA6ND36 823 aa23.83■■□□□ 1.41
MUC1-220ENST00000498431 ONECUT3O60422 494 aaPredicted RBP23.83■■□□□ 1.41
MUC1-220ENST00000498431 ANKARQ7Z5J8 1434 aa23.83■■□□□ 1.4
MUC1-220ENST00000498431 POGKQ9P215 609 aa23.82■■□□□ 1.4
MUC1-220ENST00000498431 NRAPQ86VF7 1730 aa23.81■■□□□ 1.4
MUC1-220ENST00000498431 HIRIP3Q9BW71 556 aaPredicted RBP23.81■■□□□ 1.4
MUC1-220ENST00000498431 KRT27Q7Z3Y8 459 aa23.8■■□□□ 1.4
MUC1-220ENST00000498431 ALS2Q96Q42 1657 aa23.79■■□□□ 1.4
MUC1-220ENST00000498431 PRR36Q9H6K5 1346 aa23.79■■□□□ 1.4
MUC1-220ENST00000498431 SF3B2Q13435 895 aaKnown RBP23.78■■□□□ 1.4
MUC1-220ENST00000498431 TRAK1Q9UPV9 953 aa23.78■■□□□ 1.4
MUC1-220ENST00000498431 MINK1Q8N4C8 1332 aaPredicted RBP23.76■■□□□ 1.39
MUC1-220ENST00000498431 RAB3GAP2Q9H2M9 1393 aa23.76■■□□□ 1.39
MUC1-220ENST00000498431 FAM98CQ17RN3 349 aaKnown RBP23.75■■□□□ 1.39
MUC1-220ENST00000498431 BTG4Q9NY30 223 aa23.75■■□□□ 1.39
MUC1-220ENST00000498431 TULP4Q9NRJ4 1543 aa23.74■■□□□ 1.39
MUC1-220ENST00000498431 CRYBG1Q9Y4K1 1723 aa23.74■■□□□ 1.39
MUC1-220ENST00000498431 COL14A1Q05707 1796 aaKnown RBP23.74■■□□□ 1.39
MUC1-220ENST00000498431 A0A0G2JS52 829 aa23.74■■□□□ 1.39
MUC1-220ENST00000498431 MYT1Q01538 1121 aa23.74■■□□□ 1.39
MUC1-220ENST00000498431 ACIN1Q9UKV3 1341 aaKnown RBP23.74■■□□□ 1.39
MUC1-220ENST00000498431 KDM2AQ9Y2K7 1162 aa23.72■■□□□ 1.39
MUC1-220ENST00000498431 GPRASP1Q5JY77 1395 aa23.72■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms