RNA–Protein interactions for RNA: ENST00000498353.5

NECAB3-216, Transcript of N-terminal EF-hand calcium binding protein 3, humanhuman

TSL 3

Gene NECAB3, Length 597 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAB3-216ENST00000498353 DCAF11Q8TEB1 546 aa25.75■■□□□ 1.71
NECAB3-216ENST00000498353 LAMC1P11047 1609 aa25.74■■□□□ 1.71
NECAB3-216ENST00000498353 ORAI2Q96SN7 254 aa25.74■■□□□ 1.71
NECAB3-216ENST00000498353 CDC42BPGQ6DT37 1551 aa25.73■■□□□ 1.71
NECAB3-216ENST00000498353 PLEKHH1Q9ULM0 1364 aa25.73■■□□□ 1.71
NECAB3-216ENST00000498353 LRRC59Q96AG4 307 aaKnown RBP25.73■■□□□ 1.71
NECAB3-216ENST00000498353 DDX17Q92841 729 aaKnown RBP25.72■■□□□ 1.71
NECAB3-216ENST00000498353 KDM2AQ9Y2K7 1162 aa25.72■■□□□ 1.71
NECAB3-216ENST00000498353 SHPRHQ149N8 1683 aa25.71■■□□□ 1.71
NECAB3-216ENST00000498353 LRP6O75581 1613 aa25.67■■□□□ 1.7
NECAB3-216ENST00000498353 SOS2Q07890 1332 aaPredicted RBP25.66■■□□□ 1.7
NECAB3-216ENST00000498353 ADGRB1O14514 1584 aa25.65■■□□□ 1.7
NECAB3-216ENST00000498353 ESCO1Q5FWF5 840 aa25.65■■□□□ 1.7
NECAB3-216ENST00000498353 PRAM1Q96QH2 718 aa25.64■■□□□ 1.7
NECAB3-216ENST00000498353 DLC1Q96QB1 1528 aa25.63■■□□□ 1.69
NECAB3-216ENST00000498353 POTEAQ6S8J7 498 aa25.63■■□□□ 1.69
NECAB3-216ENST00000498353 PNPLA6Q8IY17 1366 aa25.62■■□□□ 1.69
NECAB3-216ENST00000498353 NUTM2FA1L443 756 aa25.61■■□□□ 1.69
NECAB3-216ENST00000498353 MEX3CQ5U5Q3 659 aaKnown RBP25.61■■□□□ 1.69
NECAB3-216ENST00000498353 NUTM2BA6NNL0 878 aaPredicted RBP25.6■■□□□ 1.69
NECAB3-216ENST00000498353 NUTM2EB1AL46 878 aaPredicted RBP25.6■■□□□ 1.69
NECAB3-216ENST00000498353 NUTM2AQ8IVF1 878 aaPredicted RBP25.6■■□□□ 1.69
NECAB3-216ENST00000498353 POGKQ9P215 609 aa25.6■■□□□ 1.69
NECAB3-216ENST00000498353 NPHP3Q7Z494 1330 aa25.6■■□□□ 1.69
NECAB3-216ENST00000498353 TRAK1Q9UPV9 953 aa25.59■■□□□ 1.69
NECAB3-216ENST00000498353 SAFB2Q14151 953 aaKnown RBP eCLIP25.58■■□□□ 1.69
NECAB3-216ENST00000498353 FMN2Q9NZ56 1722 aa25.57■■□□□ 1.68
NECAB3-216ENST00000498353 FOXO3O43524 673 aa25.56■■□□□ 1.68
NECAB3-216ENST00000498353 ZNF772Q68DY9 489 aaPredicted RBP25.54■■□□□ 1.68
NECAB3-216ENST00000498353 PXDNQ92626 1479 aa25.53■■□□□ 1.68
NECAB3-216ENST00000498353 ADGRB2O60241 1585 aa25.49■■□□□ 1.67
NECAB3-216ENST00000498353 XPCQ01831 940 aaPredicted RBP25.49■■□□□ 1.67
NECAB3-216ENST00000498353 PHF8Q9UPP1 1060 aa25.48■■□□□ 1.67
NECAB3-216ENST00000498353 KIF1AQ12756 1690 aa25.48■■□□□ 1.67
NECAB3-216ENST00000498353 ANKARQ7Z5J8 1434 aa25.47■■□□□ 1.67
NECAB3-216ENST00000498353 HIRIP3Q9BW71 556 aaPredicted RBP25.47■■□□□ 1.67
NECAB3-216ENST00000498353 AFF2P51816 1311 aa25.46■■□□□ 1.67
NECAB3-216ENST00000498353 MINK1Q8N4C8 1332 aaPredicted RBP25.46■■□□□ 1.67
NECAB3-216ENST00000498353 SIN3AQ96ST3 1273 aa25.46■■□□□ 1.67
NECAB3-216ENST00000498353 KIAA1210Q9ULL0 1709 aa25.46■■□□□ 1.67
NECAB3-216ENST00000498353 COL22A1Q8NFW1 1626 aaPredicted RBP25.45■■□□□ 1.67
NECAB3-216ENST00000498353 KRT28Q7Z3Y7 464 aa25.45■■□□□ 1.66
NECAB3-216ENST00000498353 L3MBTL2Q969R5 705 aa25.45■■□□□ 1.66
NECAB3-216ENST00000498353 C8orf37Q96NL8 207 aa25.45■■□□□ 1.66
NECAB3-216ENST00000498353 WASLO00401 505 aaPredicted RBP25.44■■□□□ 1.66
NECAB3-216ENST00000498353 ADAMTS2O95450 1211 aa25.44■■□□□ 1.66
NECAB3-216ENST00000498353 NBPF1Q3BBV0 1214 aa25.43■■□□□ 1.66
NECAB3-216ENST00000498353 EIF3AQ14152 1382 aaKnown RBP25.43■■□□□ 1.66
NECAB3-216ENST00000498353 SPATA31A3Q5VYP0 1347 aa25.42■■□□□ 1.66
NECAB3-216ENST00000498353 RGPD8O14715 1765 aaPredicted RBP25.42■■□□□ 1.66
NECAB3-216ENST00000498353 TRIM26Q12899 539 aaPredicted RBP25.42■■□□□ 1.66
NECAB3-216ENST00000498353 USP32Q8NFA0 1604 aa25.41■■□□□ 1.66
NECAB3-216ENST00000498353 ARHGEF28Q8N1W1 1705 aaKnown RBP25.41■■□□□ 1.66
NECAB3-216ENST00000498353 PSME1Q06323 249 aa25.41■■□□□ 1.66
NECAB3-216ENST00000498353 NGLY1Q96IV0 654 aa25.4■■□□□ 1.66
NECAB3-216ENST00000498353 PRR36Q9H6K5 1346 aa25.39■■□□□ 1.66
NECAB3-216ENST00000498353 NEUROD1Q13562 356 aa25.39■■□□□ 1.66
NECAB3-216ENST00000498353 PMFBP1Q8TBY8 1022 aa25.39■■□□□ 1.66
NECAB3-216ENST00000498353 TULP4Q9NRJ4 1543 aa25.38■■□□□ 1.65
NECAB3-216ENST00000498353 RXRBP28702 533 aa25.38■■□□□ 1.65
NECAB3-216ENST00000498353 SBNO1A3KN83 1393 aa25.36■■□□□ 1.65
NECAB3-216ENST00000498353 FNBP4Q8N3X1 1017 aaPredicted RBP25.36■■□□□ 1.65
NECAB3-216ENST00000498353 QTRT2Q9H974 415 aaKnown RBP25.35■■□□□ 1.65
NECAB3-216ENST00000498353 TNS3Q68CZ2 1445 aa25.35■■□□□ 1.65
NECAB3-216ENST00000498353 NUDT16Q96DE0 195 aaKnown RBP25.32■■□□□ 1.64
NECAB3-216ENST00000498353 CDK19Q9BWU1 502 aa25.32■■□□□ 1.64
NECAB3-216ENST00000498353 USP21Q9UK80 565 aa25.32■■□□□ 1.64
NECAB3-216ENST00000498353 RBM6P78332 1123 aaKnown RBP25.31■■□□□ 1.64
NECAB3-216ENST00000498353 CDK12Q9NYV4 1490 aaPredicted RBP25.31■■□□□ 1.64
NECAB3-216ENST00000498353 ARHGEF10O15013 1369 aa25.3■■□□□ 1.64
NECAB3-216ENST00000498353 GPRASP1Q5JY77 1395 aa25.3■■□□□ 1.64
NECAB3-216ENST00000498353 ATP7BP35670 1465 aa25.29■■□□□ 1.64
NECAB3-216ENST00000498353 NGDNQ8NEJ9 315 aaKnown RBP25.28■■□□□ 1.64
NECAB3-216ENST00000498353 CENPJQ9HC77 1338 aaPredicted RBP25.28■■□□□ 1.64
NECAB3-216ENST00000498353 TRPC5Q9UL62 973 aaPredicted RBP25.27■■□□□ 1.64
NECAB3-216ENST00000498353 LMOD2Q6P5Q4 547 aa25.26■■□□□ 1.63
NECAB3-216ENST00000498353 CCDC61Q9Y6R9 512 aa25.25■■□□□ 1.63
NECAB3-216ENST00000498353 TRPM1Q7Z4N2 1603 aa25.25■■□□□ 1.63
NECAB3-216ENST00000498353 MARF1Q9Y4F3 1742 aaKnown RBP25.24■■□□□ 1.63
NECAB3-216ENST00000498353 BCL9LQ86UU0 1499 aa25.24■■□□□ 1.63
NECAB3-216ENST00000498353 CABLES1Q8TDN4 633 aa25.24■■□□□ 1.63
NECAB3-216ENST00000498353 TRPM3Q9HCF6 1732 aaPredicted RBP25.23■■□□□ 1.63
NECAB3-216ENST00000498353 ATRNO75882 1429 aa25.22■■□□□ 1.63
NECAB3-216ENST00000498353 ROCK2O75116 1388 aaKnown RBP25.22■■□□□ 1.63
NECAB3-216ENST00000498353 HAP1P54257 671 aaPredicted RBP25.22■■□□□ 1.63
NECAB3-216ENST00000498353 ITSN1Q15811 1721 aa25.22■■□□□ 1.63
NECAB3-216ENST00000498353 PLEKHG3A1L390 1219 aa25.21■■□□□ 1.63
NECAB3-216ENST00000498353 NBPF8Q3BBV2 869 aa25.21■■□□□ 1.63
NECAB3-216ENST00000498353 SLIT2O94813 1529 aa25.2■■□□□ 1.62
NECAB3-216ENST00000498353 RGS12O14924 1447 aa25.2■■□□□ 1.62
NECAB3-216ENST00000498353 POLR3AO14802 1390 aaPredicted RBP25.19■■□□□ 1.62
NECAB3-216ENST00000498353 SRPK2P78362 688 aaKnown RBP25.19■■□□□ 1.62
NECAB3-216ENST00000498353 ACEP12821 1306 aa25.18■■□□□ 1.62
NECAB3-216ENST00000498353 ALS2Q96Q42 1657 aa25.18■■□□□ 1.62
NECAB3-216ENST00000498353 PLEKHG5O94827 1062 aa25.18■■□□□ 1.62
NECAB3-216ENST00000498353 UNC5CLQ8IV45 518 aa25.18■■□□□ 1.62
NECAB3-216ENST00000498353 TONSLQ96HA7 1378 aa25.18■■□□□ 1.62
NECAB3-216ENST00000498353 PAK3O75914 559 aaPredicted RBP25.17■■□□□ 1.62
NECAB3-216ENST00000498353 TOPAZ1Q8N9V7 1692 aa25.17■■□□□ 1.62
NECAB3-216ENST00000498353 CABP2Q9NPB3 220 aa25.16■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms