RNA–Protein interactions for RNA: ENST00000498107.5

SSBP1-214, Transcript of single stranded DNA binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSBP1, Length 636 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-214ENST00000498107 PRAM1Q96QH2 718 aa22.75■■□□□ 1.23
SSBP1-214ENST00000498107 SIPA1L2Q9P2F8 1722 aaPredicted RBP22.74■■□□□ 1.23
SSBP1-214ENST00000498107 GPRASP1Q5JY77 1395 aa22.74■■□□□ 1.23
SSBP1-214ENST00000498107 NALCNQ8IZF0 1738 aa22.72■■□□□ 1.23
SSBP1-214ENST00000498107 ARHGEF28Q8N1W1 1705 aaKnown RBP22.71■■□□□ 1.23
SSBP1-214ENST00000498107 CARD11Q9BXL7 1154 aa22.71■■□□□ 1.23
SSBP1-214ENST00000498107 EIF3AQ14152 1382 aaKnown RBP22.71■■□□□ 1.23
SSBP1-214ENST00000498107 PLEKHH1Q9ULM0 1364 aa22.71■■□□□ 1.23
SSBP1-214ENST00000498107 SAFB2Q14151 953 aaKnown RBP eCLIP22.68■■□□□ 1.22
SSBP1-214ENST00000498107 SLAIN2Q9P270 581 aa22.68■■□□□ 1.22
SSBP1-214ENST00000498107 CDC42BPGQ6DT37 1551 aa22.67■■□□□ 1.22
SSBP1-214ENST00000498107 SCAF1Q9H7N4 1312 aaKnown RBP22.67■■□□□ 1.22
SSBP1-214ENST00000498107 CENPJQ9HC77 1338 aaPredicted RBP22.66■■□□□ 1.22
SSBP1-214ENST00000498107 PIP4K2BP78356 416 aa22.66■■□□□ 1.22
SSBP1-214ENST00000498107 ADGRB2O60241 1585 aa22.63■■□□□ 1.21
SSBP1-214ENST00000498107 MINK1Q8N4C8 1332 aaPredicted RBP22.62■■□□□ 1.21
SSBP1-214ENST00000498107 MST1RQ04912 1400 aa22.62■■□□□ 1.21
SSBP1-214ENST00000498107 FMN2Q9NZ56 1722 aa22.58■■□□□ 1.21
SSBP1-214ENST00000498107 HIRIP3Q9BW71 556 aaPredicted RBP22.58■■□□□ 1.21
SSBP1-214ENST00000498107 C1orf167Q5SNV9 1468 aa22.58■■□□□ 1.2
SSBP1-214ENST00000498107 QRICH2Q9H0J4 1663 aa22.58■■□□□ 1.2
SSBP1-214ENST00000498107 WASLO00401 505 aaPredicted RBP22.57■■□□□ 1.2
SSBP1-214ENST00000498107 ROBO1Q9Y6N7 1651 aa22.57■■□□□ 1.2
SSBP1-214ENST00000498107 SLC24A1O60721 1099 aa22.56■■□□□ 1.2
SSBP1-214ENST00000498107 ANKARQ7Z5J8 1434 aa22.55■■□□□ 1.2
SSBP1-214ENST00000498107 SBNO2Q9Y2G9 1366 aa22.54■■□□□ 1.2
SSBP1-214ENST00000498107 BRINP3Q76B58 766 aa22.54■■□□□ 1.2
SSBP1-214ENST00000498107 USP47Q96K76 1375 aa22.53■■□□□ 1.2
SSBP1-214ENST00000498107 NUTM2FA1L443 756 aa22.52■■□□□ 1.2
SSBP1-214ENST00000498107 ESCO1Q5FWF5 840 aa22.52■■□□□ 1.2
SSBP1-214ENST00000498107 EVC2Q86UK5 1308 aa22.52■■□□□ 1.2
SSBP1-214ENST00000498107 TULP4Q9NRJ4 1543 aa22.52■■□□□ 1.19
SSBP1-214ENST00000498107 CDK19Q9BWU1 502 aa22.51■■□□□ 1.19
SSBP1-214ENST00000498107 ST20-MTHFSA0A0A6YYL1 179 aa22.49■■□□□ 1.19
SSBP1-214ENST00000498107 ORAI2Q96SN7 254 aa22.49■■□□□ 1.19
SSBP1-214ENST00000498107 DISP3Q9P2K9 1392 aa22.49■■□□□ 1.19
SSBP1-214ENST00000498107 SRPK2P78362 688 aaKnown RBP22.48■■□□□ 1.19
SSBP1-214ENST00000498107 HSPA1LP34931 641 aa22.47■■□□□ 1.19
SSBP1-214ENST00000498107 AHDC1Q5TGY3 1603 aaPredicted RBP22.46■■□□□ 1.19
SSBP1-214ENST00000498107 KIF1AQ12756 1690 aa22.46■■□□□ 1.19
SSBP1-214ENST00000498107 EIF4G2P78344 907 aaKnown RBP eCLIP22.46■■□□□ 1.19
SSBP1-214ENST00000498107 NUDT16Q96DE0 195 aaKnown RBP22.46■■□□□ 1.19
SSBP1-214ENST00000498107 PHF8Q9UPP1 1060 aa22.45■■□□□ 1.18
SSBP1-214ENST00000498107 USP32Q8NFA0 1604 aa22.45■■□□□ 1.18
SSBP1-214ENST00000498107 ITSN1Q15811 1721 aa22.45■■□□□ 1.18
SSBP1-214ENST00000498107 RGPD8O14715 1765 aaPredicted RBP22.45■■□□□ 1.18
SSBP1-214ENST00000498107 PHLPP1O60346 1717 aa22.44■■□□□ 1.18
SSBP1-214ENST00000498107 NPHP3Q7Z494 1330 aa22.44■■□□□ 1.18
SSBP1-214ENST00000498107 CCDC61Q9Y6R9 512 aa22.44■■□□□ 1.18
SSBP1-214ENST00000498107 NHSL1Q5SYE7 1610 aa22.43■■□□□ 1.18
SSBP1-214ENST00000498107 ATP7BP35670 1465 aa22.43■■□□□ 1.18
SSBP1-214ENST00000498107 PRR36Q9H6K5 1346 aa22.43■■□□□ 1.18
SSBP1-214ENST00000498107 TESK2Q96S53 571 aa22.42■■□□□ 1.18
SSBP1-214ENST00000498107 CABP2Q9NPB3 220 aa22.42■■□□□ 1.18
SSBP1-214ENST00000498107 ZEB1P37275 1124 aaPredicted RBP22.41■■□□□ 1.18
SSBP1-214ENST00000498107 PUS7Q96PZ0 661 aaKnown RBP22.41■■□□□ 1.18
SSBP1-214ENST00000498107 ATAD2Q6PL18 1390 aa22.4■■□□□ 1.18
SSBP1-214ENST00000498107 TMF1P82094 1093 aa22.4■■□□□ 1.18
SSBP1-214ENST00000498107 FOXO3O43524 673 aa22.39■■□□□ 1.17
SSBP1-214ENST00000498107 CDCA8Q53HL2 280 aa22.39■■□□□ 1.17
SSBP1-214ENST00000498107 ILDR2Q71H61 639 aa22.39■■□□□ 1.17
SSBP1-214ENST00000498107 SOS2Q07890 1332 aaPredicted RBP22.37■■□□□ 1.17
SSBP1-214ENST00000498107 TOPAZ1Q8N9V7 1692 aa22.37■■□□□ 1.17
SSBP1-214ENST00000498107 PSME1Q06323 249 aa22.37■■□□□ 1.17
SSBP1-214ENST00000498107 NGDNQ8NEJ9 315 aaKnown RBP22.37■■□□□ 1.17
SSBP1-214ENST00000498107 PMFBP1Q8TBY8 1022 aa22.37■■□□□ 1.17
SSBP1-214ENST00000498107 LRRC59Q96AG4 307 aaKnown RBP22.37■■□□□ 1.17
SSBP1-214ENST00000498107 COL16A1Q07092 1604 aaPredicted RBP22.37■■□□□ 1.17
SSBP1-214ENST00000498107 PLEKHG3A1L390 1219 aa22.36■■□□□ 1.17
SSBP1-214ENST00000498107 HSPA5P11021 654 aaKnown RBP22.36■■□□□ 1.17
SSBP1-214ENST00000498107 PPIP5K1Q6PFW1 1433 aa22.36■■□□□ 1.17
SSBP1-214ENST00000498107 DDX17Q92841 729 aaKnown RBP22.35■■□□□ 1.17
SSBP1-214ENST00000498107 JCADQ9P266 1359 aa22.34■■□□□ 1.17
SSBP1-214ENST00000498107 KRT28Q7Z3Y7 464 aa22.33■■□□□ 1.17
SSBP1-214ENST00000498107 CABP1Q9NZU7 370 aa22.32■■□□□ 1.16
SSBP1-214ENST00000498107 POLR3AO14802 1390 aaPredicted RBP22.32■■□□□ 1.16
SSBP1-214ENST00000498107 PXDNQ92626 1479 aa22.32■■□□□ 1.16
SSBP1-214ENST00000498107 ACEP12821 1306 aa22.31■■□□□ 1.16
SSBP1-214ENST00000498107 NINLQ9Y2I6 1382 aa22.3■■□□□ 1.16
SSBP1-214ENST00000498107 SBNO1A3KN83 1393 aa22.29■■□□□ 1.16
SSBP1-214ENST00000498107 XPCQ01831 940 aaPredicted RBP22.29■■□□□ 1.16
SSBP1-214ENST00000498107 TMC1Q8TDI8 760 aa22.28■■□□□ 1.16
SSBP1-214ENST00000498107 ZNF692Q9BU19 519 aaPredicted RBP22.28■■□□□ 1.16
SSBP1-214ENST00000498107 BRD4O60885 1362 aaPredicted RBP22.27■■□□□ 1.16
SSBP1-214ENST00000498107 SHPRHQ149N8 1683 aa22.27■■□□□ 1.16
SSBP1-214ENST00000498107 SPATA31A3Q5VYP0 1347 aa22.26■■□□□ 1.15
SSBP1-214ENST00000498107 TNS3Q68CZ2 1445 aa22.25■■□□□ 1.15
SSBP1-214ENST00000498107 SPATA31A6Q5VVP1 1343 aa22.25■■□□□ 1.15
SSBP1-214ENST00000498107 HDGFL2Q7Z4V5 671 aaPredicted RBP22.24■■□□□ 1.15
SSBP1-214ENST00000498107 TERF2IPQ9NYB0 399 aa22.24■■□□□ 1.15
SSBP1-214ENST00000498107 ARHGEF10O15013 1369 aa22.24■■□□□ 1.15
SSBP1-214ENST00000498107 PNPLA6Q8IY17 1366 aa22.24■■□□□ 1.15
SSBP1-214ENST00000498107 PAK3O75914 559 aaPredicted RBP22.22■■□□□ 1.15
SSBP1-214ENST00000498107 SLC12A5Q9H2X9 1139 aa22.22■■□□□ 1.15
SSBP1-214ENST00000498107 TRPM3Q9HCF6 1732 aaPredicted RBP22.22■■□□□ 1.15
SSBP1-214ENST00000498107 LMOD2Q6P5Q4 547 aa22.21■■□□□ 1.15
SSBP1-214ENST00000498107 USP6P35125 1406 aa22.21■■□□□ 1.15
SSBP1-214ENST00000498107 CPSF1Q10570 1443 aaKnown RBP22.21■■□□□ 1.15
SSBP1-214ENST00000498107 AKAP12Q02952 1782 aa22.2■■□□□ 1.14
SSBP1-214ENST00000498107 KTN1Q86UP2 1357 aaKnown RBP22.2■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 68.2 ms