RNA–Protein interactions for RNA: ENST00000497663.1

TNRC18-210, Transcript of trinucleotide repeat containing 18, humanhuman

TSL 2

Gene TNRC18, Length 588 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNRC18-210ENST00000497663 C14orf37Q86TY3 774 aa22.98■■□□□ 1.27
TNRC18-210ENST00000497663 DIP2AQ14689 1571 aa22.97■■□□□ 1.27
TNRC18-210ENST00000497663 PIK3R4Q99570 1358 aa22.96■■□□□ 1.27
TNRC18-210ENST00000497663 SIPA1L2Q9P2F8 1722 aaPredicted RBP22.96■■□□□ 1.27
TNRC18-210ENST00000497663 TRPM2O94759 1503 aa22.95■■□□□ 1.26
TNRC18-210ENST00000497663 SETBP1Q9Y6X0 1596 aa22.94■■□□□ 1.26
TNRC18-210ENST00000497663 SPOCK2Q92563 424 aa22.94■■□□□ 1.26
TNRC18-210ENST00000497663 PHLPP1O60346 1717 aa22.94■■□□□ 1.26
TNRC18-210ENST00000497663 NEXMIFQ5QGS0 1516 aa22.93■■□□□ 1.26
TNRC18-210ENST00000497663 NCOA3Q9Y6Q9 1424 aa22.93■■□□□ 1.26
TNRC18-210ENST00000497663 MNX1P50219 401 aaPredicted RBP22.93■■□□□ 1.26
TNRC18-210ENST00000497663 C19orf44Q9H6X5 657 aa22.93■■□□□ 1.26
TNRC18-210ENST00000497663 COL16A1Q07092 1604 aaPredicted RBP22.93■■□□□ 1.26
TNRC18-210ENST00000497663 XRN1Q8IZH2 1706 aaKnown RBP22.91■■□□□ 1.26
TNRC18-210ENST00000497663 TRIM52Q96A61 297 aa22.91■■□□□ 1.26
TNRC18-210ENST00000497663 HFM1A2PYH4 1435 aa22.91■■□□□ 1.26
TNRC18-210ENST00000497663 FARP1Q9Y4F1 1045 aaPredicted RBP22.9■■□□□ 1.26
TNRC18-210ENST00000497663 LRP6O75581 1613 aa22.89■■□□□ 1.25
TNRC18-210ENST00000497663 ATF3P18847 181 aa22.88■■□□□ 1.25
TNRC18-210ENST00000497663 BRINP3Q76B58 766 aa22.88■■□□□ 1.25
TNRC18-210ENST00000497663 CADPS2Q86UW7 1296 aa22.88■■□□□ 1.25
TNRC18-210ENST00000497663 JCADQ9P266 1359 aa22.88■■□□□ 1.25
TNRC18-210ENST00000497663 DDX17Q92841 729 aaKnown RBP22.85■■□□□ 1.25
TNRC18-210ENST00000497663 MST1RQ04912 1400 aa22.83■■□□□ 1.25
TNRC18-210ENST00000497663 AHDC1Q5TGY3 1603 aaPredicted RBP22.83■■□□□ 1.25
TNRC18-210ENST00000497663 ROBO2Q9HCK4 1378 aa22.79■■□□□ 1.24
TNRC18-210ENST00000497663 ASXL1Q8IXJ9 1541 aa22.79■■□□□ 1.24
TNRC18-210ENST00000497663 KIF1BO60333 1816 aa22.79■■□□□ 1.24
TNRC18-210ENST00000497663 SETD1AO15047 1707 aaKnown RBP22.79■■□□□ 1.24
TNRC18-210ENST00000497663 DCCP43146 1447 aa22.77■■□□□ 1.24
TNRC18-210ENST00000497663 ADGRL3Q9HAR2 1447 aa22.77■■□□□ 1.24
TNRC18-210ENST00000497663 NALCNQ8IZF0 1738 aa22.77■■□□□ 1.23
TNRC18-210ENST00000497663 AMER1Q5JTC6 1135 aaPredicted RBP22.76■■□□□ 1.23
TNRC18-210ENST00000497663 NUTM2BA6NNL0 878 aaPredicted RBP22.74■■□□□ 1.23
TNRC18-210ENST00000497663 NUTM2EB1AL46 878 aaPredicted RBP22.74■■□□□ 1.23
TNRC18-210ENST00000497663 NUTM2AQ8IVF1 878 aaPredicted RBP22.74■■□□□ 1.23
TNRC18-210ENST00000497663 SPATA31A6Q5VVP1 1343 aa22.73■■□□□ 1.23
TNRC18-210ENST00000497663 ADGRF5Q8IZF2 1346 aa22.73■■□□□ 1.23
TNRC18-210ENST00000497663 SHPRHQ149N8 1683 aa22.72■■□□□ 1.23
TNRC18-210ENST00000497663 VGFO15240 615 aaPredicted RBP22.72■■□□□ 1.23
TNRC18-210ENST00000497663 MPHOSPH9Q99550 1183 aa22.71■■□□□ 1.23
TNRC18-210ENST00000497663 PPLO60437 1756 aa22.71■■□□□ 1.23
TNRC18-210ENST00000497663 NUBP1P53384 320 aa22.7■■□□□ 1.22
TNRC18-210ENST00000497663 RGL3Q3MIN7 710 aa22.7■■□□□ 1.22
TNRC18-210ENST00000497663 MEX3CQ5U5Q3 659 aaKnown RBP22.7■■□□□ 1.22
TNRC18-210ENST00000497663 ORAI2Q96SN7 254 aa22.7■■□□□ 1.22
TNRC18-210ENST00000497663 RPGRIP1LQ68CZ1 1315 aa22.7■■□□□ 1.22
TNRC18-210ENST00000497663 NHSL1Q5SYE7 1610 aa22.7■■□□□ 1.22
TNRC18-210ENST00000497663 C1orf167Q5SNV9 1468 aa22.69■■□□□ 1.22
TNRC18-210ENST00000497663 PTCH1Q13635 1447 aa22.69■■□□□ 1.22
TNRC18-210ENST00000497663 SETD5Q9C0A6 1442 aa22.69■■□□□ 1.22
TNRC18-210ENST00000497663 SPATA31E1Q6ZUB1 1445 aa22.68■■□□□ 1.22
TNRC18-210ENST00000497663 PNPLA6Q8IY17 1366 aa22.64■■□□□ 1.22
TNRC18-210ENST00000497663 PRAG1Q86YV5 1406 aa22.64■■□□□ 1.21
TNRC18-210ENST00000497663 TMEM132EQ6IEE7 984 aa22.63■■□□□ 1.21
TNRC18-210ENST00000497663 CCDC144AA2RUR9 1427 aa22.63■■□□□ 1.21
TNRC18-210ENST00000497663 WAPLQ7Z5K2 1190 aa22.62■■□□□ 1.21
TNRC18-210ENST00000497663 FAM212AQ96EL1 285 aa22.62■■□□□ 1.21
TNRC18-210ENST00000497663 STK26Q9P289 416 aa22.62■■□□□ 1.21
TNRC18-210ENST00000497663 PLEKHH1Q9ULM0 1364 aa22.62■■□□□ 1.21
TNRC18-210ENST00000497663 LRRC59Q96AG4 307 aaKnown RBP22.61■■□□□ 1.21
TNRC18-210ENST00000497663 RTN4Q9NQC3 1192 aaKnown RBP22.61■■□□□ 1.21
TNRC18-210ENST00000497663 AFF2P51816 1311 aa22.6■■□□□ 1.21
TNRC18-210ENST00000497663 ZNF772Q68DY9 489 aaPredicted RBP22.6■■□□□ 1.21
TNRC18-210ENST00000497663 RASEFQ8IZ41 740 aa22.59■■□□□ 1.21
TNRC18-210ENST00000497663 CIZ1Q9ULV3 898 aaPredicted RBP22.58■■□□□ 1.21
TNRC18-210ENST00000497663 SOS2Q07890 1332 aaPredicted RBP22.57■■□□□ 1.2
TNRC18-210ENST00000497663 NUTM2FA1L443 756 aa22.57■■□□□ 1.2
TNRC18-210ENST00000497663 C8orf37Q96NL8 207 aa22.57■■□□□ 1.2
TNRC18-210ENST00000497663 IFT172Q9UG01 1749 aa22.57■■□□□ 1.2
TNRC18-210ENST00000497663 ADAMTS2O95450 1211 aa22.56■■□□□ 1.2
TNRC18-210ENST00000497663 GSE1Q14687 1217 aa22.56■■□□□ 1.2
TNRC18-210ENST00000497663 POTEHQ6S545 545 aa22.56■■□□□ 1.2
TNRC18-210ENST00000497663 XPCQ01831 940 aaPredicted RBP22.55■■□□□ 1.2
TNRC18-210ENST00000497663 DCAF8Q5TAQ9 597 aa22.55■■□□□ 1.2
TNRC18-210ENST00000497663 LAMC1P11047 1609 aa22.55■■□□□ 1.2
TNRC18-210ENST00000497663 PIK3C2GO75747 1445 aa22.55■■□□□ 1.2
TNRC18-210ENST00000497663 LRPPRCP42704 1394 aaKnown RBP22.54■■□□□ 1.2
TNRC18-210ENST00000497663 RXRBP28702 533 aa22.53■■□□□ 1.2
TNRC18-210ENST00000497663 ANKRD30BQ9BXX2 1392 aa22.52■■□□□ 1.2
TNRC18-210ENST00000497663 TECPR2O15040 1411 aa22.52■■□□□ 1.2
TNRC18-210ENST00000497663 PAK3O75914 559 aaPredicted RBP22.52■■□□□ 1.2
TNRC18-210ENST00000497663 ESCO1Q5FWF5 840 aa22.52■■□□□ 1.2
TNRC18-210ENST00000497663 UPF1Q92900 1129 aaKnown RBP eCLIP22.51■■□□□ 1.19
TNRC18-210ENST00000497663 RAB3GAP2Q9H2M9 1393 aa22.5■■□□□ 1.19
TNRC18-210ENST00000497663 CDC42BPGQ6DT37 1551 aa22.5■■□□□ 1.19
TNRC18-210ENST00000497663 CFAP70Q5T0N1 1121 aa22.5■■□□□ 1.19
TNRC18-210ENST00000497663 ABCC11Q96J66 1382 aa22.5■■□□□ 1.19
TNRC18-210ENST00000497663 FOXO3O43524 673 aa22.49■■□□□ 1.19
TNRC18-210ENST00000497663 PXDNQ92626 1479 aa22.48■■□□□ 1.19
TNRC18-210ENST00000497663 TSPYL2Q9H2G4 693 aaPredicted RBP22.48■■□□□ 1.19
TNRC18-210ENST00000497663 QTRT2Q9H974 415 aaKnown RBP22.48■■□□□ 1.19
TNRC18-210ENST00000497663 YTHDC2Q9H6S0 1430 aaKnown RBP22.48■■□□□ 1.19
TNRC18-210ENST00000497663 C14orf93Q9H972 538 aaKnown RBP22.47■■□□□ 1.19
TNRC18-210ENST00000497663 RGS12O14924 1447 aa22.47■■□□□ 1.19
TNRC18-210ENST00000497663 CD44P16070 742 aaKnown RBP22.46■■□□□ 1.19
TNRC18-210ENST00000497663 NGLY1Q96IV0 654 aa22.46■■□□□ 1.19
TNRC18-210ENST00000497663 NRXN1Q9ULB1 1477 aa22.46■■□□□ 1.19
TNRC18-210ENST00000497663 KNDC1Q76NI1 1749 aa22.43■■□□□ 1.18
TNRC18-210ENST00000497663 MYOM2P54296 1465 aa22.42■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms