RNA–Protein interactions for RNA: ENST00000497637.5

ACTN4-208, Transcript of actinin alpha 4, humanhuman

TSL 2

Gene ACTN4, Length 877 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-208ENST00000497637 ANKRD30BQ9BXX2 1392 aa28.35■■■□□ 2.13
ACTN4-208ENST00000497637 XRN1Q8IZH2 1706 aaKnown RBP28.34■■■□□ 2.13
ACTN4-208ENST00000497637 UNC13BO14795 1591 aa28.33■■■□□ 2.13
ACTN4-208ENST00000497637 NUP155O75694 1391 aa28.31■■■□□ 2.12
ACTN4-208ENST00000497637 TONSLQ96HA7 1378 aa28.31■■■□□ 2.12
ACTN4-208ENST00000497637 BLMP54132 1417 aaPredicted RBP28.31■■■□□ 2.12
ACTN4-208ENST00000497637 C1orf167Q5SNV9 1468 aa28.31■■■□□ 2.12
ACTN4-208ENST00000497637 GJD4Q96KN9 370 aaPredicted RBP28.29■■■□□ 2.12
ACTN4-208ENST00000497637 METP08581 1390 aa28.28■■■□□ 2.12
ACTN4-208ENST00000497637 LAMC1P11047 1609 aa28.26■■■□□ 2.11
ACTN4-208ENST00000497637 SF3B2Q13435 895 aaKnown RBP28.26■■■□□ 2.11
ACTN4-208ENST00000497637 BCL9LQ86UU0 1499 aa28.25■■■□□ 2.11
ACTN4-208ENST00000497637 ORAI2Q96SN7 254 aa28.22■■■□□ 2.11
ACTN4-208ENST00000497637 LRP5O75197 1615 aa28.21■■■□□ 2.11
ACTN4-208ENST00000497637 NRXN3Q9Y4C0 1643 aa28.19■■■□□ 2.1
ACTN4-208ENST00000497637 ZNF326Q5BKZ1 582 aaKnown RBP28.19■■■□□ 2.1
ACTN4-208ENST00000497637 DEFB132Q7Z7B7 95 aa28.18■■■□□ 2.1
ACTN4-208ENST00000497637 MYOM2P54296 1465 aa28.18■■■□□ 2.1
ACTN4-208ENST00000497637 E9PCH4 1651 aa28.17■■■□□ 2.1
ACTN4-208ENST00000497637 COL22A1Q8NFW1 1626 aaPredicted RBP28.17■■■□□ 2.1
ACTN4-208ENST00000497637 NPHP3Q7Z494 1330 aa28.17■■■□□ 2.1
ACTN4-208ENST00000497637 NALCNQ8IZF0 1738 aa28.15■■■□□ 2.1
ACTN4-208ENST00000497637 UNC5CLQ8IV45 518 aa28.14■■■□□ 2.1
ACTN4-208ENST00000497637 IQGAP3Q86VI3 1631 aa28.12■■■□□ 2.09
ACTN4-208ENST00000497637 DIEXFQ68CQ4 756 aaKnown RBP28.12■■■□□ 2.09
ACTN4-208ENST00000497637 RALGAPBQ86X10 1494 aa28.08■■■□□ 2.09
ACTN4-208ENST00000497637 L3MBTL2Q969R5 705 aa28.08■■■□□ 2.09
ACTN4-208ENST00000497637 ESCO1Q5FWF5 840 aa28.06■■■□□ 2.08
ACTN4-208ENST00000497637 LRPPRCP42704 1394 aaKnown RBP28.05■■■□□ 2.08
ACTN4-208ENST00000497637 SEPT12Q8IYM1 358 aa28.05■■■□□ 2.08
ACTN4-208ENST00000497637 ROBO2Q9HCK4 1378 aa28.04■■■□□ 2.08
ACTN4-208ENST00000497637 BAG6P46379 1132 aa28.03■■■□□ 2.08
ACTN4-208ENST00000497637 SLIT2O94813 1529 aa28.02■■■□□ 2.08
ACTN4-208ENST00000497637 SPHKAPQ2M3C7 1700 aa28.01■■■□□ 2.07
ACTN4-208ENST00000497637 TNKS1BP1Q9C0C2 1729 aaKnown RBP28.01■■■□□ 2.07
ACTN4-208ENST00000497637 PSDA5PKW4 1024 aaPredicted RBP28.01■■■□□ 2.07
ACTN4-208ENST00000497637 FOXO3O43524 673 aa28.01■■■□□ 2.07
ACTN4-208ENST00000497637 PXDNQ92626 1479 aa28.01■■■□□ 2.07
ACTN4-208ENST00000497637 ONECUT3O60422 494 aaPredicted RBP28■■■□□ 2.07
ACTN4-208ENST00000497637 PRAG1Q86YV5 1406 aa28■■■□□ 2.07
ACTN4-208ENST00000497637 GLI3P10071 1580 aa27.99■■■□□ 2.07
ACTN4-208ENST00000497637 MARF1Q9Y4F3 1742 aaKnown RBP27.99■■■□□ 2.07
ACTN4-208ENST00000497637 KRT27Q7Z3Y8 459 aa27.99■■■□□ 2.07
ACTN4-208ENST00000497637 VGFO15240 615 aaPredicted RBP27.98■■■□□ 2.07
ACTN4-208ENST00000497637 VPS72Q15906 364 aa27.97■■■□□ 2.07
ACTN4-208ENST00000497637 XPCQ01831 940 aaPredicted RBP27.95■■■□□ 2.06
ACTN4-208ENST00000497637 NEXMIFQ5QGS0 1516 aa27.94■■■□□ 2.06
ACTN4-208ENST00000497637 CCDC9Q9Y3X0 531 aaKnown RBP27.9■■■□□ 2.06
ACTN4-208ENST00000497637 SPATA31A3Q5VYP0 1347 aa27.9■■■□□ 2.06
ACTN4-208ENST00000497637 BRWD3Q6RI45 1802 aa27.88■■■□□ 2.05
ACTN4-208ENST00000497637 YY1P25490 414 aa27.88■■■□□ 2.05
ACTN4-208ENST00000497637 HAP1P54257 671 aaPredicted RBP27.88■■■□□ 2.05
ACTN4-208ENST00000497637 CDC42BPGQ6DT37 1551 aa27.87■■■□□ 2.05
ACTN4-208ENST00000497637 NBPF8Q3BBV2 869 aa27.87■■■□□ 2.05
ACTN4-208ENST00000497637 CCDC144AA2RUR9 1427 aa27.86■■■□□ 2.05
ACTN4-208ENST00000497637 R3HDM1Q15032 1099 aaKnown RBP27.84■■■□□ 2.05
ACTN4-208ENST00000497637 RPGRIP1LQ68CZ1 1315 aa27.83■■■□□ 2.05
ACTN4-208ENST00000497637 A0A0G2JS52 829 aa27.82■■■□□ 2.04
ACTN4-208ENST00000497637 MYT1Q01538 1121 aa27.82■■■□□ 2.04
ACTN4-208ENST00000497637 EN1Q05925 392 aaPredicted RBP27.81■■■□□ 2.04
ACTN4-208ENST00000497637 USP32Q8NFA0 1604 aa27.8■■■□□ 2.04
ACTN4-208ENST00000497637 KRT28Q7Z3Y7 464 aa27.79■■■□□ 2.04
ACTN4-208ENST00000497637 PSME1Q06323 249 aa27.77■■■□□ 2.04
ACTN4-208ENST00000497637 NUTM2FA1L443 756 aa27.76■■■□□ 2.03
ACTN4-208ENST00000497637 CLTCL1P53675 1640 aa27.76■■■□□ 2.03
ACTN4-208ENST00000497637 EIF4G2P78344 907 aaKnown RBP eCLIP27.75■■■□□ 2.03
ACTN4-208ENST00000497637 DISP2A7MBM2 1401 aa27.75■■■□□ 2.03
ACTN4-208ENST00000497637 NWD2Q9ULI1 1742 aa27.73■■■□□ 2.03
ACTN4-208ENST00000497637 DCAF8L1A6NGE4 600 aa27.72■■■□□ 2.03
ACTN4-208ENST00000497637 HSPA5P11021 654 aaKnown RBP27.72■■■□□ 2.03
ACTN4-208ENST00000497637 FAM98CQ17RN3 349 aaKnown RBP27.72■■■□□ 2.03
ACTN4-208ENST00000497637 CABLES1Q8TDN4 633 aa27.71■■■□□ 2.03
ACTN4-208ENST00000497637 KIF1BO60333 1816 aa27.71■■■□□ 2.03
ACTN4-208ENST00000497637 TNS3Q68CZ2 1445 aa27.7■■■□□ 2.03
ACTN4-208ENST00000497637 DCAF11Q8TEB1 546 aa27.7■■■□□ 2.02
ACTN4-208ENST00000497637 FAM83GA6ND36 823 aa27.69■■■□□ 2.02
ACTN4-208ENST00000497637 HIRIP3Q9BW71 556 aaPredicted RBP27.69■■■□□ 2.02
ACTN4-208ENST00000497637 ARHGEF10O15013 1369 aa27.69■■■□□ 2.02
ACTN4-208ENST00000497637 WAPLQ7Z5K2 1190 aa27.68■■■□□ 2.02
ACTN4-208ENST00000497637 SBNO1A3KN83 1393 aa27.67■■■□□ 2.02
ACTN4-208ENST00000497637 KIF1AQ12756 1690 aa27.67■■■□□ 2.02
ACTN4-208ENST00000497637 TECPR2O15040 1411 aa27.67■■■□□ 2.02
ACTN4-208ENST00000497637 SPATA31E1Q6ZUB1 1445 aa27.67■■■□□ 2.02
ACTN4-208ENST00000497637 RGPD1P0DJD0 1748 aa27.65■■■□□ 2.02
ACTN4-208ENST00000497637 MIER1Q8N108 512 aa27.65■■■□□ 2.02
ACTN4-208ENST00000497637 STK26Q9P289 416 aa27.65■■■□□ 2.02
ACTN4-208ENST00000497637 KDM2AQ9Y2K7 1162 aa27.65■■■□□ 2.02
ACTN4-208ENST00000497637 PARD3Q8TEW0 1356 aa27.64■■■□□ 2.02
ACTN4-208ENST00000497637 EZH2Q15910 746 aaKnown RBP27.64■■■□□ 2.02
ACTN4-208ENST00000497637 LMOD2Q6P5Q4 547 aa27.64■■■□□ 2.02
ACTN4-208ENST00000497637 PHF8Q9UPP1 1060 aa27.64■■■□□ 2.02
ACTN4-208ENST00000497637 ABCC11Q96J66 1382 aa27.63■■■□□ 2.01
ACTN4-208ENST00000497637 PLCH1Q4KWH8 1693 aa27.63■■■□□ 2.01
ACTN4-208ENST00000497637 RGL3Q3MIN7 710 aa27.63■■■□□ 2.01
ACTN4-208ENST00000497637 CAMKK2Q96RR4 588 aa27.63■■■□□ 2.01
ACTN4-208ENST00000497637 STAC3Q96MF2 364 aa27.62■■■□□ 2.01
ACTN4-208ENST00000497637 BTG4Q9NY30 223 aa27.62■■■□□ 2.01
ACTN4-208ENST00000497637 PLEKHG5O94827 1062 aa27.61■■■□□ 2.01
ACTN4-208ENST00000497637 FAM182BQ5T319 152 aa27.59■■■□□ 2.01
ACTN4-208ENST00000497637 FAM196AQ6ZSG2 479 aa27.59■■■□□ 2.01
Retrieved 100 of 20,778 RNA–protein pairs in 58.4 ms