RNA–Protein interactions for RNA: ENST00000497015.5

SRSF4-205, Transcript of serine and arginine rich splicing factor 4, humanhuman

TSL 2

Gene SRSF4, Length 516 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF4-205ENST00000497015 PTCH1Q13635 1447 aa15.16■□□□□ 0.02
SRSF4-205ENST00000497015 LAMC1P11047 1609 aa15.15■□□□□ 0.02
SRSF4-205ENST00000497015 NALCNQ8IZF0 1738 aa15.13■□□□□ 0.01
SRSF4-205ENST00000497015 FAM50AQ14320 339 aaKnown RBP15.11■□□□□ 0.01
SRSF4-205ENST00000497015 MYOM2P54296 1465 aa15.11■□□□□ 0.01
SRSF4-205ENST00000497015 ROBO2Q9HCK4 1378 aa15.11■□□□□ 0.01
SRSF4-205ENST00000497015 BLMP54132 1417 aaPredicted RBP15.1■□□□□ 0.01
SRSF4-205ENST00000497015 COL22A1Q8NFW1 1626 aaPredicted RBP15.09■□□□□ 0.01
SRSF4-205ENST00000497015 XPCQ01831 940 aaPredicted RBP15.08■□□□□ 0
SRSF4-205ENST00000497015 ZNF326Q5BKZ1 582 aaKnown RBP15.08■□□□□ 0
SRSF4-205ENST00000497015 PSDA5PKW4 1024 aaPredicted RBP15.07■□□□□ 0
SRSF4-205ENST00000497015 UNC5CLQ8IV45 518 aa15.07■□□□□ 0
SRSF4-205ENST00000497015 RALGAPBQ86X10 1494 aa15.07■□□□□ 0
SRSF4-205ENST00000497015 GLI3P10071 1580 aa15.07■□□□□ 0
SRSF4-205ENST00000497015 HRCP23327 699 aa15.06■□□□□ 0
SRSF4-205ENST00000497015 NUP155O75694 1391 aa15.06■□□□□ 0
SRSF4-205ENST00000497015 FOXO3O43524 673 aa15.05■□□□□ -0
SRSF4-205ENST00000497015 PXDNQ92626 1479 aa15.05■□□□□ -0
SRSF4-205ENST00000497015 LRP5O75197 1615 aa15.05■□□□□ -0
SRSF4-205ENST00000497015 IQGAP3Q86VI3 1631 aa15.04■□□□□ -0
SRSF4-205ENST00000497015 SLIT2O94813 1529 aa15.04■□□□□ -0
SRSF4-205ENST00000497015 ONECUT3O60422 494 aaPredicted RBP15.04■□□□□ -0
SRSF4-205ENST00000497015 ESCO1Q5FWF5 840 aa15.04■□□□□ -0
SRSF4-205ENST00000497015 SEPT12Q8IYM1 358 aa15.04■□□□□ -0
SRSF4-205ENST00000497015 BRWD3Q6RI45 1802 aa15.02■□□□□ -0
SRSF4-205ENST00000497015 NEXMIFQ5QGS0 1516 aa15.02□□□□□ -0.01
SRSF4-205ENST00000497015 NPHP3Q7Z494 1330 aa15.01□□□□□ -0.01
SRSF4-205ENST00000497015 MARF1Q9Y4F3 1742 aaKnown RBP15□□□□□ -0.01
SRSF4-205ENST00000497015 NUTM2FA1L443 756 aa14.98□□□□□ -0.01
SRSF4-205ENST00000497015 SF3B2Q13435 895 aaKnown RBP14.98□□□□□ -0.01
SRSF4-205ENST00000497015 ROCK1Q13464 1354 aa14.98□□□□□ -0.01
SRSF4-205ENST00000497015 SPATA31A3Q5VYP0 1347 aa14.97□□□□□ -0.01
SRSF4-205ENST00000497015 VPS72Q15906 364 aa14.97□□□□□ -0.01
SRSF4-205ENST00000497015 KRT27Q7Z3Y8 459 aa14.97□□□□□ -0.01
SRSF4-205ENST00000497015 PRAG1Q86YV5 1406 aa14.97□□□□□ -0.01
SRSF4-205ENST00000497015 EN1Q05925 392 aaPredicted RBP14.96□□□□□ -0.01
SRSF4-205ENST00000497015 CABLES1Q8TDN4 633 aa14.96□□□□□ -0.01
SRSF4-205ENST00000497015 TNKS1BP1Q9C0C2 1729 aaKnown RBP14.96□□□□□ -0.01
SRSF4-205ENST00000497015 WAPLQ7Z5K2 1190 aa14.95□□□□□ -0.02
SRSF4-205ENST00000497015 HFM1A2PYH4 1435 aa14.94□□□□□ -0.02
SRSF4-205ENST00000497015 VGFO15240 615 aaPredicted RBP14.94□□□□□ -0.02
SRSF4-205ENST00000497015 R3HDM1Q15032 1099 aaKnown RBP14.94□□□□□ -0.02
SRSF4-205ENST00000497015 CLTCL1P53675 1640 aa14.94□□□□□ -0.02
SRSF4-205ENST00000497015 SPHKAPQ2M3C7 1700 aa14.93□□□□□ -0.02
SRSF4-205ENST00000497015 FAM182BQ5T319 152 aa14.93□□□□□ -0.02
SRSF4-205ENST00000497015 FAM83GA6ND36 823 aa14.92□□□□□ -0.02
SRSF4-205ENST00000497015 BAG6P46379 1132 aa14.92□□□□□ -0.02
SRSF4-205ENST00000497015 KRT28Q7Z3Y7 464 aa14.92□□□□□ -0.02
SRSF4-205ENST00000497015 ITGAEP38570 1179 aa14.9□□□□□ -0.02
SRSF4-205ENST00000497015 NAIPQ13075 1403 aa14.9□□□□□ -0.02
SRSF4-205ENST00000497015 LRPPRCP42704 1394 aaKnown RBP14.89□□□□□ -0.03
SRSF4-205ENST00000497015 PLEKHH1Q9ULM0 1364 aa14.89□□□□□ -0.03
SRSF4-205ENST00000497015 PLEKHG5O94827 1062 aa14.89□□□□□ -0.03
SRSF4-205ENST00000497015 CCDC9Q9Y3X0 531 aaKnown RBP14.89□□□□□ -0.03
SRSF4-205ENST00000497015 CDC42BPGQ6DT37 1551 aa14.89□□□□□ -0.03
SRSF4-205ENST00000497015 YY1P25490 414 aa14.88□□□□□ -0.03
SRSF4-205ENST00000497015 EZH2Q15910 746 aaKnown RBP14.88□□□□□ -0.03
SRSF4-205ENST00000497015 FAM98CQ17RN3 349 aaKnown RBP14.88□□□□□ -0.03
SRSF4-205ENST00000497015 STK26Q9P289 416 aa14.88□□□□□ -0.03
SRSF4-205ENST00000497015 USP32Q8NFA0 1604 aa14.88□□□□□ -0.03
SRSF4-205ENST00000497015 CAMKK2Q96RR4 588 aa14.86□□□□□ -0.03
SRSF4-205ENST00000497015 RPGRIP1LQ68CZ1 1315 aa14.86□□□□□ -0.03
SRSF4-205ENST00000497015 ADGRF5Q8IZF2 1346 aa14.86□□□□□ -0.03
SRSF4-205ENST00000497015 TMEM132EQ6IEE7 984 aa14.85□□□□□ -0.03
SRSF4-205ENST00000497015 FKBP8Q14318 412 aa14.82□□□□□ -0.04
SRSF4-205ENST00000497015 BTG4Q9NY30 223 aa14.82□□□□□ -0.04
SRSF4-205ENST00000497015 PHF8Q9UPP1 1060 aa14.82□□□□□ -0.04
SRSF4-205ENST00000497015 CCDC144AA2RUR9 1427 aa14.82□□□□□ -0.04
SRSF4-205ENST00000497015 DISP2A7MBM2 1401 aa14.82□□□□□ -0.04
SRSF4-205ENST00000497015 TNS3Q68CZ2 1445 aa14.82□□□□□ -0.04
SRSF4-205ENST00000497015 PLCH1Q4KWH8 1693 aa14.81□□□□□ -0.04
SRSF4-205ENST00000497015 KIF1BO60333 1816 aa14.81□□□□□ -0.04
SRSF4-205ENST00000497015 A0A0G2JS52 829 aa14.81□□□□□ -0.04
SRSF4-205ENST00000497015 HAP1P54257 671 aaPredicted RBP14.81□□□□□ -0.04
SRSF4-205ENST00000497015 MYT1Q01538 1121 aa14.81□□□□□ -0.04
SRSF4-205ENST00000497015 ABCC11Q96J66 1382 aa14.81□□□□□ -0.04
SRSF4-205ENST00000497015 TECPR2O15040 1411 aa14.81□□□□□ -0.04
SRSF4-205ENST00000497015 RRBP1Q9P2E9 1410 aaKnown RBP14.81□□□□□ -0.04
SRSF4-205ENST00000497015 NWD2Q9ULI1 1742 aa14.8□□□□□ -0.04
SRSF4-205ENST00000497015 SBNO1A3KN83 1393 aa14.79□□□□□ -0.04
SRSF4-205ENST00000497015 TRIM37O94972 964 aa14.79□□□□□ -0.04
SRSF4-205ENST00000497015 PSME1Q06323 249 aa14.79□□□□□ -0.04
SRSF4-205ENST00000497015 SPATA31A5Q5VU36 1347 aa14.79□□□□□ -0.04
SRSF4-205ENST00000497015 LMOD2Q6P5Q4 547 aa14.79□□□□□ -0.04
SRSF4-205ENST00000497015 SPATA31A7Q8IWB4 1347 aa14.79□□□□□ -0.04
SRSF4-205ENST00000497015 RNF216Q9NWF9 866 aaPredicted RBP14.78□□□□□ -0.04
SRSF4-205ENST00000497015 FMN2Q9NZ56 1722 aa14.78□□□□□ -0.04
SRSF4-205ENST00000497015 PPLO60437 1756 aa14.77□□□□□ -0.05
SRSF4-205ENST00000497015 NRAPQ86VF7 1730 aa14.77□□□□□ -0.05
SRSF4-205ENST00000497015 RGPD8O14715 1765 aaPredicted RBP14.76□□□□□ -0.05
SRSF4-205ENST00000497015 ABCA3Q99758 1704 aa14.75□□□□□ -0.05
SRSF4-205ENST00000497015 TNS1Q9HBL0 1735 aaKnown RBP14.75□□□□□ -0.05
SRSF4-205ENST00000497015 ATXN8OSP0DMR3 200 aa14.75□□□□□ -0.05
SRSF4-205ENST00000497015 PMFBP1Q8TBY8 1022 aa14.75□□□□□ -0.05
SRSF4-205ENST00000497015 SIRT1Q96EB6 747 aa14.75□□□□□ -0.05
SRSF4-205ENST00000497015 NRXN1Q9ULB1 1477 aa14.75□□□□□ -0.05
SRSF4-205ENST00000497015 RGPD1P0DJD0 1748 aa14.75□□□□□ -0.05
SRSF4-205ENST00000497015 KIF1AQ12756 1690 aa14.74□□□□□ -0.05
SRSF4-205ENST00000497015 APBA3O96018 575 aa14.74□□□□□ -0.05
SRSF4-205ENST00000497015 RGL3Q3MIN7 710 aa14.74□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms