RNA–Protein interactions for RNA: ENST00000496549.5

CRNKL1-205, Transcript of crooked neck pre-mRNA splicing factor 1, humanhuman

TSL 1 (best)

Gene CRNKL1, Length 4,093 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNKL1-205ENST00000496549 U2SURPO15042 1029 aaKnown RBP9.92□□□□□ -0.82
CRNKL1-205ENST00000496549 MNS1Q8NEH6 495 aa9.92□□□□□ -0.82
CRNKL1-205ENST00000496549 ATP2B3Q16720 1220 aa9.92□□□□□ -0.82
CRNKL1-205ENST00000496549 TXLNBQ8N3L3 684 aa9.92□□□□□ -0.82
CRNKL1-205ENST00000496549 PRDM2Q13029 1718 aa9.92□□□□□ -0.82
CRNKL1-205ENST00000496549 ST18O60284 1047 aa9.92□□□□□ -0.82
CRNKL1-205ENST00000496549 MPNDQ8N594 471 aa9.92□□□□□ -0.82
CRNKL1-205ENST00000496549 TSC1Q92574 1164 aa9.92□□□□□ -0.82
CRNKL1-205ENST00000496549 GEMIN8Q9NWZ8 242 aaKnown RBP9.92□□□□□ -0.82
CRNKL1-205ENST00000496549 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP9.92□□□□□ -0.82
CRNKL1-205ENST00000496549 SYCE3A1L190 88 aa9.92□□□□□ -0.82
CRNKL1-205ENST00000496549 ZNF445P59923 1031 aa9.92□□□□□ -0.82
CRNKL1-205ENST00000496549 RAB3GAP1Q15042 981 aa9.92□□□□□ -0.82
CRNKL1-205ENST00000496549 LEKR1Q6ZMV7 388 aa9.92□□□□□ -0.82
CRNKL1-205ENST00000496549 PDZRN3Q9UPQ7 1066 aa9.92□□□□□ -0.82
CRNKL1-205ENST00000496549 CCDC9Q9Y3X0 531 aaKnown RBP9.92□□□□□ -0.82
CRNKL1-205ENST00000496549 FAM177BA6PVY3 158 aa9.91□□□□□ -0.82
CRNKL1-205ENST00000496549 SSR1P43307 286 aaKnown RBP9.91□□□□□ -0.82
CRNKL1-205ENST00000496549 PDE3AQ14432 1141 aa9.91□□□□□ -0.82
CRNKL1-205ENST00000496549 PIBF1Q8WXW3 757 aa9.91□□□□□ -0.82
CRNKL1-205ENST00000496549 TOMM22Q9NS69 142 aa9.91□□□□□ -0.82
CRNKL1-205ENST00000496549 SEC24BO95487 1268 aa9.91□□□□□ -0.82
CRNKL1-205ENST00000496549 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP9.91□□□□□ -0.82
CRNKL1-205ENST00000496549 USP47Q96K76 1375 aa9.91□□□□□ -0.82
CRNKL1-205ENST00000496549 SYNJ1O43426 1573 aa9.91□□□□□ -0.82
CRNKL1-205ENST00000496549 USP8P40818 1118 aa9.91□□□□□ -0.82
CRNKL1-205ENST00000496549 CCDC91Q7Z6B0 441 aa9.91□□□□□ -0.82
CRNKL1-205ENST00000496549 MPHOSPH9Q99550 1183 aa9.91□□□□□ -0.82
CRNKL1-205ENST00000496549 BAG4O95429 457 aaKnown RBP9.9□□□□□ -0.82
CRNKL1-205ENST00000496549 TNNT1P13805 278 aa9.9□□□□□ -0.82
CRNKL1-205ENST00000496549 RNF20Q5VTR2 975 aa9.9□□□□□ -0.82
CRNKL1-205ENST00000496549 SMC4Q9NTJ3 1288 aa9.9□□□□□ -0.82
CRNKL1-205ENST00000496549 LRSAM1Q6UWE0 723 aa9.9□□□□□ -0.82
CRNKL1-205ENST00000496549 EIF4G3O43432 1585 aaKnown RBP9.9□□□□□ -0.82
CRNKL1-205ENST00000496549 KNSTRNQ9Y448 316 aa9.9□□□□□ -0.83
CRNKL1-205ENST00000496549 IBTKQ9P2D0 1353 aaPredicted RBP9.9□□□□□ -0.83
CRNKL1-205ENST00000496549 SSFA2P28290 1259 aa9.89□□□□□ -0.83
CRNKL1-205ENST00000496549 SNAPC4Q5SXM2 1469 aa9.89□□□□□ -0.83
CRNKL1-205ENST00000496549 PLEKHH2Q8IVE3 1493 aa9.89□□□□□ -0.83
CRNKL1-205ENST00000496549 MYCNP04198 464 aaPredicted RBP9.89□□□□□ -0.83
CRNKL1-205ENST00000496549 PRIM1P49642 420 aaKnown RBP9.89□□□□□ -0.83
CRNKL1-205ENST00000496549 C10orf67Q8IYJ2 551 aa9.89□□□□□ -0.83
CRNKL1-205ENST00000496549 RBM28Q9NW13 759 aaKnown RBP9.89□□□□□ -0.83
CRNKL1-205ENST00000496549 SRPK2P78362 688 aaKnown RBP9.89□□□□□ -0.83
CRNKL1-205ENST00000496549 BMS1Q14692 1282 aaKnown RBP9.89□□□□□ -0.83
CRNKL1-205ENST00000496549 TPD52L1Q16890 204 aaPredicted RBP9.89□□□□□ -0.83
CRNKL1-205ENST00000496549 KDM2AQ9Y2K7 1162 aa9.89□□□□□ -0.83
CRNKL1-205ENST00000496549 ZRSR1Q15695 479 aaKnown RBP9.88□□□□□ -0.83
CRNKL1-205ENST00000496549 SMC5Q8IY18 1101 aa9.88□□□□□ -0.83
CRNKL1-205ENST00000496549 PLCD4Q9BRC7 762 aa9.88□□□□□ -0.83
CRNKL1-205ENST00000496549 RBSNQ9H1K0 784 aa9.88□□□□□ -0.83
CRNKL1-205ENST00000496549 ANKRD30AQ9BXX3 1397 aa9.88□□□□□ -0.83
CRNKL1-205ENST00000496549 BRMS1Q9HCU9 246 aa9.88□□□□□ -0.83
CRNKL1-205ENST00000496549 GAPVD1Q14C86 1478 aa9.88□□□□□ -0.83
CRNKL1-205ENST00000496549 ZBTB9Q96C00 473 aa9.87□□□□□ -0.83
CRNKL1-205ENST00000496549 TMX1Q9H3N1 280 aa9.87□□□□□ -0.83
CRNKL1-205ENST00000496549 CWC22Q9HCG8 908 aaKnown RBP9.87□□□□□ -0.83
CRNKL1-205ENST00000496549 ARAP1Q96P48 1450 aa9.87□□□□□ -0.83
CRNKL1-205ENST00000496549 GOLIM4O00461 696 aa9.87□□□□□ -0.83
CRNKL1-205ENST00000496549 RIOK3O14730 519 aaKnown RBP9.87□□□□□ -0.83
CRNKL1-205ENST00000496549 UVSSAQ2YD98 709 aa9.87□□□□□ -0.83
CRNKL1-205ENST00000496549 TTC31Q49AM3 519 aaPredicted RBP9.87□□□□□ -0.83
CRNKL1-205ENST00000496549 FOXD4L5Q5VV16 416 aaPredicted RBP9.87□□□□□ -0.83
CRNKL1-205ENST00000496549 ZNF397Q8NF99 534 aaPredicted RBP9.87□□□□□ -0.83
CRNKL1-205ENST00000496549 FOXD4L4Q8WXT5 416 aaPredicted RBP9.87□□□□□ -0.83
CRNKL1-205ENST00000496549 SNX21Q969T3 373 aa9.87□□□□□ -0.83
CRNKL1-205ENST00000496549 A0A1B0GUL7 405 aa9.87□□□□□ -0.83
CRNKL1-205ENST00000496549 PAXBP1Q9Y5B6 917 aa9.87□□□□□ -0.83
CRNKL1-205ENST00000496549 HSP90AB3PQ58FF7 597 aa9.86□□□□□ -0.83
CRNKL1-205ENST00000496549 LOC102724159A0A0B4J2E5 919 aa9.86□□□□□ -0.83
CRNKL1-205ENST00000496549 PWP2Q15269 919 aaKnown RBP9.86□□□□□ -0.83
CRNKL1-205ENST00000496549 TERF2Q15554 542 aa9.86□□□□□ -0.83
CRNKL1-205ENST00000496549 SAMD1Q6SPF0 538 aaPredicted RBP9.86□□□□□ -0.83
CRNKL1-205ENST00000496549 TARBP1Q13395 1621 aaKnown RBP9.85□□□□□ -0.83
CRNKL1-205ENST00000496549 FOXD1Q16676 465 aa9.85□□□□□ -0.83
CRNKL1-205ENST00000496549 ICE2Q659A1 982 aa9.85□□□□□ -0.83
CRNKL1-205ENST00000496549 PANK1Q8TE04 598 aa9.85□□□□□ -0.83
CRNKL1-205ENST00000496549 NCAPGQ9BPX3 1015 aa9.85□□□□□ -0.83
CRNKL1-205ENST00000496549 USP25Q9UHP3 1055 aa9.85□□□□□ -0.83
CRNKL1-205ENST00000496549 CHRM1P11229 460 aaPredicted RBP9.84□□□□□ -0.83
CRNKL1-205ENST00000496549 RDXP35241 583 aaKnown RBP9.84□□□□□ -0.83
CRNKL1-205ENST00000496549 CCDC191Q8NCU4 936 aa9.84□□□□□ -0.83
CRNKL1-205ENST00000496549 GIMAP7Q8NHV1 300 aa9.84□□□□□ -0.83
CRNKL1-205ENST00000496549 TTC12Q9H892 705 aaPredicted RBP9.84□□□□□ -0.83
CRNKL1-205ENST00000496549 IGHDP01880 384 aa9.84□□□□□ -0.83
CRNKL1-205ENST00000496549 MIA2Q96PC5 1412 aa9.84□□□□□ -0.83
CRNKL1-205ENST00000496549 GOLGA6L4A6NEF3 574 aa9.84□□□□□ -0.83
CRNKL1-205ENST00000496549 SPC24Q8NBT2 197 aa9.84□□□□□ -0.83
CRNKL1-205ENST00000496549 DRC1Q96MC2 740 aa9.84□□□□□ -0.83
CRNKL1-205ENST00000496549 CEP83Q9Y592 693 aa9.84□□□□□ -0.83
CRNKL1-205ENST00000496549 SMTNL1A8MU46 457 aa9.83□□□□□ -0.84
CRNKL1-205ENST00000496549 TRHP20396 242 aaPredicted RBP9.83□□□□□ -0.84
CRNKL1-205ENST00000496549 LRRC9Q6ZRR7 1453 aa9.83□□□□□ -0.84
CRNKL1-205ENST00000496549 ADCY5O95622 1261 aa9.83□□□□□ -0.84
CRNKL1-205ENST00000496549 CASQ1P31415 396 aa9.83□□□□□ -0.84
CRNKL1-205ENST00000496549 RABEP1Q15276 862 aa9.83□□□□□ -0.84
CRNKL1-205ENST00000496549 NGEFQ8N5V2 710 aa9.83□□□□□ -0.84
CRNKL1-205ENST00000496549 PDLIM2Q96JY6 352 aa9.83□□□□□ -0.84
CRNKL1-205ENST00000496549 RNF216Q9NWF9 866 aaPredicted RBP9.83□□□□□ -0.84
CRNKL1-205ENST00000496549 KIF27Q86VH2 1401 aa9.83□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms