RNA–Protein interactions for RNA: ENST00000496296.5

FGFR1-223, Transcript of fibroblast growth factor receptor 1, humanhuman

TSL 1 (best)

Gene FGFR1, Length 1,898 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FGFR1-223ENST00000496296 MYOM1P52179 1685 aa28.64■■■□□ 2.18
FGFR1-223ENST00000496296 SAFB2Q14151 953 aaKnown RBP eCLIP28.63■■■□□ 2.17
FGFR1-223ENST00000496296 METP08581 1390 aa28.63■■■□□ 2.17
FGFR1-223ENST00000496296 FAM9BQ8IZU0 186 aa28.62■■■□□ 2.17
FGFR1-223ENST00000496296 KNSTRNQ9Y448 316 aa28.62■■■□□ 2.17
FGFR1-223ENST00000496296 BRD4O60885 1362 aaPredicted RBP28.61■■■□□ 2.17
FGFR1-223ENST00000496296 ADAMTS13Q76LX8 1427 aa28.6■■■□□ 2.17
FGFR1-223ENST00000496296 TULP4Q9NRJ4 1543 aa28.59■■■□□ 2.17
FGFR1-223ENST00000496296 PARD3Q8TEW0 1356 aa28.58■■■□□ 2.17
FGFR1-223ENST00000496296 MYBBP1AQ9BQG0 1328 aaKnown RBP28.58■■■□□ 2.17
FGFR1-223ENST00000496296 ZNF142P52746 1687 aaPredicted RBP28.57■■■□□ 2.16
FGFR1-223ENST00000496296 SIRT1Q96EB6 747 aa28.57■■■□□ 2.16
FGFR1-223ENST00000496296 MINK1Q8N4C8 1332 aaPredicted RBP28.56■■■□□ 2.16
FGFR1-223ENST00000496296 TECPR2O15040 1411 aa28.55■■■□□ 2.16
FGFR1-223ENST00000496296 TMC1Q8TDI8 760 aa28.55■■■□□ 2.16
FGFR1-223ENST00000496296 PNISRQ8TF01 805 aaKnown RBP28.55■■■□□ 2.16
FGFR1-223ENST00000496296 KNDC1Q76NI1 1749 aa28.54■■■□□ 2.16
FGFR1-223ENST00000496296 SRPK2P78362 688 aaKnown RBP28.53■■■□□ 2.16
FGFR1-223ENST00000496296 MED14O60244 1454 aa28.53■■■□□ 2.16
FGFR1-223ENST00000496296 FAM135BQ49AJ0 1406 aa28.53■■■□□ 2.16
FGFR1-223ENST00000496296 CC2D1BQ5T0F9 858 aaKnown RBP28.53■■■□□ 2.16
FGFR1-223ENST00000496296 TBX22Q9Y458 520 aa28.52■■■□□ 2.16
FGFR1-223ENST00000496296 WAPLQ7Z5K2 1190 aa28.51■■■□□ 2.15
FGFR1-223ENST00000496296 DIP2AQ14689 1571 aa28.51■■■□□ 2.15
FGFR1-223ENST00000496296 ERICH6BQ5W0A0 696 aa28.51■■■□□ 2.15
FGFR1-223ENST00000496296 SLC26A8Q96RN1 970 aa28.51■■■□□ 2.15
FGFR1-223ENST00000496296 CABP2Q9NPB3 220 aa28.51■■■□□ 2.15
FGFR1-223ENST00000496296 CPS1P31327 1500 aa28.5■■■□□ 2.15
FGFR1-223ENST00000496296 ANKLE2Q86XL3 938 aa28.5■■■□□ 2.15
FGFR1-223ENST00000496296 ATAD2Q6PL18 1390 aa28.49■■■□□ 2.15
FGFR1-223ENST00000496296 NINLQ9Y2I6 1382 aa28.49■■■□□ 2.15
FGFR1-223ENST00000496296 NPC1L1Q9UHC9 1359 aa28.48■■■□□ 2.15
FGFR1-223ENST00000496296 SLC12A5Q9H2X9 1139 aa28.48■■■□□ 2.15
FGFR1-223ENST00000496296 PLEKHH1Q9ULM0 1364 aa28.48■■■□□ 2.15
FGFR1-223ENST00000496296 AMER1Q5JTC6 1135 aaPredicted RBP28.46■■■□□ 2.15
FGFR1-223ENST00000496296 SMG6Q86US8 1419 aaKnown RBP28.46■■■□□ 2.15
FGFR1-223ENST00000496296 CDK19Q9BWU1 502 aa28.46■■■□□ 2.15
FGFR1-223ENST00000496296 INSRP06213 1382 aa28.45■■■□□ 2.14
FGFR1-223ENST00000496296 NLRP13Q86W25 1043 aa28.44■■■□□ 2.14
FGFR1-223ENST00000496296 CARD14Q9BXL6 1004 aa28.42■■■□□ 2.14
FGFR1-223ENST00000496296 ANKRD36BQ8N2N9 1353 aa28.42■■■□□ 2.14
FGFR1-223ENST00000496296 ROBO2Q9HCK4 1378 aa28.41■■■□□ 2.14
FGFR1-223ENST00000496296 AMOTL2Q9Y2J4 779 aa28.4■■■□□ 2.14
FGFR1-223ENST00000496296 STRCQ7RTU9 1775 aa28.39■■■□□ 2.14
FGFR1-223ENST00000496296 PIK3R4Q99570 1358 aa28.39■■■□□ 2.13
FGFR1-223ENST00000496296 PTPRUQ92729 1446 aa28.38■■■□□ 2.13
FGFR1-223ENST00000496296 NSD3Q9BZ95 1437 aa28.38■■■□□ 2.13
FGFR1-223ENST00000496296 WASLO00401 505 aaPredicted RBP28.38■■■□□ 2.13
FGFR1-223ENST00000496296 TERF2IPQ9NYB0 399 aa28.36■■■□□ 2.13
FGFR1-223ENST00000496296 PTCH1Q13635 1447 aa28.35■■■□□ 2.13
FGFR1-223ENST00000496296 NCKAP5LQ9HCH0 1330 aa28.34■■■□□ 2.13
FGFR1-223ENST00000496296 CGNL1Q0VF96 1302 aa28.33■■■□□ 2.13
FGFR1-223ENST00000496296 USP32Q8NFA0 1604 aa28.33■■■□□ 2.13
FGFR1-223ENST00000496296 HDGFL2Q7Z4V5 671 aaPredicted RBP28.32■■■□□ 2.12
FGFR1-223ENST00000496296 NUDCQ9Y266 331 aa28.31■■■□□ 2.12
FGFR1-223ENST00000496296 DMRT2Q9Y5R5 561 aa28.31■■■□□ 2.12
FGFR1-223ENST00000496296 A0A1W2PP64 1363 aa28.3■■■□□ 2.12
FGFR1-223ENST00000496296 PPP2R1AP30153 589 aa28.29■■■□□ 2.12
FGFR1-223ENST00000496296 CABP1Q9NZU7 370 aa28.29■■■□□ 2.12
FGFR1-223ENST00000496296 ADGRB2O60241 1585 aa28.29■■■□□ 2.12
FGFR1-223ENST00000496296 TSHZ2Q9NRE2 1034 aa28.29■■■□□ 2.12
FGFR1-223ENST00000496296 NPHP4O75161 1426 aaPredicted RBP28.29■■■□□ 2.12
FGFR1-223ENST00000496296 XRN1Q8IZH2 1706 aaKnown RBP28.28■■■□□ 2.12
FGFR1-223ENST00000496296 RNF123Q5XPI4 1314 aa28.27■■■□□ 2.12
FGFR1-223ENST00000496296 NSD2O96028 1365 aa28.27■■■□□ 2.12
FGFR1-223ENST00000496296 ATP7BP35670 1465 aa28.26■■■□□ 2.11
FGFR1-223ENST00000496296 BLMP54132 1417 aaPredicted RBP28.26■■■□□ 2.11
FGFR1-223ENST00000496296 SIPA1L2Q9P2F8 1722 aaPredicted RBP28.25■■■□□ 2.11
FGFR1-223ENST00000496296 NUDT16Q96DE0 195 aaKnown RBP28.25■■■□□ 2.11
FGFR1-223ENST00000496296 MORC1Q86VD1 984 aa28.24■■■□□ 2.11
FGFR1-223ENST00000496296 CD163L1Q9NR16 1453 aa28.24■■■□□ 2.11
FGFR1-223ENST00000496296 CCDC61Q9Y6R9 512 aa28.23■■■□□ 2.11
FGFR1-223ENST00000496296 KCNA6P17658 529 aa28.23■■■□□ 2.11
FGFR1-223ENST00000496296 PPIP5K1Q6PFW1 1433 aa28.22■■■□□ 2.11
FGFR1-223ENST00000496296 PPP4R2Q9NY27 417 aa28.2■■■□□ 2.1
FGFR1-223ENST00000496296 CHD2O14647 1828 aaKnown RBP28.19■■■□□ 2.1
FGFR1-223ENST00000496296 PDE3BQ13370 1112 aa28.16■■■□□ 2.1
FGFR1-223ENST00000496296 CPSF1Q10570 1443 aaKnown RBP28.14■■■□□ 2.1
FGFR1-223ENST00000496296 PRR36Q9H6K5 1346 aa28.14■■■□□ 2.09
FGFR1-223ENST00000496296 CDC42BPGQ6DT37 1551 aa28.13■■■□□ 2.09
FGFR1-223ENST00000496296 IRX6P78412 446 aaPredicted RBP28.12■■■□□ 2.09
FGFR1-223ENST00000496296 ZNF692Q9BU19 519 aaPredicted RBP28.12■■■□□ 2.09
FGFR1-223ENST00000496296 MYT1Q01538 1121 aa28.12■■■□□ 2.09
FGFR1-223ENST00000496296 FYB1O15117 783 aa28.1■■■□□ 2.09
FGFR1-223ENST00000496296 WDR43Q15061 677 aaKnown RBP eCLIP28.1■■■□□ 2.09
FGFR1-223ENST00000496296 TNNT2P45379 298 aaPredicted RBP28.1■■■□□ 2.09
FGFR1-223ENST00000496296 EDC4Q6P2E9 1401 aaKnown RBP28.1■■■□□ 2.09
FGFR1-223ENST00000496296 GGNBP2Q9H3C7 697 aa28.08■■■□□ 2.09
FGFR1-223ENST00000496296 PLEKHG3A1L390 1219 aa28.08■■■□□ 2.09
FGFR1-223ENST00000496296 TOPAZ1Q8N9V7 1692 aa28.08■■■□□ 2.08
FGFR1-223ENST00000496296 ITSN1Q15811 1721 aa28.07■■■□□ 2.08
FGFR1-223ENST00000496296 NUTM2FA1L443 756 aa28.07■■■□□ 2.08
FGFR1-223ENST00000496296 ANKRD26Q9UPS8 1709 aa28.06■■■□□ 2.08
FGFR1-223ENST00000496296 POLR3AO14802 1390 aaPredicted RBP28.06■■■□□ 2.08
FGFR1-223ENST00000496296 KIF20BQ96Q89 1820 aa28.06■■■□□ 2.08
FGFR1-223ENST00000496296 SUGP2Q8IX01 1082 aaKnown RBP eCLIP28.06■■■□□ 2.08
FGFR1-223ENST00000496296 ANKARQ7Z5J8 1434 aa28.05■■■□□ 2.08
FGFR1-223ENST00000496296 ZNF335Q9H4Z2 1342 aaPredicted RBP28.05■■■□□ 2.08
FGFR1-223ENST00000496296 AKAP12Q02952 1782 aa28.04■■■□□ 2.08
FGFR1-223ENST00000496296 NWD1Q149M9 1564 aa28.04■■■□□ 2.08
Retrieved 100 of 20,778 RNA–protein pairs in 111.1 ms