RNA–Protein interactions for RNA: ENST00000496205.1

CLK1-214, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 480 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-214ENST00000496205 CTC1Q2NKJ3 1217 aa9.74□□□□□ -0.85
CLK1-214ENST00000496205 SMPD1P17405 629 aa9.73□□□□□ -0.85
CLK1-214ENST00000496205 WNT7AO00755 349 aa9.72□□□□□ -0.85
CLK1-214ENST00000496205 GPIHBP1Q8IV16 184 aa9.72□□□□□ -0.85
CLK1-214ENST00000496205 CD46P15529 392 aa9.71□□□□□ -0.86
CLK1-214ENST00000496205 MMP16P51512 607 aa9.71□□□□□ -0.86
CLK1-214ENST00000496205 TRIM32Q13049 653 aa9.71□□□□□ -0.86
CLK1-214ENST00000496205 GRIPAP1Q4V328 841 aa9.71□□□□□ -0.86
CLK1-214ENST00000496205 J3QL48 77 aa9.7□□□□□ -0.86
CLK1-214ENST00000496205 WFS1O76024 890 aa9.7□□□□□ -0.86
CLK1-214ENST00000496205 SNIP1Q8TAD8 396 aaKnown RBP9.7□□□□□ -0.86
CLK1-214ENST00000496205 PLCB2Q00722 1185 aa9.69□□□□□ -0.86
CLK1-214ENST00000496205 NFX1Q12986 1120 aaKnown RBP9.69□□□□□ -0.86
CLK1-214ENST00000496205 HLA-CQ95604 372 aa9.69□□□□□ -0.86
CLK1-214ENST00000496205 MRGPRX2Q96LB1 330 aa9.69□□□□□ -0.86
CLK1-214ENST00000496205 Q3C1V9 767 aa9.68□□□□□ -0.86
CLK1-214ENST00000496205 DXOO77932 396 aaKnown RBP9.67□□□□□ -0.86
CLK1-214ENST00000496205 USB1Q9BQ65 265 aaKnown RBP9.67□□□□□ -0.86
CLK1-214ENST00000496205 ATP13A2Q9NQ11 1180 aa9.67□□□□□ -0.86
CLK1-214ENST00000496205 KDM4AO75164 1064 aa9.66□□□□□ -0.86
CLK1-214ENST00000496205 SNRPBP14678 240 aaKnown RBP9.66□□□□□ -0.86
CLK1-214ENST00000496205 LCE2CQ5TA81 110 aa9.66□□□□□ -0.86
CLK1-214ENST00000496205 HPS1Q92902 700 aa9.65□□□□□ -0.86
CLK1-214ENST00000496205 SKOR1P84550 965 aa9.64□□□□□ -0.87
CLK1-214ENST00000496205 MAP2K5Q13163 448 aa9.64□□□□□ -0.87
CLK1-214ENST00000496205 MDM2Q00987 491 aaPredicted RBP9.63□□□□□ -0.87
CLK1-214ENST00000496205 IRF6O14896 467 aa9.62□□□□□ -0.87
CLK1-214ENST00000496205 GUCA2AQ02747 115 aa9.62□□□□□ -0.87
CLK1-214ENST00000496205 RC3H1Q5TC82 1133 aaKnown RBP9.62□□□□□ -0.87
CLK1-214ENST00000496205 CCDC24Q8N4L8 307 aa9.62□□□□□ -0.87
CLK1-214ENST00000496205 KDM2AQ9Y2K7 1162 aa9.61□□□□□ -0.87
CLK1-214ENST00000496205 HOXA2O43364 376 aa9.6□□□□□ -0.87
CLK1-214ENST00000496205 WIPF1O43516 503 aa9.6□□□□□ -0.87
CLK1-214ENST00000496205 SYMPKQ92797 1274 aaKnown RBP9.6□□□□□ -0.87
CLK1-214ENST00000496205 TRIM47Q96LD4 638 aa9.6□□□□□ -0.87
CLK1-214ENST00000496205 USP46P62068 366 aa9.58□□□□□ -0.88
CLK1-214ENST00000496205 REPIN1Q9BWE0 567 aaKnown RBP9.58□□□□□ -0.88
CLK1-214ENST00000496205 TERTO14746 1132 aaKnown RBP9.57□□□□□ -0.88
CLK1-214ENST00000496205 WNT7BP56706 349 aa9.56□□□□□ -0.88
CLK1-214ENST00000496205 PTCRAQ6ISU1 281 aaPredicted RBP9.56□□□□□ -0.88
CLK1-214ENST00000496205 SENP2Q9HC62 589 aa9.56□□□□□ -0.88
CLK1-214ENST00000496205 JUNDP17535 347 aa9.55□□□□□ -0.88
CLK1-214ENST00000496205 MINK1Q8N4C8 1332 aaPredicted RBP9.55□□□□□ -0.88
CLK1-214ENST00000496205 SIAH2O43255 324 aa9.54□□□□□ -0.88
CLK1-214ENST00000496205 SLC24A1O60721 1099 aa9.54□□□□□ -0.88
CLK1-214ENST00000496205 ALDH1A1P00352 501 aa9.54□□□□□ -0.88
CLK1-214ENST00000496205 CCDC102AQ96A19 550 aa9.54□□□□□ -0.88
CLK1-214ENST00000496205 STK17AQ9UEE5 414 aa9.54□□□□□ -0.88
CLK1-214ENST00000496205 HAP1P54257 671 aaPredicted RBP9.53□□□□□ -0.88
CLK1-214ENST00000496205 FAM217BQ9NTX9 383 aaPredicted RBP9.53□□□□□ -0.88
CLK1-214ENST00000496205 INSM1Q01101 510 aaPredicted RBP9.52□□□□□ -0.89
CLK1-214ENST00000496205 GPCPD1Q9NPB8 672 aa9.51□□□□□ -0.89
CLK1-214ENST00000496205 PCDHGC3Q9UN70 934 aa9.51□□□□□ -0.89
CLK1-214ENST00000496205 RETREG3Q86VR2 466 aa9.5□□□□□ -0.89
CLK1-214ENST00000496205 KIFC2Q96AC6 838 aa9.5□□□□□ -0.89
CLK1-214ENST00000496205 NUDT12Q9BQG2 462 aa9.5□□□□□ -0.89
CLK1-214ENST00000496205 CLCN1P35523 988 aa9.49□□□□□ -0.89
CLK1-214ENST00000496205 TRIM46Q7Z4K8 759 aa9.49□□□□□ -0.89
CLK1-214ENST00000496205 BMP1P13497 986 aa9.48□□□□□ -0.89
CLK1-214ENST00000496205 FDX1P10109 184 aa9.47□□□□□ -0.89
CLK1-214ENST00000496205 SH3BP2P78314 561 aa9.47□□□□□ -0.89
CLK1-214ENST00000496205 NUTM1Q86Y26 1132 aa9.47□□□□□ -0.89
CLK1-214ENST00000496205 EHBP1Q8NDI1 1231 aa9.47□□□□□ -0.89
CLK1-214ENST00000496205 CAPN5O15484 640 aaPredicted RBP9.45□□□□□ -0.9
CLK1-214ENST00000496205 C6orf229H3BNL8 230 aa9.44□□□□□ -0.9
CLK1-214ENST00000496205 NXF1Q9UBU9 619 aaKnown RBP9.44□□□□□ -0.9
CLK1-214ENST00000496205 WASF2Q9Y6W5 498 aa9.44□□□□□ -0.9
CLK1-214ENST00000496205 CCNYL3P0C7X3 344 aa9.43□□□□□ -0.9
CLK1-214ENST00000496205 MS4A1P11836 297 aa9.43□□□□□ -0.9
CLK1-214ENST00000496205 NDUFV2P19404 249 aa9.43□□□□□ -0.9
CLK1-214ENST00000496205 SPIRE2Q8WWL2 714 aa9.43□□□□□ -0.9
CLK1-214ENST00000496205 TULP1O00294 542 aaPredicted RBP9.42□□□□□ -0.9
CLK1-214ENST00000496205 VEGFBP49765 207 aa9.42□□□□□ -0.9
CLK1-214ENST00000496205 KRI1Q8N9T8 703 aaKnown RBP9.42□□□□□ -0.9
CLK1-214ENST00000496205 LORP23490 312 aaPredicted RBP9.41□□□□□ -0.9
CLK1-214ENST00000496205 SSTR3P32745 418 aaPredicted RBP9.41□□□□□ -0.9
CLK1-214ENST00000496205 GMPRP36959 345 aa9.41□□□□□ -0.9
CLK1-214ENST00000496205 LINC01559Q495D7 138 aa9.41□□□□□ -0.9
CLK1-214ENST00000496205 BAP1Q92560 729 aa9.41□□□□□ -0.9
CLK1-214ENST00000496205 UNC93B1Q9H1C4 597 aa9.41□□□□□ -0.9
CLK1-214ENST00000496205 EVA1BQ9NVM1 165 aa9.41□□□□□ -0.9
CLK1-214ENST00000496205 MOXD2PA6NHM9 499 aa9.4□□□□□ -0.9
CLK1-214ENST00000496205 SLC16A10Q8TF71 515 aa9.4□□□□□ -0.9
CLK1-214ENST00000496205 TLL2Q9Y6L7 1015 aa9.4□□□□□ -0.9
CLK1-214ENST00000496205 PTPRNQ16849 979 aa9.39□□□□□ -0.91
CLK1-214ENST00000496205 PRR7Q8TB68 274 aa9.38□□□□□ -0.91
CLK1-214ENST00000496205 ZFP42Q96MM3 310 aa9.38□□□□□ -0.91
CLK1-214ENST00000496205 KCNH2Q12809 1159 aa9.37□□□□□ -0.91
CLK1-214ENST00000496205 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.37□□□□□ -0.91
CLK1-214ENST00000496205 ERBB4Q15303 1308 aa9.36□□□□□ -0.91
CLK1-214ENST00000496205 H3BM21 787 aa9.36□□□□□ -0.91
CLK1-214ENST00000496205 NPAS3Q8IXF0 933 aa9.36□□□□□ -0.91
CLK1-214ENST00000496205 ZNF511Q8NB15 262 aa9.36□□□□□ -0.91
CLK1-214ENST00000496205 IRF7Q92985 503 aa9.35□□□□□ -0.91
CLK1-214ENST00000496205 NNTQ13423 1086 aa9.34□□□□□ -0.91
CLK1-214ENST00000496205 VARSP26640 1264 aaKnown RBP9.33□□□□□ -0.92
CLK1-214ENST00000496205 MTMR2Q13614 643 aa9.33□□□□□ -0.92
CLK1-214ENST00000496205 MPNDQ8N594 471 aa9.33□□□□□ -0.92
CLK1-214ENST00000496205 ZSCAN1Q8NBB4 408 aa9.33□□□□□ -0.92
CLK1-214ENST00000496205 DESI1Q6ICB0 168 aa9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 77.1 ms