RNA–Protein interactions for RNA: ENST00000495705.5

LMO4-204, Transcript of LIM domain only 4, humanhuman

TSL 3

Gene LMO4, Length 565 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO4-204ENST00000495705 CDC42BPGQ6DT37 1551 aa28.66■■■□□ 2.18
LMO4-204ENST00000495705 NBPF8Q3BBV2 869 aa28.65■■■□□ 2.18
LMO4-204ENST00000495705 ROCK2O75116 1388 aaKnown RBP28.64■■■□□ 2.18
LMO4-204ENST00000495705 PIP4K2BP78356 416 aa28.64■■■□□ 2.18
LMO4-204ENST00000495705 PRAM1Q96QH2 718 aa28.64■■■□□ 2.18
LMO4-204ENST00000495705 RALGAPBQ86X10 1494 aa28.64■■■□□ 2.17
LMO4-204ENST00000495705 SCAF1Q9H7N4 1312 aaKnown RBP28.64■■■□□ 2.17
LMO4-204ENST00000495705 POGKQ9P215 609 aa28.63■■■□□ 2.17
LMO4-204ENST00000495705 SLAIN2Q9P270 581 aa28.61■■■□□ 2.17
LMO4-204ENST00000495705 GPRASP1Q5JY77 1395 aa28.61■■■□□ 2.17
LMO4-204ENST00000495705 ADGRB2O60241 1585 aa28.58■■■□□ 2.17
LMO4-204ENST00000495705 ROBO1Q9Y6N7 1651 aa28.58■■■□□ 2.17
LMO4-204ENST00000495705 MST1RQ04912 1400 aa28.58■■■□□ 2.17
LMO4-204ENST00000495705 SAFB2Q14151 953 aaKnown RBP eCLIP28.56■■■□□ 2.16
LMO4-204ENST00000495705 FMN2Q9NZ56 1722 aa28.55■■■□□ 2.16
LMO4-204ENST00000495705 EIF3AQ14152 1382 aaKnown RBP28.53■■■□□ 2.16
LMO4-204ENST00000495705 CARD11Q9BXL7 1154 aa28.51■■■□□ 2.15
LMO4-204ENST00000495705 C1orf167Q5SNV9 1468 aa28.51■■■□□ 2.15
LMO4-204ENST00000495705 CENPJQ9HC77 1338 aaPredicted RBP28.49■■■□□ 2.15
LMO4-204ENST00000495705 QRICH2Q9H0J4 1663 aa28.49■■■□□ 2.15
LMO4-204ENST00000495705 MINK1Q8N4C8 1332 aaPredicted RBP28.48■■■□□ 2.15
LMO4-204ENST00000495705 BRINP3Q76B58 766 aa28.45■■■□□ 2.14
LMO4-204ENST00000495705 HIRIP3Q9BW71 556 aaPredicted RBP28.44■■■□□ 2.14
LMO4-204ENST00000495705 AHDC1Q5TGY3 1603 aaPredicted RBP28.43■■■□□ 2.14
LMO4-204ENST00000495705 ANKARQ7Z5J8 1434 aa28.43■■■□□ 2.14
LMO4-204ENST00000495705 HSPA1LP34931 641 aa28.42■■■□□ 2.14
LMO4-204ENST00000495705 PHLPP1O60346 1717 aa28.41■■■□□ 2.14
LMO4-204ENST00000495705 NHSL1Q5SYE7 1610 aa28.41■■■□□ 2.14
LMO4-204ENST00000495705 WASLO00401 505 aaPredicted RBP28.41■■■□□ 2.14
LMO4-204ENST00000495705 TULP4Q9NRJ4 1543 aa28.41■■■□□ 2.14
LMO4-204ENST00000495705 NUTM2FA1L443 756 aa28.39■■■□□ 2.14
LMO4-204ENST00000495705 RGPD8O14715 1765 aaPredicted RBP28.39■■■□□ 2.13
LMO4-204ENST00000495705 KIF1AQ12756 1690 aa28.38■■■□□ 2.13
LMO4-204ENST00000495705 USP32Q8NFA0 1604 aa28.38■■■□□ 2.13
LMO4-204ENST00000495705 ORAI2Q96SN7 254 aa28.37■■■□□ 2.13
LMO4-204ENST00000495705 ESCO1Q5FWF5 840 aa28.36■■■□□ 2.13
LMO4-204ENST00000495705 SBNO2Q9Y2G9 1366 aa28.36■■■□□ 2.13
LMO4-204ENST00000495705 ITSN1Q15811 1721 aa28.35■■■□□ 2.13
LMO4-204ENST00000495705 COL16A1Q07092 1604 aaPredicted RBP28.35■■■□□ 2.13
LMO4-204ENST00000495705 CDK19Q9BWU1 502 aa28.32■■■□□ 2.12
LMO4-204ENST00000495705 USP47Q96K76 1375 aa28.32■■■□□ 2.12
LMO4-204ENST00000495705 ATP7BP35670 1465 aa28.32■■■□□ 2.12
LMO4-204ENST00000495705 EVC2Q86UK5 1308 aa28.29■■■□□ 2.12
LMO4-204ENST00000495705 PRR36Q9H6K5 1346 aa28.29■■■□□ 2.12
LMO4-204ENST00000495705 TOPAZ1Q8N9V7 1692 aa28.29■■■□□ 2.12
LMO4-204ENST00000495705 NPHP3Q7Z494 1330 aa28.28■■■□□ 2.12
LMO4-204ENST00000495705 PHF8Q9UPP1 1060 aa28.27■■■□□ 2.12
LMO4-204ENST00000495705 SRPK2P78362 688 aaKnown RBP28.26■■■□□ 2.11
LMO4-204ENST00000495705 NUDT16Q96DE0 195 aaKnown RBP28.26■■■□□ 2.11
LMO4-204ENST00000495705 ST20-MTHFSA0A0A6YYL1 179 aa28.25■■■□□ 2.11
LMO4-204ENST00000495705 SLC24A1O60721 1099 aa28.24■■■□□ 2.11
LMO4-204ENST00000495705 SOS2Q07890 1332 aaPredicted RBP28.23■■■□□ 2.11
LMO4-204ENST00000495705 DDX17Q92841 729 aaKnown RBP28.23■■■□□ 2.11
LMO4-204ENST00000495705 PXDNQ92626 1479 aa28.22■■■□□ 2.11
LMO4-204ENST00000495705 FOXO3O43524 673 aa28.22■■■□□ 2.11
LMO4-204ENST00000495705 JCADQ9P266 1359 aa28.22■■■□□ 2.11
LMO4-204ENST00000495705 CABP2Q9NPB3 220 aa28.21■■■□□ 2.11
LMO4-204ENST00000495705 CCDC61Q9Y6R9 512 aa28.21■■■□□ 2.11
LMO4-204ENST00000495705 SHPRHQ149N8 1683 aa28.21■■■□□ 2.11
LMO4-204ENST00000495705 LRRC59Q96AG4 307 aaKnown RBP28.2■■■□□ 2.1
LMO4-204ENST00000495705 PMFBP1Q8TBY8 1022 aa28.19■■■□□ 2.1
LMO4-204ENST00000495705 TESK2Q96S53 571 aa28.19■■■□□ 2.1
LMO4-204ENST00000495705 ATAD2Q6PL18 1390 aa28.17■■■□□ 2.1
LMO4-204ENST00000495705 PPIP5K1Q6PFW1 1433 aa28.17■■■□□ 2.1
LMO4-204ENST00000495705 PLEKHG3A1L390 1219 aa28.14■■■□□ 2.1
LMO4-204ENST00000495705 EIF4G2P78344 907 aaKnown RBP eCLIP28.14■■■□□ 2.1
LMO4-204ENST00000495705 NGDNQ8NEJ9 315 aaKnown RBP28.14■■■□□ 2.1
LMO4-204ENST00000495705 POLR3AO14802 1390 aaPredicted RBP28.13■■■□□ 2.09
LMO4-204ENST00000495705 XPCQ01831 940 aaPredicted RBP28.13■■■□□ 2.09
LMO4-204ENST00000495705 PSME1Q06323 249 aa28.13■■■□□ 2.09
LMO4-204ENST00000495705 KRT28Q7Z3Y7 464 aa28.13■■■□□ 2.09
LMO4-204ENST00000495705 PUS7Q96PZ0 661 aaKnown RBP28.13■■■□□ 2.09
LMO4-204ENST00000495705 TMF1P82094 1093 aa28.11■■■□□ 2.09
LMO4-204ENST00000495705 PNPLA6Q8IY17 1366 aa28.11■■■□□ 2.09
LMO4-204ENST00000495705 TRPM3Q9HCF6 1732 aaPredicted RBP28.1■■■□□ 2.09
LMO4-204ENST00000495705 SBNO1A3KN83 1393 aa28.1■■■□□ 2.09
LMO4-204ENST00000495705 ACEP12821 1306 aa28.09■■■□□ 2.09
LMO4-204ENST00000495705 SPATA31A6Q5VVP1 1343 aa28.09■■■□□ 2.09
LMO4-204ENST00000495705 TNS3Q68CZ2 1445 aa28.09■■■□□ 2.09
LMO4-204ENST00000495705 COL22A1Q8NFW1 1626 aaPredicted RBP28.08■■■□□ 2.09
LMO4-204ENST00000495705 CABP1Q9NZU7 370 aa28.08■■■□□ 2.09
LMO4-204ENST00000495705 SPATA31A3Q5VYP0 1347 aa28.07■■■□□ 2.08
LMO4-204ENST00000495705 DISP3Q9P2K9 1392 aa28.07■■■□□ 2.08
LMO4-204ENST00000495705 MED1Q15648 1581 aaPredicted RBP28.07■■■□□ 2.08
LMO4-204ENST00000495705 HSPA5P11021 654 aaKnown RBP28.06■■■□□ 2.08
LMO4-204ENST00000495705 CDCA8Q53HL2 280 aa28.05■■■□□ 2.08
LMO4-204ENST00000495705 AKAP12Q02952 1782 aa28.04■■■□□ 2.08
LMO4-204ENST00000495705 ALS2Q96Q42 1657 aa28.03■■■□□ 2.08
LMO4-204ENST00000495705 ARHGEF10O15013 1369 aa28.03■■■□□ 2.08
LMO4-204ENST00000495705 BRD4O60885 1362 aaPredicted RBP28.03■■■□□ 2.08
LMO4-204ENST00000495705 NINLQ9Y2I6 1382 aa28.03■■■□□ 2.08
LMO4-204ENST00000495705 USP6P35125 1406 aa28■■■□□ 2.07
LMO4-204ENST00000495705 TMC1Q8TDI8 760 aa27.98■■■□□ 2.07
LMO4-204ENST00000495705 ZNF692Q9BU19 519 aaPredicted RBP27.98■■■□□ 2.07
LMO4-204ENST00000495705 LRP6O75581 1613 aa27.98■■■□□ 2.07
LMO4-204ENST00000495705 CPSF1Q10570 1443 aaKnown RBP27.98■■■□□ 2.07
LMO4-204ENST00000495705 MON2Q7Z3U7 1717 aa27.98■■■□□ 2.07
LMO4-204ENST00000495705 PAK3O75914 559 aaPredicted RBP27.96■■■□□ 2.07
LMO4-204ENST00000495705 LMOD2Q6P5Q4 547 aa27.96■■■□□ 2.07
LMO4-204ENST00000495705 CD163L1Q9NR16 1453 aa27.94■■■□□ 2.06
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms