RNA–Protein interactions for RNA: ENST00000495619.1

NCKAP1-208, Transcript of NCK associated protein 1, humanhuman

TSL 3

Gene NCKAP1, Length 665 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKAP1-208ENST00000495619 SPDYE5A6NIY4 337 aa11.88□□□□□ -0.51
NCKAP1-208ENST00000495619 SPTLC1O15269 473 aa11.88□□□□□ -0.51
NCKAP1-208ENST00000495619 MYSM1Q5VVJ2 828 aa11.88□□□□□ -0.51
NCKAP1-208ENST00000495619 HLA-CQ95604 372 aa11.88□□□□□ -0.51
NCKAP1-208ENST00000495619 RGS20O76081 388 aa11.87□□□□□ -0.51
NCKAP1-208ENST00000495619 GUCA2AQ02747 115 aa11.87□□□□□ -0.51
NCKAP1-208ENST00000495619 RNF19BQ6ZMZ0 732 aa11.87□□□□□ -0.51
NCKAP1-208ENST00000495619 MSS51Q4VC12 460 aa11.86□□□□□ -0.51
NCKAP1-208ENST00000495619 S1PR4O95977 384 aa11.85□□□□□ -0.51
NCKAP1-208ENST00000495619 CLK2P49760 499 aaKnown RBP11.85□□□□□ -0.51
NCKAP1-208ENST00000495619 MTMR2Q13614 643 aa11.85□□□□□ -0.51
NCKAP1-208ENST00000495619 RETREG3Q86VR2 466 aa11.85□□□□□ -0.51
NCKAP1-208ENST00000495619 ZBTB3Q9H5J0 574 aa11.85□□□□□ -0.51
NCKAP1-208ENST00000495619 SKIV2LQ15477 1246 aaKnown RBP11.84□□□□□ -0.51
NCKAP1-208ENST00000495619 TUSC1Q2TAM9 212 aa11.84□□□□□ -0.51
NCKAP1-208ENST00000495619 SH3D19Q5HYK7 790 aa11.84□□□□□ -0.51
NCKAP1-208ENST00000495619 PRPF38BQ5VTL8 546 aaKnown RBP11.84□□□□□ -0.51
NCKAP1-208ENST00000495619 IL27Q8NEV9 243 aa11.84□□□□□ -0.51
NCKAP1-208ENST00000495619 POLR3EQ9NVU0 708 aa11.83□□□□□ -0.52
NCKAP1-208ENST00000495619 PCDHGC3Q9UN70 934 aa11.83□□□□□ -0.52
NCKAP1-208ENST00000495619 NUTM2BA6NNL0 878 aaPredicted RBP11.82□□□□□ -0.52
NCKAP1-208ENST00000495619 NUTM2EB1AL46 878 aaPredicted RBP11.82□□□□□ -0.52
NCKAP1-208ENST00000495619 CSPP1Q1MSJ5 1256 aa11.82□□□□□ -0.52
NCKAP1-208ENST00000495619 NUTM2DQ5VT03 806 aaPredicted RBP11.82□□□□□ -0.52
NCKAP1-208ENST00000495619 NUTM2AQ8IVF1 878 aaPredicted RBP11.82□□□□□ -0.52
NCKAP1-208ENST00000495619 FAM160A2Q8N612 972 aaPredicted RBP11.82□□□□□ -0.52
NCKAP1-208ENST00000495619 ANKLE1Q8NAG6 615 aa11.82□□□□□ -0.52
NCKAP1-208ENST00000495619 PLEKHG3A1L390 1219 aa11.8□□□□□ -0.52
NCKAP1-208ENST00000495619 RNF223E7ERA6 249 aa11.8□□□□□ -0.52
NCKAP1-208ENST00000495619 SYMPKQ92797 1274 aaKnown RBP11.8□□□□□ -0.52
NCKAP1-208ENST00000495619 GOPCQ9HD26 462 aa11.8□□□□□ -0.52
NCKAP1-208ENST00000495619 PCMTD1Q96MG8 357 aaPredicted RBP11.79□□□□□ -0.52
NCKAP1-208ENST00000495619 PCDHB15Q9Y5E8 787 aa11.79□□□□□ -0.52
NCKAP1-208ENST00000495619 LIMD1Q9UGP4 676 aa11.78□□□□□ -0.52
NCKAP1-208ENST00000495619 JUNDP17535 347 aa11.77□□□□□ -0.53
NCKAP1-208ENST00000495619 MMP16P51512 607 aa11.77□□□□□ -0.53
NCKAP1-208ENST00000495619 PRR7Q8TB68 274 aa11.77□□□□□ -0.53
NCKAP1-208ENST00000495619 HRCP23327 699 aa11.76□□□□□ -0.53
NCKAP1-208ENST00000495619 DXOO77932 396 aaKnown RBP11.75□□□□□ -0.53
NCKAP1-208ENST00000495619 DESI1Q6ICB0 168 aa11.75□□□□□ -0.53
NCKAP1-208ENST00000495619 PPEF1O14829 653 aaPredicted RBP11.74□□□□□ -0.53
NCKAP1-208ENST00000495619 ZBTB24O43167 697 aaPredicted RBP11.74□□□□□ -0.53
NCKAP1-208ENST00000495619 PRDM9Q9NQV7 894 aa11.74□□□□□ -0.53
NCKAP1-208ENST00000495619 FCF1Q9Y324 198 aaKnown RBP11.74□□□□□ -0.53
NCKAP1-208ENST00000495619 V9GY48 417 aaPredicted RBP11.74□□□□□ -0.53
NCKAP1-208ENST00000495619 LILRB3O75022 631 aa11.73□□□□□ -0.53
NCKAP1-208ENST00000495619 CABLES1Q8TDN4 633 aa11.73□□□□□ -0.53
NCKAP1-208ENST00000495619 HELBQ8NG08 1087 aaPredicted RBP11.72□□□□□ -0.53
NCKAP1-208ENST00000495619 TSC1Q92574 1164 aa11.72□□□□□ -0.53
NCKAP1-208ENST00000495619 PRKD2Q9BZL6 878 aa11.72□□□□□ -0.53
NCKAP1-208ENST00000495619 SLC19A1P41440 591 aa11.71□□□□□ -0.53
NCKAP1-208ENST00000495619 QPCTQ16769 361 aa11.71□□□□□ -0.53
NCKAP1-208ENST00000495619 CCDC24Q8N4L8 307 aa11.71□□□□□ -0.53
NCKAP1-208ENST00000495619 PROCA1Q8NCQ7 364 aaPredicted RBP11.7□□□□□ -0.54
NCKAP1-208ENST00000495619 CD2BP2O95400 341 aaKnown RBP11.69□□□□□ -0.54
NCKAP1-208ENST00000495619 PTPRNQ16849 979 aa11.69□□□□□ -0.54
NCKAP1-208ENST00000495619 NUDT12Q9BQG2 462 aa11.69□□□□□ -0.54
NCKAP1-208ENST00000495619 RPIAP49247 311 aa11.68□□□□□ -0.54
NCKAP1-208ENST00000495619 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.68□□□□□ -0.54
NCKAP1-208ENST00000495619 CFAP99D6REC4 459 aa11.67□□□□□ -0.54
NCKAP1-208ENST00000495619 CCNYL3P0C7X3 344 aa11.67□□□□□ -0.54
NCKAP1-208ENST00000495619 RTL5Q5HYW3 569 aaPredicted RBP11.66□□□□□ -0.54
NCKAP1-208ENST00000495619 PPP2R2DQ66LE6 453 aa11.66□□□□□ -0.54
NCKAP1-208ENST00000495619 LYPD8Q6UX82 237 aa11.65□□□□□ -0.54
NCKAP1-208ENST00000495619 CTHP32929 405 aa11.62□□□□□ -0.55
NCKAP1-208ENST00000495619 SPRYD7Q5W111 196 aa11.62□□□□□ -0.55
NCKAP1-208ENST00000495619 LIAT1Q6ZQX7 453 aa11.62□□□□□ -0.55
NCKAP1-208ENST00000495619 EVA1BQ9NVM1 165 aa11.62□□□□□ -0.55
NCKAP1-208ENST00000495619 TMEM259Q4ZIN3 620 aa11.61□□□□□ -0.55
NCKAP1-208ENST00000495619 PLA2G2CQ5R387 149 aa11.61□□□□□ -0.55
NCKAP1-208ENST00000495619 ZNF598Q86UK7 904 aaKnown RBP11.61□□□□□ -0.55
NCKAP1-208ENST00000495619 AP1G2O75843 785 aa11.6□□□□□ -0.55
NCKAP1-208ENST00000495619 KCNH2Q12809 1159 aa11.6□□□□□ -0.55
NCKAP1-208ENST00000495619 RFC5P40937 340 aa11.59□□□□□ -0.55
NCKAP1-208ENST00000495619 TRIM32Q13049 653 aa11.58□□□□□ -0.56
NCKAP1-208ENST00000495619 ZNF697Q5TEC3 545 aa11.58□□□□□ -0.56
NCKAP1-208ENST00000495619 ARMC2Q8NEN0 867 aa11.56□□□□□ -0.56
NCKAP1-208ENST00000495619 CTDSPL2Q05D32 466 aa11.55□□□□□ -0.56
NCKAP1-208ENST00000495619 PNMA1Q8ND90 353 aa11.55□□□□□ -0.56
NCKAP1-208ENST00000495619 IRX2Q9BZI1 471 aaPredicted RBP11.55□□□□□ -0.56
NCKAP1-208ENST00000495619 UNC93B1Q9H1C4 597 aa11.55□□□□□ -0.56
NCKAP1-208ENST00000495619 PER1O15534 1290 aaPredicted RBP11.54□□□□□ -0.56
NCKAP1-208ENST00000495619 WNT7BP56706 349 aa11.54□□□□□ -0.56
NCKAP1-208ENST00000495619 LAPTM4AQ15012 233 aa11.54□□□□□ -0.56
NCKAP1-208ENST00000495619 EMID1Q96A84 441 aaPredicted RBP11.54□□□□□ -0.56
NCKAP1-208ENST00000495619 TMEM132AQ24JP5 1023 aa11.53□□□□□ -0.56
NCKAP1-208ENST00000495619 PTCRAQ6ISU1 281 aaPredicted RBP11.53□□□□□ -0.56
NCKAP1-208ENST00000495619 F12P00748 615 aaPredicted RBP11.52□□□□□ -0.57
NCKAP1-208ENST00000495619 BANK1Q8NDB2 785 aa11.51□□□□□ -0.57
NCKAP1-208ENST00000495619 MAP10Q9P2G4 905 aa11.51□□□□□ -0.57
NCKAP1-208ENST00000495619 PDZRN3Q9UPQ7 1066 aa11.51□□□□□ -0.57
NCKAP1-208ENST00000495619 APBB1O00213 710 aa11.5□□□□□ -0.57
NCKAP1-208ENST00000495619 USP17L8P0C7I0 530 aa11.5□□□□□ -0.57
NCKAP1-208ENST00000495619 FOXC1Q12948 553 aa11.5□□□□□ -0.57
NCKAP1-208ENST00000495619 GFRA3O60609 400 aa11.49□□□□□ -0.57
NCKAP1-208ENST00000495619 NBPF14Q5TI25 921 aa11.49□□□□□ -0.57
NCKAP1-208ENST00000495619 FBXO31Q5XUX0 539 aaPredicted RBP11.48□□□□□ -0.57
NCKAP1-208ENST00000495619 LRRN4Q8WUT4 740 aa11.48□□□□□ -0.57
NCKAP1-208ENST00000495619 BAP1Q92560 729 aa11.48□□□□□ -0.57
NCKAP1-208ENST00000495619 WNT7AO00755 349 aa11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms