RNA–Protein interactions for RNA: ENST00000495535.1

REPIN1-215, Transcript of replication initiator 1, human

TSL 3

Gene REPIN1, Length 672 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
REPIN1-215	ENST00000495535	SCAF1	Q9H7N4	1312 aa	Known RBP	33.44	■■■□□ 2.94
REPIN1-215	ENST00000495535	NBPF1	Q3BBV0	1214 aa		33.43	■■■□□ 2.94
REPIN1-215	ENST00000495535	PRAM1	Q96QH2	718 aa		33.43	■■■□□ 2.94
REPIN1-215	ENST00000495535	ROCK2	O75116	1388 aa	Known RBP	33.42	■■■□□ 2.94
REPIN1-215	ENST00000495535	CDC42BPG	Q6DT37	1551 aa		33.41	■■■□□ 2.94
REPIN1-215	ENST00000495535	ARHGEF28	Q8N1W1	1705 aa	Known RBP	33.39	■■■□□ 2.94
REPIN1-215	ENST00000495535	NBPF8	Q3BBV2	869 aa		33.39	■■■□□ 2.94
REPIN1-215	ENST00000495535	GPRASP1	Q5JY77	1395 aa		33.38	■■■□□ 2.93
REPIN1-215	ENST00000495535	PLEKHH1	Q9ULM0	1364 aa		33.36	■■■□□ 2.93
REPIN1-215	ENST00000495535	RALGAPB	Q86X10	1494 aa		33.36	■■■□□ 2.93
REPIN1-215	ENST00000495535	MST1R	Q04912	1400 aa		33.35	■■■□□ 2.93
REPIN1-215	ENST00000495535	EIF3A	Q14152	1382 aa	Known RBP	33.34	■■■□□ 2.93
REPIN1-215	ENST00000495535	ROBO1	Q9Y6N7	1651 aa		33.33	■■■□□ 2.93
REPIN1-215	ENST00000495535	ADGRB2	O60241	1585 aa		33.32	■■■□□ 2.92
REPIN1-215	ENST00000495535	CARD11	Q9BXL7	1154 aa		33.28	■■■□□ 2.92
REPIN1-215	ENST00000495535	CENPJ	Q9HC77	1338 aa	Predicted RBP	33.28	■■■□□ 2.92
REPIN1-215	ENST00000495535	C1orf167	Q5SNV9	1468 aa		33.27	■■■□□ 2.92
REPIN1-215	ENST00000495535	SAFB2	Q14151	953 aa	Known RBP eCLIP	33.27	■■■□□ 2.92
REPIN1-215	ENST00000495535	FMN2	Q9NZ56	1722 aa		33.26	■■■□□ 2.92
REPIN1-215	ENST00000495535	BRINP3	Q76B58	766 aa		33.23	■■■□□ 2.91
REPIN1-215	ENST00000495535	MINK1	Q8N4C8	1332 aa	Predicted RBP	33.22	■■■□□ 2.91
REPIN1-215	ENST00000495535	SLC24A1	O60721	1099 aa		33.21	■■■□□ 2.91
REPIN1-215	ENST00000495535	ANKAR	Q7Z5J8	1434 aa		33.2	■■■□□ 2.91
REPIN1-215	ENST00000495535	WASL	O00401	505 aa	Predicted RBP	33.2	■■■□□ 2.91
REPIN1-215	ENST00000495535	HSPA1L	P34931	641 aa		33.2	■■■□□ 2.91
REPIN1-215	ENST00000495535	AHDC1	Q5TGY3	1603 aa	Predicted RBP	33.17	■■■□□ 2.9
REPIN1-215	ENST00000495535	QRICH2	Q9H0J4	1663 aa		33.17	■■■□□ 2.9
REPIN1-215	ENST00000495535	ESCO1	Q5FWF5	840 aa		33.15	■■■□□ 2.9
REPIN1-215	ENST00000495535	HIRIP3	Q9BW71	556 aa	Predicted RBP	33.15	■■■□□ 2.9
REPIN1-215	ENST00000495535	PHLPP1	O60346	1717 aa		33.14	■■■□□ 2.9
REPIN1-215	ENST00000495535	SBNO2	Q9Y2G9	1366 aa		33.14	■■■□□ 2.9
REPIN1-215	ENST00000495535	TULP4	Q9NRJ4	1543 aa		33.13	■■■□□ 2.89
REPIN1-215	ENST00000495535	KIF1A	Q12756	1690 aa		33.13	■■■□□ 2.89
REPIN1-215	ENST00000495535	NHSL1	Q5SYE7	1610 aa		33.13	■■■□□ 2.89
REPIN1-215	ENST00000495535	ORAI2	Q96SN7	254 aa		33.11	■■■□□ 2.89
REPIN1-215	ENST00000495535	NPHP3	Q7Z494	1330 aa		33.09	■■■□□ 2.89
REPIN1-215	ENST00000495535	EVC2	Q86UK5	1308 aa		33.09	■■■□□ 2.89
REPIN1-215	ENST00000495535	CDK19	Q9BWU1	502 aa		33.09	■■■□□ 2.89
REPIN1-215	ENST00000495535	NUTM2F	A1L443	756 aa		33.07	■■■□□ 2.88
REPIN1-215	ENST00000495535	ITSN1	Q15811	1721 aa		33.07	■■■□□ 2.88
REPIN1-215	ENST00000495535	RGPD8	O14715	1765 aa	Predicted RBP	33.06	■■■□□ 2.88
REPIN1-215	ENST00000495535	PHF8	Q9UPP1	1060 aa		33.05	■■■□□ 2.88
REPIN1-215	ENST00000495535	LRRC59	Q96AG4	307 aa	Known RBP	33.04	■■■□□ 2.88
REPIN1-215	ENST00000495535	COL16A1	Q07092	1604 aa	Predicted RBP	33.03	■■■□□ 2.88
REPIN1-215	ENST00000495535	USP32	Q8NFA0	1604 aa		33.03	■■■□□ 2.88
REPIN1-215	ENST00000495535	NUDT16	Q96DE0	195 aa	Known RBP	33.02	■■■□□ 2.88
REPIN1-215	ENST00000495535	CCDC61	Q9Y6R9	512 aa		33.02	■■■□□ 2.88
REPIN1-215	ENST00000495535	SRPK2	P78362	688 aa	Known RBP	33.01	■■■□□ 2.87
REPIN1-215	ENST00000495535	SOS2	Q07890	1332 aa	Predicted RBP	33.01	■■■□□ 2.87
REPIN1-215	ENST00000495535	JCAD	Q9P266	1359 aa		33	■■■□□ 2.87
REPIN1-215	ENST00000495535	USP47	Q96K76	1375 aa		32.99	■■■□□ 2.87
REPIN1-215	ENST00000495535	ATP7B	P35670	1465 aa		32.99	■■■□□ 2.87
REPIN1-215	ENST00000495535	PSME1	Q06323	249 aa		32.98	■■■□□ 2.87
REPIN1-215	ENST00000495535	PUS7	Q96PZ0	661 aa	Known RBP	32.98	■■■□□ 2.87
REPIN1-215	ENST00000495535	FOXO3	O43524	673 aa		32.97	■■■□□ 2.87
REPIN1-215	ENST00000495535	PRR36	Q9H6K5	1346 aa		32.97	■■■□□ 2.87
REPIN1-215	ENST00000495535	ST20-MTHFS	A0A0A6YYL1	179 aa		32.96	■■■□□ 2.87
REPIN1-215	ENST00000495535	PLEKHG3	A1L390	1219 aa		32.93	■■■□□ 2.86
REPIN1-215	ENST00000495535	ATAD2	Q6PL18	1390 aa		32.93	■■■□□ 2.86
REPIN1-215	ENST00000495535	SHPRH	Q149N8	1683 aa		32.92	■■■□□ 2.86
REPIN1-215	ENST00000495535	TOPAZ1	Q8N9V7	1692 aa		32.92	■■■□□ 2.86
REPIN1-215	ENST00000495535	CABP2	Q9NPB3	220 aa		32.91	■■■□□ 2.86
REPIN1-215	ENST00000495535	SPATA31A6	Q5VVP1	1343 aa		32.91	■■■□□ 2.86
REPIN1-215	ENST00000495535	KRT28	Q7Z3Y7	464 aa		32.9	■■■□□ 2.86
REPIN1-215	ENST00000495535	NGDN	Q8NEJ9	315 aa	Known RBP	32.9	■■■□□ 2.86
REPIN1-215	ENST00000495535	PXDN	Q92626	1479 aa		32.9	■■■□□ 2.86
REPIN1-215	ENST00000495535	PMFBP1	Q8TBY8	1022 aa		32.89	■■■□□ 2.86
REPIN1-215	ENST00000495535	DDX17	Q92841	729 aa	Known RBP	32.89	■■■□□ 2.86
REPIN1-215	ENST00000495535	TESK2	Q96S53	571 aa		32.89	■■■□□ 2.86
REPIN1-215	ENST00000495535	EIF4G2	P78344	907 aa	Known RBP eCLIP	32.88	■■■□□ 2.85
REPIN1-215	ENST00000495535	CDCA8	Q53HL2	280 aa		32.88	■■■□□ 2.85
REPIN1-215	ENST00000495535	SBNO1	A3KN83	1393 aa		32.87	■■■□□ 2.85
REPIN1-215	ENST00000495535	TMF1	P82094	1093 aa		32.87	■■■□□ 2.85
REPIN1-215	ENST00000495535	PPIP5K1	Q6PFW1	1433 aa		32.86	■■■□□ 2.85
REPIN1-215	ENST00000495535	POLR3A	O14802	1390 aa	Predicted RBP	32.86	■■■□□ 2.85
REPIN1-215	ENST00000495535	BRD4	O60885	1362 aa	Predicted RBP	32.84	■■■□□ 2.85
REPIN1-215	ENST00000495535	SPATA31A3	Q5VYP0	1347 aa		32.81	■■■□□ 2.84
REPIN1-215	ENST00000495535	ZNF692	Q9BU19	519 aa	Predicted RBP	32.81	■■■□□ 2.84
REPIN1-215	ENST00000495535	ACE	P12821	1306 aa		32.8	■■■□□ 2.84
REPIN1-215	ENST00000495535	PNPLA6	Q8IY17	1366 aa		32.8	■■■□□ 2.84
REPIN1-215	ENST00000495535	CABP1	Q9NZU7	370 aa		32.79	■■■□□ 2.84
REPIN1-215	ENST00000495535	ARHGEF10	O15013	1369 aa		32.79	■■■□□ 2.84
REPIN1-215	ENST00000495535	NINL	Q9Y2I6	1382 aa		32.79	■■■□□ 2.84
REPIN1-215	ENST00000495535	TNS3	Q68CZ2	1445 aa		32.77	■■■□□ 2.84
REPIN1-215	ENST00000495535	COL22A1	Q8NFW1	1626 aa	Predicted RBP	32.77	■■■□□ 2.84
REPIN1-215	ENST00000495535	XPC	Q01831	940 aa	Predicted RBP	32.77	■■■□□ 2.84
REPIN1-215	ENST00000495535	TRPM3	Q9HCF6	1732 aa	Predicted RBP	32.74	■■■□□ 2.83
REPIN1-215	ENST00000495535	MED1	Q15648	1581 aa	Predicted RBP	32.72	■■■□□ 2.83
REPIN1-215	ENST00000495535	HSPA5	P11021	654 aa	Known RBP	32.7	■■■□□ 2.83
REPIN1-215	ENST00000495535	TERF2IP	Q9NYB0	399 aa		32.68	■■■□□ 2.82
REPIN1-215	ENST00000495535	ALS2	Q96Q42	1657 aa		32.68	■■■□□ 2.82
REPIN1-215	ENST00000495535	PAK3	O75914	559 aa	Predicted RBP	32.67	■■■□□ 2.82
REPIN1-215	ENST00000495535	HDGFL2	Q7Z4V5	671 aa	Predicted RBP	32.67	■■■□□ 2.82
REPIN1-215	ENST00000495535	AKAP12	Q02952	1782 aa		32.67	■■■□□ 2.82
REPIN1-215	ENST00000495535	USP6	P35125	1406 aa		32.67	■■■□□ 2.82
REPIN1-215	ENST00000495535	TMC1	Q8TDI8	760 aa		32.66	■■■□□ 2.82
REPIN1-215	ENST00000495535	DISP3	Q9P2K9	1392 aa		32.66	■■■□□ 2.82
REPIN1-215	ENST00000495535	CPSF1	Q10570	1443 aa	Known RBP	32.66	■■■□□ 2.82
REPIN1-215	ENST00000495535	ZEB1	P37275	1124 aa	Predicted RBP	32.65	■■■□□ 2.82
REPIN1-215	ENST00000495535	LMOD2	Q6P5Q4	547 aa		32.65	■■■□□ 2.82

Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms