RNA–Protein interactions for RNA: ENST00000495293.5

RBM39-240, Transcript of RNA binding motif protein 39, humanhuman

TSL 2

Gene RBM39, Length 759 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-240ENST00000495293 HOXA2O43364 376 aa9.35□□□□□ -0.91
RBM39-240ENST00000495293 DGAT1O75907 488 aa9.35□□□□□ -0.91
RBM39-240ENST00000495293 RPIAP49247 311 aa9.35□□□□□ -0.91
RBM39-240ENST00000495293 MMP16P51512 607 aa9.34□□□□□ -0.91
RBM39-240ENST00000495293 LMOD2Q6P5Q4 547 aa9.34□□□□□ -0.91
RBM39-240ENST00000495293 GPCPD1Q9NPB8 672 aa9.34□□□□□ -0.91
RBM39-240ENST00000495293 SYMPKQ92797 1274 aaKnown RBP9.33□□□□□ -0.92
RBM39-240ENST00000495293 TOR4AQ9NXH8 423 aa9.33□□□□□ -0.92
RBM39-240ENST00000495293 CCDC180Q9P1Z9 1646 aa9.33□□□□□ -0.92
RBM39-240ENST00000495293 TULP1O00294 542 aaPredicted RBP9.32□□□□□ -0.92
RBM39-240ENST00000495293 DXOO77932 396 aaKnown RBP9.32□□□□□ -0.92
RBM39-240ENST00000495293 GRIPAP1Q4V328 841 aa9.31□□□□□ -0.92
RBM39-240ENST00000495293 USB1Q9BQ65 265 aaKnown RBP9.31□□□□□ -0.92
RBM39-240ENST00000495293 AAASQ9NRG9 546 aa9.31□□□□□ -0.92
RBM39-240ENST00000495293 DACH1Q9UI36 760 aa9.31□□□□□ -0.92
RBM39-240ENST00000495293 ZMYND10O75800 440 aa9.29□□□□□ -0.92
RBM39-240ENST00000495293 CLCN1P35523 988 aa9.29□□□□□ -0.92
RBM39-240ENST00000495293 Q3C1V9 767 aa9.29□□□□□ -0.92
RBM39-240ENST00000495293 PCDHGC3Q9UN70 934 aa9.29□□□□□ -0.92
RBM39-240ENST00000495293 TRIM32Q13049 653 aa9.28□□□□□ -0.92
RBM39-240ENST00000495293 LCE2AQ5TA79 106 aaPredicted RBP9.28□□□□□ -0.92
RBM39-240ENST00000495293 BARGINQ6ZT62 677 aa9.28□□□□□ -0.92
RBM39-240ENST00000495293 ZC3H15Q8WU90 426 aaKnown RBP9.28□□□□□ -0.92
RBM39-240ENST00000495293 CD2BP2O95400 341 aaKnown RBP9.27□□□□□ -0.93
RBM39-240ENST00000495293 USP46P62068 366 aa9.27□□□□□ -0.93
RBM39-240ENST00000495293 SKOR1P84550 965 aa9.26□□□□□ -0.93
RBM39-240ENST00000495293 AVPP01185 164 aa9.25□□□□□ -0.93
RBM39-240ENST00000495293 SSTR3P32745 418 aaPredicted RBP9.24□□□□□ -0.93
RBM39-240ENST00000495293 SPIRE2Q8WWL2 714 aa9.24□□□□□ -0.93
RBM39-240ENST00000495293 WNT7AO00755 349 aa9.23□□□□□ -0.93
RBM39-240ENST00000495293 ZBTB24O43167 697 aaPredicted RBP9.23□□□□□ -0.93
RBM39-240ENST00000495293 SMPD1P17405 629 aa9.23□□□□□ -0.93
RBM39-240ENST00000495293 NDUFV2P19404 249 aa9.23□□□□□ -0.93
RBM39-240ENST00000495293 PTCRAQ6ISU1 281 aaPredicted RBP9.23□□□□□ -0.93
RBM39-240ENST00000495293 TREML4Q6UXN2 200 aa9.23□□□□□ -0.93
RBM39-240ENST00000495293 CYP4X1Q8N118 509 aa9.23□□□□□ -0.93
RBM39-240ENST00000495293 CRIPAKQ8N1N5 446 aa9.23□□□□□ -0.93
RBM39-240ENST00000495293 MRGPRX2Q96LB1 330 aa9.23□□□□□ -0.93
RBM39-240ENST00000495293 J3QL48 77 aa9.22□□□□□ -0.93
RBM39-240ENST00000495293 JUNDP17535 347 aa9.22□□□□□ -0.93
RBM39-240ENST00000495293 AMHR2Q16671 573 aa9.22□□□□□ -0.93
RBM39-240ENST00000495293 CCDC24Q8N4L8 307 aa9.22□□□□□ -0.93
RBM39-240ENST00000495293 MOXD2PA6NHM9 499 aa9.21□□□□□ -0.94
RBM39-240ENST00000495293 FDX1P10109 184 aa9.21□□□□□ -0.94
RBM39-240ENST00000495293 GIGYF2Q6Y7W6 1299 aaKnown RBP9.21□□□□□ -0.94
RBM39-240ENST00000495293 KRI1Q8N9T8 703 aaKnown RBP9.21□□□□□ -0.94
RBM39-240ENST00000495293 RETREG3Q86VR2 466 aa9.2□□□□□ -0.94
RBM39-240ENST00000495293 NUTM1Q86Y26 1132 aa9.2□□□□□ -0.94
RBM39-240ENST00000495293 TTLL12Q14166 644 aaPredicted RBP9.19□□□□□ -0.94
RBM39-240ENST00000495293 PARP9Q8IXQ6 854 aa9.18□□□□□ -0.94
RBM39-240ENST00000495293 GMPR2Q9P2T1 348 aaKnown RBP9.18□□□□□ -0.94
RBM39-240ENST00000495293 TTC24A2A3L6 582 aaPredicted RBP9.17□□□□□ -0.94
RBM39-240ENST00000495293 MS4A1P11836 297 aa9.17□□□□□ -0.94
RBM39-240ENST00000495293 RC3H1Q5TC82 1133 aaKnown RBP9.17□□□□□ -0.94
RBM39-240ENST00000495293 C6orf229H3BNL8 230 aa9.16□□□□□ -0.94
RBM39-240ENST00000495293 SLC24A1O60721 1099 aa9.16□□□□□ -0.94
RBM39-240ENST00000495293 SMCPP49901 116 aaPredicted RBP9.16□□□□□ -0.94
RBM39-240ENST00000495293 SNIP1Q8TAD8 396 aaKnown RBP9.16□□□□□ -0.94
RBM39-240ENST00000495293 NUDT12Q9BQG2 462 aa9.16□□□□□ -0.94
RBM39-240ENST00000495293 AXIN1O15169 862 aa9.15□□□□□ -0.94
RBM39-240ENST00000495293 HPS1Q92902 700 aa9.15□□□□□ -0.94
RBM39-240ENST00000495293 BEGAINQ9BUH8 593 aa9.15□□□□□ -0.94
RBM39-240ENST00000495293 TRIM66O15016 1216 aa9.14□□□□□ -0.95
RBM39-240ENST00000495293 ABCC9O60706 1549 aa9.14□□□□□ -0.95
RBM39-240ENST00000495293 WNT7BP56706 349 aa9.13□□□□□ -0.95
RBM39-240ENST00000495293 CTC1Q2NKJ3 1217 aa9.13□□□□□ -0.95
RBM39-240ENST00000495293 PCDHB15Q9Y5E8 787 aa9.13□□□□□ -0.95
RBM39-240ENST00000495293 SIAH2O43255 324 aa9.12□□□□□ -0.95
RBM39-240ENST00000495293 PRR7Q8TB68 274 aa9.12□□□□□ -0.95
RBM39-240ENST00000495293 TBC1D2Q9BYX2 928 aa9.12□□□□□ -0.95
RBM39-240ENST00000495293 CCNYL3P0C7X3 344 aa9.11□□□□□ -0.95
RBM39-240ENST00000495293 SH3BP2P78314 561 aa9.11□□□□□ -0.95
RBM39-240ENST00000495293 RSBN1LQ6PCB5 846 aaPredicted RBP9.1□□□□□ -0.95
RBM39-240ENST00000495293 CFAP99D6REC4 459 aa9.09□□□□□ -0.95
RBM39-240ENST00000495293 PTPRNQ16849 979 aa9.09□□□□□ -0.95
RBM39-240ENST00000495293 LCE2CQ5TA81 110 aa9.09□□□□□ -0.95
RBM39-240ENST00000495293 ATP13A2Q9NQ11 1180 aa9.09□□□□□ -0.95
RBM39-240ENST00000495293 MTMR2Q13614 643 aa9.08□□□□□ -0.96
RBM39-240ENST00000495293 LINC01559Q495D7 138 aa9.08□□□□□ -0.96
RBM39-240ENST00000495293 UNC93B1Q9H1C4 597 aa9.08□□□□□ -0.96
RBM39-240ENST00000495293 EVA1BQ9NVM1 165 aa9.08□□□□□ -0.96
RBM39-240ENST00000495293 STK17AQ9UEE5 414 aa9.08□□□□□ -0.96
RBM39-240ENST00000495293 ALDH1A1P00352 501 aa9.07□□□□□ -0.96
RBM39-240ENST00000495293 SNRPBP14678 240 aaKnown RBP9.07□□□□□ -0.96
RBM39-240ENST00000495293 C11orf95C9JLR9 678 aaPredicted RBP9.06□□□□□ -0.96
RBM39-240ENST00000495293 WFS1O76024 890 aa9.06□□□□□ -0.96
RBM39-240ENST00000495293 CABLES1Q8TDN4 633 aa9.06□□□□□ -0.96
RBM39-240ENST00000495293 BAP1Q92560 729 aa9.06□□□□□ -0.96
RBM39-240ENST00000495293 AK7Q96M32 723 aa9.06□□□□□ -0.96
RBM39-240ENST00000495293 SPTLC1O15269 473 aa9.05□□□□□ -0.96
RBM39-240ENST00000495293 HRCP23327 699 aa9.05□□□□□ -0.96
RBM39-240ENST00000495293 KCNH2Q12809 1159 aa9.05□□□□□ -0.96
RBM39-240ENST00000495293 EHBP1Q8NDI1 1231 aa9.05□□□□□ -0.96
RBM39-240ENST00000495293 SLC24A3Q9HC58 644 aa9.05□□□□□ -0.96
RBM39-240ENST00000495293 TLL2Q9Y6L7 1015 aa9.05□□□□□ -0.96
RBM39-240ENST00000495293 DESI1Q6ICB0 168 aa9.04□□□□□ -0.96
RBM39-240ENST00000495293 LIMD1Q9UGP4 676 aa9.04□□□□□ -0.96
RBM39-240ENST00000495293 PER1O15534 1290 aaPredicted RBP9.03□□□□□ -0.96
RBM39-240ENST00000495293 WIPF1O43516 503 aa9.03□□□□□ -0.96
RBM39-240ENST00000495293 GJA5P36382 358 aa9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms