RNA–Protein interactions for RNA: ENST00000495288.5

PSMB4-206, Transcript of proteasome subunit beta 4, humanhuman

TSL 2

Gene PSMB4, Length 986 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMB4-206ENST00000495288 CDK19Q9BWU1 502 aa24.12■■□□□ 1.45
PSMB4-206ENST00000495288 PANK3Q9H999 370 aa24.12■■□□□ 1.45
PSMB4-206ENST00000495288 CABP2Q9NPB3 220 aa24.12■■□□□ 1.45
PSMB4-206ENST00000495288 TMC1Q8TDI8 760 aa24.11■■□□□ 1.45
PSMB4-206ENST00000495288 LMTK3Q96Q04 1460 aa24.11■■□□□ 1.45
PSMB4-206ENST00000495288 KNDC1Q76NI1 1749 aa24.1■■□□□ 1.45
PSMB4-206ENST00000495288 KCNA6P17658 529 aa24.1■■□□□ 1.45
PSMB4-206ENST00000495288 CPS1P31327 1500 aa24.1■■□□□ 1.45
PSMB4-206ENST00000495288 CNGB1Q14028 1251 aaPredicted RBP24.09■■□□□ 1.45
PSMB4-206ENST00000495288 PUS7Q96PZ0 661 aaKnown RBP24.08■■□□□ 1.45
PSMB4-206ENST00000495288 TULP4Q9NRJ4 1543 aa24.07■■□□□ 1.44
PSMB4-206ENST00000495288 WASLO00401 505 aaPredicted RBP24.05■■□□□ 1.44
PSMB4-206ENST00000495288 SLC12A5Q9H2X9 1139 aa24.04■■□□□ 1.44
PSMB4-206ENST00000495288 PTCH1Q13635 1447 aa24.02■■□□□ 1.44
PSMB4-206ENST00000495288 XRN1Q8IZH2 1706 aaKnown RBP24.01■■□□□ 1.43
PSMB4-206ENST00000495288 KNSTRNQ9Y448 316 aa24■■□□□ 1.43
PSMB4-206ENST00000495288 CHD2O14647 1828 aaKnown RBP23.99■■□□□ 1.43
PSMB4-206ENST00000495288 PER1O15534 1290 aaPredicted RBP23.99■■□□□ 1.43
PSMB4-206ENST00000495288 ATAD2Q6PL18 1390 aa23.99■■□□□ 1.43
PSMB4-206ENST00000495288 PROSER2Q86WR7 435 aaPredicted RBP23.98■■□□□ 1.43
PSMB4-206ENST00000495288 RBM33Q96EV2 1170 aaKnown RBP23.98■■□□□ 1.43
PSMB4-206ENST00000495288 SIPA1L2Q9P2F8 1722 aaPredicted RBP23.97■■□□□ 1.43
PSMB4-206ENST00000495288 C14orf37Q86TY3 774 aa23.96■■□□□ 1.43
PSMB4-206ENST00000495288 NUDT16Q96DE0 195 aaKnown RBP23.96■■□□□ 1.43
PSMB4-206ENST00000495288 PRKRIP1Q9H875 184 aaPredicted RBP23.96■■□□□ 1.43
PSMB4-206ENST00000495288 CABP1Q9NZU7 370 aa23.96■■□□□ 1.43
PSMB4-206ENST00000495288 NUTM2FA1L443 756 aa23.95■■□□□ 1.42
PSMB4-206ENST00000495288 MYOM1P52179 1685 aa23.95■■□□□ 1.42
PSMB4-206ENST00000495288 CC2D1BQ5T0F9 858 aaKnown RBP23.93■■□□□ 1.42
PSMB4-206ENST00000495288 CARD14Q9BXL6 1004 aa23.93■■□□□ 1.42
PSMB4-206ENST00000495288 TERF2IPQ9NYB0 399 aa23.92■■□□□ 1.42
PSMB4-206ENST00000495288 STRCQ7RTU9 1775 aa23.92■■□□□ 1.42
PSMB4-206ENST00000495288 NINLQ9Y2I6 1382 aa23.91■■□□□ 1.42
PSMB4-206ENST00000495288 HDGFL2Q7Z4V5 671 aaPredicted RBP23.9■■□□□ 1.42
PSMB4-206ENST00000495288 CCDC61Q9Y6R9 512 aa23.9■■□□□ 1.42
PSMB4-206ENST00000495288 KTN1Q86UP2 1357 aaKnown RBP23.9■■□□□ 1.42
PSMB4-206ENST00000495288 CCER2I3L3R5 266 aa23.89■■□□□ 1.41
PSMB4-206ENST00000495288 DMRT2Q9Y5R5 561 aa23.89■■□□□ 1.41
PSMB4-206ENST00000495288 PRR36Q9H6K5 1346 aa23.88■■□□□ 1.41
PSMB4-206ENST00000495288 ADGRB2O60241 1585 aa23.88■■□□□ 1.41
PSMB4-206ENST00000495288 RALBP1Q15311 655 aa23.88■■□□□ 1.41
PSMB4-206ENST00000495288 NWD1Q149M9 1564 aa23.87■■□□□ 1.41
PSMB4-206ENST00000495288 ANKRD36BQ8N2N9 1353 aa23.87■■□□□ 1.41
PSMB4-206ENST00000495288 PPIP5K1Q6PFW1 1433 aa23.86■■□□□ 1.41
PSMB4-206ENST00000495288 NSD3Q9BZ95 1437 aa23.85■■□□□ 1.41
PSMB4-206ENST00000495288 AMER1Q5JTC6 1135 aaPredicted RBP23.85■■□□□ 1.41
PSMB4-206ENST00000495288 A0A1W2PP64 1363 aa23.83■■□□□ 1.41
PSMB4-206ENST00000495288 NKTRP30414 1462 aaKnown RBP23.82■■□□□ 1.4
PSMB4-206ENST00000495288 ADGRL3Q9HAR2 1447 aa23.82■■□□□ 1.4
PSMB4-206ENST00000495288 ATP7BP35670 1465 aa23.81■■□□□ 1.4
PSMB4-206ENST00000495288 CGNL1Q0VF96 1302 aa23.8■■□□□ 1.4
PSMB4-206ENST00000495288 ZNF335Q9H4Z2 1342 aaPredicted RBP23.8■■□□□ 1.4
PSMB4-206ENST00000495288 TMEM94Q12767 1356 aa23.79■■□□□ 1.4
PSMB4-206ENST00000495288 PLEKHG3A1L390 1219 aa23.79■■□□□ 1.4
PSMB4-206ENST00000495288 AEBP2Q6ZN18 517 aaPredicted RBP23.79■■□□□ 1.4
PSMB4-206ENST00000495288 PMFBP1Q8TBY8 1022 aa23.79■■□□□ 1.4
PSMB4-206ENST00000495288 CD163L1Q9NR16 1453 aa23.79■■□□□ 1.4
PSMB4-206ENST00000495288 PARD3Q8TEW0 1356 aa23.78■■□□□ 1.4
PSMB4-206ENST00000495288 C19orf44Q9H6X5 657 aa23.78■■□□□ 1.4
PSMB4-206ENST00000495288 NALCNQ8IZF0 1738 aa23.78■■□□□ 1.4
PSMB4-206ENST00000495288 MYBBP1AQ9BQG0 1328 aaKnown RBP23.78■■□□□ 1.4
PSMB4-206ENST00000495288 NPC1L1Q9UHC9 1359 aa23.78■■□□□ 1.4
PSMB4-206ENST00000495288 CCDC184Q52MB2 194 aa23.77■■□□□ 1.4
PSMB4-206ENST00000495288 ZNF692Q9BU19 519 aaPredicted RBP23.77■■□□□ 1.4
PSMB4-206ENST00000495288 MRS2Q9HD23 443 aa23.77■■□□□ 1.4
PSMB4-206ENST00000495288 STRCP1A6NGW2 1772 aa23.77■■□□□ 1.4
PSMB4-206ENST00000495288 ACEP12821 1306 aa23.77■■□□□ 1.4
PSMB4-206ENST00000495288 MORC1Q86VD1 984 aa23.76■■□□□ 1.39
PSMB4-206ENST00000495288 SUGP2Q8IX01 1082 aaKnown RBP eCLIP23.76■■□□□ 1.39
PSMB4-206ENST00000495288 NGDNQ8NEJ9 315 aaKnown RBP23.76■■□□□ 1.39
PSMB4-206ENST00000495288 ANKARQ7Z5J8 1434 aa23.76■■□□□ 1.39
PSMB4-206ENST00000495288 ATF3P18847 181 aa23.75■■□□□ 1.39
PSMB4-206ENST00000495288 YTHDC1Q96MU7 727 aaKnown RBP23.75■■□□□ 1.39
PSMB4-206ENST00000495288 CDC42BPGQ6DT37 1551 aa23.74■■□□□ 1.39
PSMB4-206ENST00000495288 FMN2Q9NZ56 1722 aa23.74■■□□□ 1.39
PSMB4-206ENST00000495288 CPSF1Q10570 1443 aaKnown RBP23.73■■□□□ 1.39
PSMB4-206ENST00000495288 USP32Q8NFA0 1604 aa23.73■■□□□ 1.39
PSMB4-206ENST00000495288 ESCO1Q5FWF5 840 aa23.72■■□□□ 1.39
PSMB4-206ENST00000495288 NCOA3Q9Y6Q9 1424 aa23.71■■□□□ 1.39
PSMB4-206ENST00000495288 GGNBP2Q9H3C7 697 aa23.71■■□□□ 1.39
PSMB4-206ENST00000495288 PHF8Q9UPP1 1060 aa23.71■■□□□ 1.39
PSMB4-206ENST00000495288 FYB1O15117 783 aa23.7■■□□□ 1.38
PSMB4-206ENST00000495288 PPP2R1AP30153 589 aa23.7■■□□□ 1.38
PSMB4-206ENST00000495288 TNNT2P45379 298 aaPredicted RBP23.7■■□□□ 1.38
PSMB4-206ENST00000495288 NLRP13Q86W25 1043 aa23.7■■□□□ 1.38
PSMB4-206ENST00000495288 RGPD8O14715 1765 aaPredicted RBP23.68■■□□□ 1.38
PSMB4-206ENST00000495288 NSD2O96028 1365 aa23.68■■□□□ 1.38
PSMB4-206ENST00000495288 MSH6P52701 1360 aa23.68■■□□□ 1.38
PSMB4-206ENST00000495288 TOPAZ1Q8N9V7 1692 aa23.68■■□□□ 1.38
PSMB4-206ENST00000495288 EDC4Q6P2E9 1401 aaKnown RBP23.67■■□□□ 1.38
PSMB4-206ENST00000495288 LRRC7Q96NW7 1537 aa23.67■■□□□ 1.38
PSMB4-206ENST00000495288 ITSN1Q15811 1721 aa23.67■■□□□ 1.38
PSMB4-206ENST00000495288 CADPS2Q86UW7 1296 aa23.66■■□□□ 1.38
PSMB4-206ENST00000495288 NME9Q86XW9 330 aa23.66■■□□□ 1.38
PSMB4-206ENST00000495288 ORAI2Q96SN7 254 aa23.66■■□□□ 1.38
PSMB4-206ENST00000495288 BRD4O60885 1362 aaPredicted RBP23.65■■□□□ 1.38
PSMB4-206ENST00000495288 TTC21BQ7Z4L5 1316 aa23.65■■□□□ 1.38
PSMB4-206ENST00000495288 FAM9BQ8IZU0 186 aa23.65■■□□□ 1.38
PSMB4-206ENST00000495288 POLR3AO14802 1390 aaPredicted RBP23.64■■□□□ 1.37
PSMB4-206ENST00000495288 PSME1Q06323 249 aa23.63■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 79 ms