RNA–Protein interactions for RNA: ENST00000495172.1

GARNL3-219, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 4

Gene GARNL3, Length 737 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-219ENST00000495172 PIK3R4Q99570 1358 aa14.47□□□□□ -0.09
GARNL3-219ENST00000495172 SLIT2O94813 1529 aa14.46□□□□□ -0.09
GARNL3-219ENST00000495172 A0A0G2JS52 829 aa14.46□□□□□ -0.09
GARNL3-219ENST00000495172 PLEKHG5O94827 1062 aa14.46□□□□□ -0.09
GARNL3-219ENST00000495172 MYT1Q01538 1121 aa14.46□□□□□ -0.09
GARNL3-219ENST00000495172 SLC52A1Q9NWF4 448 aa14.46□□□□□ -0.09
GARNL3-219ENST00000495172 PPP1R1BQ9UD71 204 aaPredicted RBP14.46□□□□□ -0.09
GARNL3-219ENST00000495172 TNS1Q9HBL0 1735 aaKnown RBP14.45□□□□□ -0.1
GARNL3-219ENST00000495172 CCDC9Q9Y3X0 531 aaKnown RBP14.45□□□□□ -0.1
GARNL3-219ENST00000495172 LMTK2Q8IWU2 1503 aa14.45□□□□□ -0.1
GARNL3-219ENST00000495172 KANK1Q14678 1352 aa14.45□□□□□ -0.1
GARNL3-219ENST00000495172 RGPD1P0DJD0 1748 aa14.44□□□□□ -0.1
GARNL3-219ENST00000495172 METP08581 1390 aa14.44□□□□□ -0.1
GARNL3-219ENST00000495172 NRXN3Q9Y4C0 1643 aa14.44□□□□□ -0.1
GARNL3-219ENST00000495172 DCAF8L1A6NGE4 600 aa14.43□□□□□ -0.1
GARNL3-219ENST00000495172 ERBINQ96RT1 1412 aa14.42□□□□□ -0.1
GARNL3-219ENST00000495172 HDGFP51858 240 aaKnown RBP14.41□□□□□ -0.1
GARNL3-219ENST00000495172 ABCF1Q8NE71 845 aaKnown RBP eCLIP14.4□□□□□ -0.1
GARNL3-219ENST00000495172 PXDNQ92626 1479 aa14.39□□□□□ -0.11
GARNL3-219ENST00000495172 ONECUT3O60422 494 aaPredicted RBP14.39□□□□□ -0.11
GARNL3-219ENST00000495172 FAM98CQ17RN3 349 aaKnown RBP14.39□□□□□ -0.11
GARNL3-219ENST00000495172 CAMKK2Q96RR4 588 aa14.39□□□□□ -0.11
GARNL3-219ENST00000495172 VPS72Q15906 364 aa14.38□□□□□ -0.11
GARNL3-219ENST00000495172 PLCH1Q4KWH8 1693 aa14.38□□□□□ -0.11
GARNL3-219ENST00000495172 NINLQ9Y2I6 1382 aa14.37□□□□□ -0.11
GARNL3-219ENST00000495172 NUP188Q5SRE5 1749 aa14.36□□□□□ -0.11
GARNL3-219ENST00000495172 FOXO3O43524 673 aa14.36□□□□□ -0.11
GARNL3-219ENST00000495172 CABLES1Q8TDN4 633 aa14.36□□□□□ -0.11
GARNL3-219ENST00000495172 SPON1Q9HCB6 807 aa14.36□□□□□ -0.11
GARNL3-219ENST00000495172 USP32Q8NFA0 1604 aa14.36□□□□□ -0.11
GARNL3-219ENST00000495172 KCNQ2O43526 872 aa14.35□□□□□ -0.11
GARNL3-219ENST00000495172 TRIM37O94972 964 aa14.35□□□□□ -0.11
GARNL3-219ENST00000495172 CROCC2H7BZ55 1655 aa14.35□□□□□ -0.11
GARNL3-219ENST00000495172 DISP2A7MBM2 1401 aa14.34□□□□□ -0.11
GARNL3-219ENST00000495172 CHIC2Q9UKJ5 165 aa14.34□□□□□ -0.11
GARNL3-219ENST00000495172 CHD4Q14839 1912 aa14.34□□□□□ -0.11
GARNL3-219ENST00000495172 ABCC5O15440 1437 aa14.33□□□□□ -0.11
GARNL3-219ENST00000495172 ESCO1Q5FWF5 840 aa14.33□□□□□ -0.12
GARNL3-219ENST00000495172 NRKQ7Z2Y5 1582 aa14.33□□□□□ -0.12
GARNL3-219ENST00000495172 RREB1Q92766 1687 aa14.33□□□□□ -0.12
GARNL3-219ENST00000495172 GOLGB1Q14789 3259 aaKnown RBP14.32□□□□□ -0.12
GARNL3-219ENST00000495172 NUTM2FA1L443 756 aa14.32□□□□□ -0.12
GARNL3-219ENST00000495172 PDGFDQ9GZP0 370 aaPredicted RBP14.32□□□□□ -0.12
GARNL3-219ENST00000495172 PTPN23Q9H3S7 1636 aa14.32□□□□□ -0.12
GARNL3-219ENST00000495172 MYOM1P52179 1685 aa14.31□□□□□ -0.12
GARNL3-219ENST00000495172 GIGYF1O75420 1035 aaPredicted RBP14.31□□□□□ -0.12
GARNL3-219ENST00000495172 CAPN15O75808 1086 aa14.31□□□□□ -0.12
GARNL3-219ENST00000495172 APBA3O96018 575 aa14.31□□□□□ -0.12
GARNL3-219ENST00000495172 NPHP3Q7Z494 1330 aa14.3□□□□□ -0.12
GARNL3-219ENST00000495172 ROBO2Q9HCK4 1378 aa14.3□□□□□ -0.12
GARNL3-219ENST00000495172 RPRD2Q5VT52 1461 aaKnown RBP14.3□□□□□ -0.12
GARNL3-219ENST00000495172 MYOM3Q5VTT5 1437 aa14.29□□□□□ -0.12
GARNL3-219ENST00000495172 ADGRL2O95490 1459 aa14.29□□□□□ -0.12
GARNL3-219ENST00000495172 NWD2Q9ULI1 1742 aa14.28□□□□□ -0.12
GARNL3-219ENST00000495172 NRAPQ86VF7 1730 aa14.27□□□□□ -0.13
GARNL3-219ENST00000495172 FAM83GA6ND36 823 aa14.26□□□□□ -0.13
GARNL3-219ENST00000495172 HAP1P54257 671 aaPredicted RBP14.26□□□□□ -0.13
GARNL3-219ENST00000495172 ADGRB2O60241 1585 aa14.26□□□□□ -0.13
GARNL3-219ENST00000495172 E9PCH4 1651 aa14.25□□□□□ -0.13
GARNL3-219ENST00000495172 ABCA3Q99758 1704 aa14.24□□□□□ -0.13
GARNL3-219ENST00000495172 SPATA31A3Q5VYP0 1347 aa14.24□□□□□ -0.13
GARNL3-219ENST00000495172 ZBTB7AO95365 584 aa14.24□□□□□ -0.13
GARNL3-219ENST00000495172 NBPF8Q3BBV2 869 aa14.23□□□□□ -0.13
GARNL3-219ENST00000495172 NBPF14Q5TI25 921 aa14.23□□□□□ -0.13
GARNL3-219ENST00000495172 DAPK1P53355 1430 aa14.23□□□□□ -0.13
GARNL3-219ENST00000495172 KANK4Q5T7N3 995 aaPredicted RBP14.22□□□□□ -0.13
GARNL3-219ENST00000495172 FHDC1Q9C0D6 1143 aaPredicted RBP14.22□□□□□ -0.13
GARNL3-219ENST00000495172 ATF5Q9Y2D1 282 aaPredicted RBP14.22□□□□□ -0.13
GARNL3-219ENST00000495172 THSD7AQ9UPZ6 1657 aa14.22□□□□□ -0.13
GARNL3-219ENST00000495172 CASZ1Q86V15 1759 aa14.22□□□□□ -0.13
GARNL3-219ENST00000495172 ANO8Q9HCE9 1232 aaPredicted RBP14.21□□□□□ -0.13
GARNL3-219ENST00000495172 SHANK3Q9BYB0 1731 aa14.21□□□□□ -0.14
GARNL3-219ENST00000495172 PTGER2P43116 358 aa14.2□□□□□ -0.14
GARNL3-219ENST00000495172 SYT17Q9BSW7 474 aa14.2□□□□□ -0.14
GARNL3-219ENST00000495172 BTG4Q9NY30 223 aa14.2□□□□□ -0.14
GARNL3-219ENST00000495172 ZNF326Q5BKZ1 582 aaKnown RBP14.19□□□□□ -0.14
GARNL3-219ENST00000495172 LMOD2Q6P5Q4 547 aa14.18□□□□□ -0.14
GARNL3-219ENST00000495172 KRT28Q7Z3Y7 464 aa14.17□□□□□ -0.14
GARNL3-219ENST00000495172 PARD3Q8TEW0 1356 aa14.17□□□□□ -0.14
GARNL3-219ENST00000495172 ANKRD30AQ9BXX3 1397 aa14.17□□□□□ -0.14
GARNL3-219ENST00000495172 SPATA31A5Q5VU36 1347 aa14.16□□□□□ -0.14
GARNL3-219ENST00000495172 SPATA31A7Q8IWB4 1347 aa14.16□□□□□ -0.14
GARNL3-219ENST00000495172 IQGAP3Q86VI3 1631 aa14.16□□□□□ -0.14
GARNL3-219ENST00000495172 FAM196AQ6ZSG2 479 aa14.15□□□□□ -0.14
GARNL3-219ENST00000495172 CDC42BPGQ6DT37 1551 aa14.14□□□□□ -0.15
GARNL3-219ENST00000495172 TNS3Q68CZ2 1445 aa14.14□□□□□ -0.15
GARNL3-219ENST00000495172 COL13A1Q5TAT6 717 aaPredicted RBP14.13□□□□□ -0.15
GARNL3-219ENST00000495172 LRPPRCP42704 1394 aaKnown RBP14.12□□□□□ -0.15
GARNL3-219ENST00000495172 RGPD8O14715 1765 aaPredicted RBP14.12□□□□□ -0.15
GARNL3-219ENST00000495172 NEXMIFQ5QGS0 1516 aa14.12□□□□□ -0.15
GARNL3-219ENST00000495172 NAIPQ13075 1403 aa14.12□□□□□ -0.15
GARNL3-219ENST00000495172 SLC34A2O95436 690 aa14.11□□□□□ -0.15
GARNL3-219ENST00000495172 HSPA6P17066 643 aa14.1□□□□□ -0.15
GARNL3-219ENST00000495172 WAPLQ7Z5K2 1190 aa14.1□□□□□ -0.15
GARNL3-219ENST00000495172 DLC1Q96QB1 1528 aa14.1□□□□□ -0.15
GARNL3-219ENST00000495172 CCDC144AA2RUR9 1427 aa14.09□□□□□ -0.15
GARNL3-219ENST00000495172 ANKRD50Q9ULJ7 1429 aa14.09□□□□□ -0.15
GARNL3-219ENST00000495172 GPR162Q16538 588 aa14.09□□□□□ -0.15
GARNL3-219ENST00000495172 PTF1AQ7RTS3 328 aa14.09□□□□□ -0.15
GARNL3-219ENST00000495172 PELP1Q8IZL8 1130 aaKnown RBP14.09□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms