RNA–Protein interactions for RNA: ENST00000494836.2

YIF1A-209, Transcript of Yip1 interacting factor homolog A, membrane trafficking protein, humanhuman

TSL 2

Gene YIF1A, Length 540 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YIF1A-209ENST00000494836 TRPM1Q7Z4N2 1603 aa23.3■■□□□ 1.32
YIF1A-209ENST00000494836 CDC42BPGQ6DT37 1551 aa23.29■■□□□ 1.32
YIF1A-209ENST00000494836 PRAM1Q96QH2 718 aa23.29■■□□□ 1.32
YIF1A-209ENST00000494836 MST1RQ04912 1400 aa23.27■■□□□ 1.32
YIF1A-209ENST00000494836 NBPF1Q3BBV0 1214 aa23.27■■□□□ 1.32
YIF1A-209ENST00000494836 POGKQ9P215 609 aa23.27■■□□□ 1.32
YIF1A-209ENST00000494836 ARHGEF28Q8N1W1 1705 aaKnown RBP23.27■■□□□ 1.32
YIF1A-209ENST00000494836 HSPA1LP34931 641 aa23.24■■□□□ 1.31
YIF1A-209ENST00000494836 SAFB2Q14151 953 aaKnown RBP eCLIP23.24■■□□□ 1.31
YIF1A-209ENST00000494836 NBPF8Q3BBV2 869 aa23.23■■□□□ 1.31
YIF1A-209ENST00000494836 ROCK2O75116 1388 aaKnown RBP23.23■■□□□ 1.31
YIF1A-209ENST00000494836 C1orf167Q5SNV9 1468 aa23.21■■□□□ 1.31
YIF1A-209ENST00000494836 ADGRB2O60241 1585 aa23.2■■□□□ 1.3
YIF1A-209ENST00000494836 BRINP3Q76B58 766 aa23.19■■□□□ 1.3
YIF1A-209ENST00000494836 FMN2Q9NZ56 1722 aa23.19■■□□□ 1.3
YIF1A-209ENST00000494836 RALGAPBQ86X10 1494 aa23.18■■□□□ 1.3
YIF1A-209ENST00000494836 TIMELESSQ9UNS1 1208 aa23.18■■□□□ 1.3
YIF1A-209ENST00000494836 GPRASP1Q5JY77 1395 aa23.16■■□□□ 1.3
YIF1A-209ENST00000494836 MINK1Q8N4C8 1332 aaPredicted RBP23.16■■□□□ 1.3
YIF1A-209ENST00000494836 PHLPP1O60346 1717 aa23.15■■□□□ 1.3
YIF1A-209ENST00000494836 AHDC1Q5TGY3 1603 aaPredicted RBP23.15■■□□□ 1.3
YIF1A-209ENST00000494836 HIRIP3Q9BW71 556 aaPredicted RBP23.14■■□□□ 1.29
YIF1A-209ENST00000494836 NUTM2FA1L443 756 aa23.13■■□□□ 1.29
YIF1A-209ENST00000494836 CENPJQ9HC77 1338 aaPredicted RBP23.12■■□□□ 1.29
YIF1A-209ENST00000494836 EIF3AQ14152 1382 aaKnown RBP23.12■■□□□ 1.29
YIF1A-209ENST00000494836 NHSL1Q5SYE7 1610 aa23.11■■□□□ 1.29
YIF1A-209ENST00000494836 ORAI2Q96SN7 254 aa23.11■■□□□ 1.29
YIF1A-209ENST00000494836 CARD11Q9BXL7 1154 aa23.11■■□□□ 1.29
YIF1A-209ENST00000494836 QRICH2Q9H0J4 1663 aa23.1■■□□□ 1.29
YIF1A-209ENST00000494836 ESCO1Q5FWF5 840 aa23.1■■□□□ 1.29
YIF1A-209ENST00000494836 COL16A1Q07092 1604 aaPredicted RBP23.1■■□□□ 1.29
YIF1A-209ENST00000494836 ANKARQ7Z5J8 1434 aa23.08■■□□□ 1.29
YIF1A-209ENST00000494836 WASLO00401 505 aaPredicted RBP23.08■■□□□ 1.29
YIF1A-209ENST00000494836 TULP4Q9NRJ4 1543 aa23.08■■□□□ 1.28
YIF1A-209ENST00000494836 USP32Q8NFA0 1604 aa23.07■■□□□ 1.28
YIF1A-209ENST00000494836 KIF1AQ12756 1690 aa23.06■■□□□ 1.28
YIF1A-209ENST00000494836 RGPD8O14715 1765 aaPredicted RBP23.05■■□□□ 1.28
YIF1A-209ENST00000494836 DDX17Q92841 729 aaKnown RBP23.04■■□□□ 1.28
YIF1A-209ENST00000494836 NPHP3Q7Z494 1330 aa23.02■■□□□ 1.28
YIF1A-209ENST00000494836 JCADQ9P266 1359 aa23.01■■□□□ 1.27
YIF1A-209ENST00000494836 ATP7BP35670 1465 aa23.01■■□□□ 1.27
YIF1A-209ENST00000494836 CDK19Q9BWU1 502 aa23.01■■□□□ 1.27
YIF1A-209ENST00000494836 PRR36Q9H6K5 1346 aa23.01■■□□□ 1.27
YIF1A-209ENST00000494836 PHF8Q9UPP1 1060 aa23■■□□□ 1.27
YIF1A-209ENST00000494836 ITSN1Q15811 1721 aa22.99■■□□□ 1.27
YIF1A-209ENST00000494836 FOXO3O43524 673 aa22.99■■□□□ 1.27
YIF1A-209ENST00000494836 SOS2Q07890 1332 aaPredicted RBP22.99■■□□□ 1.27
YIF1A-209ENST00000494836 PXDNQ92626 1479 aa22.98■■□□□ 1.27
YIF1A-209ENST00000494836 SHPRHQ149N8 1683 aa22.97■■□□□ 1.27
YIF1A-209ENST00000494836 LRRC59Q96AG4 307 aaKnown RBP22.97■■□□□ 1.27
YIF1A-209ENST00000494836 NUDT16Q96DE0 195 aaKnown RBP22.97■■□□□ 1.27
YIF1A-209ENST00000494836 SBNO2Q9Y2G9 1366 aa22.97■■□□□ 1.27
YIF1A-209ENST00000494836 SRPK2P78362 688 aaKnown RBP22.96■■□□□ 1.27
YIF1A-209ENST00000494836 EVC2Q86UK5 1308 aa22.96■■□□□ 1.27
YIF1A-209ENST00000494836 MED1Q15648 1581 aaPredicted RBP22.95■■□□□ 1.26
YIF1A-209ENST00000494836 TOPAZ1Q8N9V7 1692 aa22.95■■□□□ 1.26
YIF1A-209ENST00000494836 PMFBP1Q8TBY8 1022 aa22.95■■□□□ 1.26
YIF1A-209ENST00000494836 XPCQ01831 940 aaPredicted RBP22.94■■□□□ 1.26
YIF1A-209ENST00000494836 USP47Q96K76 1375 aa22.93■■□□□ 1.26
YIF1A-209ENST00000494836 CABP2Q9NPB3 220 aa22.93■■□□□ 1.26
YIF1A-209ENST00000494836 CCDC61Q9Y6R9 512 aa22.92■■□□□ 1.26
YIF1A-209ENST00000494836 SPATA31A6Q5VVP1 1343 aa22.91■■□□□ 1.26
YIF1A-209ENST00000494836 PNPLA6Q8IY17 1366 aa22.9■■□□□ 1.26
YIF1A-209ENST00000494836 ST20-MTHFSA0A0A6YYL1 179 aa22.9■■□□□ 1.26
YIF1A-209ENST00000494836 KRT28Q7Z3Y7 464 aa22.9■■□□□ 1.26
YIF1A-209ENST00000494836 PSME1Q06323 249 aa22.89■■□□□ 1.25
YIF1A-209ENST00000494836 NGDNQ8NEJ9 315 aaKnown RBP22.89■■□□□ 1.25
YIF1A-209ENST00000494836 PPIP5K1Q6PFW1 1433 aa22.88■■□□□ 1.25
YIF1A-209ENST00000494836 TNS3Q68CZ2 1445 aa22.85■■□□□ 1.25
YIF1A-209ENST00000494836 PLEKHG3A1L390 1219 aa22.85■■□□□ 1.25
YIF1A-209ENST00000494836 TESK2Q96S53 571 aa22.85■■□□□ 1.25
YIF1A-209ENST00000494836 SBNO1A3KN83 1393 aa22.85■■□□□ 1.25
YIF1A-209ENST00000494836 POLR3AO14802 1390 aaPredicted RBP22.85■■□□□ 1.25
YIF1A-209ENST00000494836 ATAD2Q6PL18 1390 aa22.85■■□□□ 1.25
YIF1A-209ENST00000494836 COL22A1Q8NFW1 1626 aaPredicted RBP22.85■■□□□ 1.25
YIF1A-209ENST00000494836 DISP3Q9P2K9 1392 aa22.85■■□□□ 1.25
YIF1A-209ENST00000494836 SPATA31A3Q5VYP0 1347 aa22.84■■□□□ 1.25
YIF1A-209ENST00000494836 LRP6O75581 1613 aa22.84■■□□□ 1.25
YIF1A-209ENST00000494836 SLC24A1O60721 1099 aa22.84■■□□□ 1.25
YIF1A-209ENST00000494836 TRPM3Q9HCF6 1732 aaPredicted RBP22.84■■□□□ 1.25
YIF1A-209ENST00000494836 ACEP12821 1306 aa22.83■■□□□ 1.25
YIF1A-209ENST00000494836 NUTM2BA6NNL0 878 aaPredicted RBP22.82■■□□□ 1.24
YIF1A-209ENST00000494836 NUTM2EB1AL46 878 aaPredicted RBP22.82■■□□□ 1.24
YIF1A-209ENST00000494836 NUTM2AQ8IVF1 878 aaPredicted RBP22.82■■□□□ 1.24
YIF1A-209ENST00000494836 PHF23Q9BUL5 403 aaPredicted RBP22.81■■□□□ 1.24
YIF1A-209ENST00000494836 CABP1Q9NZU7 370 aa22.81■■□□□ 1.24
YIF1A-209ENST00000494836 ARHGEF10O15013 1369 aa22.8■■□□□ 1.24
YIF1A-209ENST00000494836 MEX3CQ5U5Q3 659 aaKnown RBP22.79■■□□□ 1.24
YIF1A-209ENST00000494836 LMOD2Q6P5Q4 547 aa22.79■■□□□ 1.24
YIF1A-209ENST00000494836 ALS2Q96Q42 1657 aa22.78■■□□□ 1.24
YIF1A-209ENST00000494836 PAK3O75914 559 aaPredicted RBP22.77■■□□□ 1.24
YIF1A-209ENST00000494836 TMF1P82094 1093 aa22.77■■□□□ 1.24
YIF1A-209ENST00000494836 PUS7Q96PZ0 661 aaKnown RBP22.77■■□□□ 1.24
YIF1A-209ENST00000494836 EIF4G2P78344 907 aaKnown RBP eCLIP22.76■■□□□ 1.23
YIF1A-209ENST00000494836 USP6P35125 1406 aa22.74■■□□□ 1.23
YIF1A-209ENST00000494836 TMC1Q8TDI8 760 aa22.73■■□□□ 1.23
YIF1A-209ENST00000494836 BRD4O60885 1362 aaPredicted RBP22.73■■□□□ 1.23
YIF1A-209ENST00000494836 AKAP12Q02952 1782 aa22.73■■□□□ 1.23
YIF1A-209ENST00000494836 ADAMTS2O95450 1211 aa22.72■■□□□ 1.23
YIF1A-209ENST00000494836 ABCA3Q99758 1704 aa22.71■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms