RNA–Protein interactions for RNA: ENST00000494743.1

BRD3-206, Transcript of bromodomain containing 3, humanhuman

TSL 3

Gene BRD3, Length 507 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRD3-206ENST00000494743 SIRT1Q96EB6 747 aa16.94■□□□□ 0.3
BRD3-206ENST00000494743 PTCH1Q13635 1447 aa16.94■□□□□ 0.3
BRD3-206ENST00000494743 FAM135BQ49AJ0 1406 aa16.94■□□□□ 0.3
BRD3-206ENST00000494743 CCDC7Q96M83 1385 aa16.93■□□□□ 0.3
BRD3-206ENST00000494743 KIF7Q2M1P5 1343 aa16.93■□□□□ 0.3
BRD3-206ENST00000494743 ROBO2Q9HCK4 1378 aa16.92■□□□□ 0.3
BRD3-206ENST00000494743 PRAM1Q96QH2 718 aa16.92■□□□□ 0.3
BRD3-206ENST00000494743 QRICH2Q9H0J4 1663 aa16.91■□□□□ 0.3
BRD3-206ENST00000494743 PLEKHH1Q9ULM0 1364 aa16.91■□□□□ 0.3
BRD3-206ENST00000494743 NWD1Q149M9 1564 aa16.9■□□□□ 0.3
BRD3-206ENST00000494743 AMOTL2Q9Y2J4 779 aa16.9■□□□□ 0.3
BRD3-206ENST00000494743 SLC24A1O60721 1099 aa16.89■□□□□ 0.29
BRD3-206ENST00000494743 TMF1P82094 1093 aa16.89■□□□□ 0.29
BRD3-206ENST00000494743 TULP4Q9NRJ4 1543 aa16.88■□□□□ 0.29
BRD3-206ENST00000494743 WAPLQ7Z5K2 1190 aa16.88■□□□□ 0.29
BRD3-206ENST00000494743 KCNA6P17658 529 aa16.87■□□□□ 0.29
BRD3-206ENST00000494743 POGKQ9P215 609 aa16.87■□□□□ 0.29
BRD3-206ENST00000494743 CHD2O14647 1828 aaKnown RBP16.86■□□□□ 0.29
BRD3-206ENST00000494743 POTEAQ6S8J7 498 aa16.86■□□□□ 0.29
BRD3-206ENST00000494743 SAFB2Q14151 953 aaKnown RBP eCLIP16.85■□□□□ 0.29
BRD3-206ENST00000494743 NKTRP30414 1462 aaKnown RBP16.84■□□□□ 0.29
BRD3-206ENST00000494743 ADGRB2O60241 1585 aa16.84■□□□□ 0.29
BRD3-206ENST00000494743 CDCA8Q53HL2 280 aa16.83■□□□□ 0.28
BRD3-206ENST00000494743 STRCP1A6NGW2 1772 aa16.82■□□□□ 0.28
BRD3-206ENST00000494743 MINK1Q8N4C8 1332 aaPredicted RBP16.82■□□□□ 0.28
BRD3-206ENST00000494743 PUS7Q96PZ0 661 aaKnown RBP16.82■□□□□ 0.28
BRD3-206ENST00000494743 SIPA1L2Q9P2F8 1722 aaPredicted RBP16.82■□□□□ 0.28
BRD3-206ENST00000494743 EVC2Q86UK5 1308 aa16.81■□□□□ 0.28
BRD3-206ENST00000494743 LRRC7Q96NW7 1537 aa16.8■□□□□ 0.28
BRD3-206ENST00000494743 DDX10Q13206 875 aaKnown RBP16.8■□□□□ 0.28
BRD3-206ENST00000494743 WASLO00401 505 aaPredicted RBP16.77■□□□□ 0.28
BRD3-206ENST00000494743 DIEXFQ68CQ4 756 aaKnown RBP16.77■□□□□ 0.28
BRD3-206ENST00000494743 POLR3GLQ9BT43 218 aa16.77■□□□□ 0.28
BRD3-206ENST00000494743 MYOM1P52179 1685 aa16.77■□□□□ 0.28
BRD3-206ENST00000494743 CDK19Q9BWU1 502 aa16.76■□□□□ 0.27
BRD3-206ENST00000494743 ADGRL3Q9HAR2 1447 aa16.76■□□□□ 0.27
BRD3-206ENST00000494743 CABP2Q9NPB3 220 aa16.75■□□□□ 0.27
BRD3-206ENST00000494743 ATAD2Q6PL18 1390 aa16.75■□□□□ 0.27
BRD3-206ENST00000494743 NALCNQ8IZF0 1738 aa16.74■□□□□ 0.27
BRD3-206ENST00000494743 CDC42BPGQ6DT37 1551 aa16.74■□□□□ 0.27
BRD3-206ENST00000494743 NCOA3Q9Y6Q9 1424 aa16.74■□□□□ 0.27
BRD3-206ENST00000494743 ATP7BP35670 1465 aa16.73■□□□□ 0.27
BRD3-206ENST00000494743 SRPK2P78362 688 aaKnown RBP16.73■□□□□ 0.27
BRD3-206ENST00000494743 NINLQ9Y2I6 1382 aa16.73■□□□□ 0.27
BRD3-206ENST00000494743 PROSER2Q86WR7 435 aaPredicted RBP16.71■□□□□ 0.27
BRD3-206ENST00000494743 RBM33Q96EV2 1170 aaKnown RBP16.71■□□□□ 0.27
BRD3-206ENST00000494743 TMEM94Q12767 1356 aa16.71■□□□□ 0.27
BRD3-206ENST00000494743 PRR36Q9H6K5 1346 aa16.7■□□□□ 0.26
BRD3-206ENST00000494743 XIRP1Q702N8 1843 aaKnown RBP16.69■□□□□ 0.26
BRD3-206ENST00000494743 UPF1Q92900 1129 aaKnown RBP eCLIP16.69■□□□□ 0.26
BRD3-206ENST00000494743 ANKARQ7Z5J8 1434 aa16.69■□□□□ 0.26
BRD3-206ENST00000494743 CD163L1Q9NR16 1453 aa16.68■□□□□ 0.26
BRD3-206ENST00000494743 USP32Q8NFA0 1604 aa16.68■□□□□ 0.26
BRD3-206ENST00000494743 SLC12A5Q9H2X9 1139 aa16.68■□□□□ 0.26
BRD3-206ENST00000494743 PANK3Q9H999 370 aa16.68■□□□□ 0.26
BRD3-206ENST00000494743 DCCP43146 1447 aa16.68■□□□□ 0.26
BRD3-206ENST00000494743 TOPAZ1Q8N9V7 1692 aa16.68■□□□□ 0.26
BRD3-206ENST00000494743 FMN2Q9NZ56 1722 aa16.67■□□□□ 0.26
BRD3-206ENST00000494743 ANKRD36BQ8N2N9 1353 aa16.67■□□□□ 0.26
BRD3-206ENST00000494743 PER1O15534 1290 aaPredicted RBP16.67■□□□□ 0.26
BRD3-206ENST00000494743 NUDT16Q96DE0 195 aaKnown RBP16.67■□□□□ 0.26
BRD3-206ENST00000494743 PPIP5K1Q6PFW1 1433 aa16.66■□□□□ 0.26
BRD3-206ENST00000494743 CCDC61Q9Y6R9 512 aa16.66■□□□□ 0.26
BRD3-206ENST00000494743 TMC1Q8TDI8 760 aa16.65■□□□□ 0.26
BRD3-206ENST00000494743 C19orf44Q9H6X5 657 aa16.65■□□□□ 0.26
BRD3-206ENST00000494743 A0A1W2PP64 1363 aa16.64■□□□□ 0.26
BRD3-206ENST00000494743 CABP1Q9NZU7 370 aa16.64■□□□□ 0.25
BRD3-206ENST00000494743 C14orf37Q86TY3 774 aa16.63■□□□□ 0.25
BRD3-206ENST00000494743 CARD14Q9BXL6 1004 aa16.63■□□□□ 0.25
BRD3-206ENST00000494743 CPSF1Q10570 1443 aaKnown RBP16.62■□□□□ 0.25
BRD3-206ENST00000494743 PLEKHG3A1L390 1219 aa16.62■□□□□ 0.25
BRD3-206ENST00000494743 ROBO1Q9Y6N7 1651 aa16.62■□□□□ 0.25
BRD3-206ENST00000494743 NUTM2FA1L443 756 aa16.61■□□□□ 0.25
BRD3-206ENST00000494743 MSH6P52701 1360 aa16.61■□□□□ 0.25
BRD3-206ENST00000494743 NSD3Q9BZ95 1437 aa16.61■□□□□ 0.25
BRD3-206ENST00000494743 TERF2IPQ9NYB0 399 aa16.6■□□□□ 0.25
BRD3-206ENST00000494743 MST1RQ04912 1400 aa16.6■□□□□ 0.25
BRD3-206ENST00000494743 C1orf167Q5SNV9 1468 aa16.6■□□□□ 0.25
BRD3-206ENST00000494743 ITSN1Q15811 1721 aa16.59■□□□□ 0.25
BRD3-206ENST00000494743 AMER1Q5JTC6 1135 aaPredicted RBP16.59■□□□□ 0.25
BRD3-206ENST00000494743 POLR3AO14802 1390 aaPredicted RBP16.59■□□□□ 0.25
BRD3-206ENST00000494743 NPC1L1Q9UHC9 1359 aa16.59■□□□□ 0.25
BRD3-206ENST00000494743 HDGFL2Q7Z4V5 671 aaPredicted RBP16.58■□□□□ 0.24
BRD3-206ENST00000494743 ANP32CO43423 234 aa16.57■□□□□ 0.24
BRD3-206ENST00000494743 ATF3P18847 181 aa16.57■□□□□ 0.24
BRD3-206ENST00000494743 CADPS2Q86UW7 1296 aa16.57■□□□□ 0.24
BRD3-206ENST00000494743 MIER1Q8N108 512 aa16.57■□□□□ 0.24
BRD3-206ENST00000494743 KNSTRNQ9Y448 316 aa16.57■□□□□ 0.24
BRD3-206ENST00000494743 EDC4Q6P2E9 1401 aaKnown RBP16.56■□□□□ 0.24
BRD3-206ENST00000494743 ACEP12821 1306 aa16.56■□□□□ 0.24
BRD3-206ENST00000494743 PRKRIP1Q9H875 184 aaPredicted RBP16.56■□□□□ 0.24
BRD3-206ENST00000494743 SRCAPQ6ZRS2 3230 aa16.55■□□□□ 0.24
BRD3-206ENST00000494743 KTN1Q86UP2 1357 aaKnown RBP16.55■□□□□ 0.24
BRD3-206ENST00000494743 MON2Q7Z3U7 1717 aa16.55■□□□□ 0.24
BRD3-206ENST00000494743 NRKQ7Z2Y5 1582 aa16.55■□□□□ 0.24
BRD3-206ENST00000494743 USP6P35125 1406 aa16.54■□□□□ 0.24
BRD3-206ENST00000494743 SSH2Q76I76 1423 aa16.54■□□□□ 0.24
BRD3-206ENST00000494743 AKAP12Q02952 1782 aa16.54■□□□□ 0.24
BRD3-206ENST00000494743 PARD3Q8TEW0 1356 aa16.54■□□□□ 0.24
BRD3-206ENST00000494743 PHLPP1O60346 1717 aa16.54■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms