RNA–Protein interactions for RNA: ENST00000494667.5

PRKD3-210, Transcript of protein kinase D3, humanhuman

TSL 1 (best)

Gene PRKD3, Length 4,326 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKD3-210ENST00000494667 RRP7BPQ9NSQ0 103 aa6.01□□□□□ -1.45
PRKD3-210ENST00000494667 USP32Q8NFA0 1604 aa6.01□□□□□ -1.45
PRKD3-210ENST00000494667 TNPO1Q92973 898 aaKnown RBP6□□□□□ -1.45
PRKD3-210ENST00000494667 PLB1Q6P1J6 1458 aa6□□□□□ -1.45
PRKD3-210ENST00000494667 CADPSQ9ULU8 1353 aa6□□□□□ -1.45
PRKD3-210ENST00000494667 GABPB1Q06547 395 aaPredicted RBP6□□□□□ -1.45
PRKD3-210ENST00000494667 CCDC39Q9UFE4 941 aa6□□□□□ -1.45
PRKD3-210ENST00000494667 KIF16BQ96L93 1317 aa6□□□□□ -1.45
PRKD3-210ENST00000494667 CDK13Q14004 1512 aaKnown RBP6□□□□□ -1.45
PRKD3-210ENST00000494667 TOPBP1Q92547 1522 aa6□□□□□ -1.45
PRKD3-210ENST00000494667 E9PSI1 815 aa6□□□□□ -1.45
PRKD3-210ENST00000494667 ZNF710Q8N1W2 664 aa6□□□□□ -1.45
PRKD3-210ENST00000494667 ANP32BQ92688 251 aaKnown RBP6□□□□□ -1.45
PRKD3-210ENST00000494667 FEZ1Q99689 392 aa6□□□□□ -1.45
PRKD3-210ENST00000494667 FAM13BQ9NYF5 915 aa6□□□□□ -1.45
PRKD3-210ENST00000494667 ERBINQ96RT1 1412 aa6□□□□□ -1.45
PRKD3-210ENST00000494667 PPRC1Q5VV67 1664 aaKnown RBP5.99□□□□□ -1.45
PRKD3-210ENST00000494667 ANKRD7Q92527 254 aa5.99□□□□□ -1.45
PRKD3-210ENST00000494667 R3HCC1Q9Y3T6 440 aaKnown RBP5.99□□□□□ -1.45
PRKD3-210ENST00000494667 ADGRB2O60241 1585 aa5.99□□□□□ -1.45
PRKD3-210ENST00000494667 ADGRL1O94910 1474 aa5.99□□□□□ -1.45
PRKD3-210ENST00000494667 C22orf23Q9BZE7 217 aa5.99□□□□□ -1.45
PRKD3-210ENST00000494667 SPTLC3Q9NUV7 552 aa5.99□□□□□ -1.45
PRKD3-210ENST00000494667 CYP2E1P05181 493 aaPredicted RBP5.99□□□□□ -1.45
PRKD3-210ENST00000494667 PLA2R1Q13018 1463 aa5.99□□□□□ -1.45
PRKD3-210ENST00000494667 CEP152O94986 1710 aa5.99□□□□□ -1.45
PRKD3-210ENST00000494667 MAST1Q9Y2H9 1570 aa5.99□□□□□ -1.45
PRKD3-210ENST00000494667 TEX2Q8IWB9 1127 aa5.98□□□□□ -1.45
PRKD3-210ENST00000494667 FTSJ3Q8IY81 847 aaKnown RBP5.98□□□□□ -1.45
PRKD3-210ENST00000494667 HSCBQ8IWL3 235 aa5.98□□□□□ -1.45
PRKD3-210ENST00000494667 ZHX1Q9UKY1 873 aaPredicted RBP5.98□□□□□ -1.45
PRKD3-210ENST00000494667 MAGI2Q86UL8 1455 aa5.98□□□□□ -1.45
PRKD3-210ENST00000494667 DUOX2Q9NRD8 1548 aa5.98□□□□□ -1.45
PRKD3-210ENST00000494667 IQGAP3Q86VI3 1631 aa5.98□□□□□ -1.45
PRKD3-210ENST00000494667 TULP2O00295 520 aa5.98□□□□□ -1.45
PRKD3-210ENST00000494667 NBPF1Q3BBV0 1214 aa5.98□□□□□ -1.45
PRKD3-210ENST00000494667 TESK2Q96S53 571 aa5.98□□□□□ -1.45
PRKD3-210ENST00000494667 SLC4A1APQ9BWU0 796 aaKnown RBP5.98□□□□□ -1.45
PRKD3-210ENST00000494667 ANKRD50Q9ULJ7 1429 aa5.98□□□□□ -1.45
PRKD3-210ENST00000494667 MYO3AQ8NEV4 1616 aa5.97□□□□□ -1.45
PRKD3-210ENST00000494667 CTIFO43310 598 aaKnown RBP5.97□□□□□ -1.45
PRKD3-210ENST00000494667 CARD11Q9BXL7 1154 aa5.97□□□□□ -1.45
PRKD3-210ENST00000494667 GZF1Q9H116 711 aaPredicted RBP5.97□□□□□ -1.45
PRKD3-210ENST00000494667 RAPGEF6Q8TEU7 1601 aa5.97□□□□□ -1.45
PRKD3-210ENST00000494667 CFAP65Q6ZU64 1925 aaKnown RBP5.97□□□□□ -1.45
PRKD3-210ENST00000494667 MADDQ8WXG6 1647 aa5.97□□□□□ -1.45
PRKD3-210ENST00000494667 ST20-MTHFSA0A0A6YYL1 179 aa5.97□□□□□ -1.45
PRKD3-210ENST00000494667 HDAC1Q13547 482 aaPredicted RBP5.97□□□□□ -1.45
PRKD3-210ENST00000494667 TSPYL1Q9H0U9 437 aa5.97□□□□□ -1.45
PRKD3-210ENST00000494667 YY1AP1Q9H869 796 aa5.97□□□□□ -1.45
PRKD3-210ENST00000494667 RAD50Q92878 1312 aa5.97□□□□□ -1.45
PRKD3-210ENST00000494667 ABCA6Q8N139 1617 aa5.97□□□□□ -1.45
PRKD3-210ENST00000494667 KDM5AP29375 1690 aaKnown RBP5.96□□□□□ -1.45
PRKD3-210ENST00000494667 SPHKAPQ2M3C7 1700 aa5.96□□□□□ -1.45
PRKD3-210ENST00000494667 TTC37Q6PGP7 1564 aa5.96□□□□□ -1.46
PRKD3-210ENST00000494667 MMP14P50281 582 aa5.96□□□□□ -1.46
PRKD3-210ENST00000494667 FAM53CQ9NYF3 392 aa5.96□□□□□ -1.46
PRKD3-210ENST00000494667 ADAMTS8Q9UP79 889 aa5.96□□□□□ -1.46
PRKD3-210ENST00000494667 DISP3Q9P2K9 1392 aa5.96□□□□□ -1.46
PRKD3-210ENST00000494667 PIBF1Q8WXW3 757 aa5.96□□□□□ -1.46
PRKD3-210ENST00000494667 A2MP01023 1474 aa5.96□□□□□ -1.46
PRKD3-210ENST00000494667 MYOM2P54296 1465 aa5.96□□□□□ -1.46
PRKD3-210ENST00000494667 FOXD1Q16676 465 aa5.95□□□□□ -1.46
PRKD3-210ENST00000494667 DNAJC2Q99543 621 aaKnown RBP5.95□□□□□ -1.46
PRKD3-210ENST00000494667 RWDD1Q9H446 243 aaPredicted RBP5.95□□□□□ -1.46
PRKD3-210ENST00000494667 PDZRN3Q9UPQ7 1066 aa5.95□□□□□ -1.46
PRKD3-210ENST00000494667 INO80Q9ULG1 1556 aaPredicted RBP5.95□□□□□ -1.46
PRKD3-210ENST00000494667 GOLGA6L22H0YM25 854 aa5.95□□□□□ -1.46
PRKD3-210ENST00000494667 ZNF830Q96NB3 372 aaPredicted RBP5.95□□□□□ -1.46
PRKD3-210ENST00000494667 KIAA0556O60303 1618 aa5.95□□□□□ -1.46
PRKD3-210ENST00000494667 CT47B1P0C2W7 299 aaPredicted RBP5.95□□□□□ -1.46
PRKD3-210ENST00000494667 FKBP5Q13451 457 aaPredicted RBP5.95□□□□□ -1.46
PRKD3-210ENST00000494667 PDCL2Q8N4E4 241 aa5.95□□□□□ -1.46
PRKD3-210ENST00000494667 KIF2CQ99661 725 aa5.95□□□□□ -1.46
PRKD3-210ENST00000494667 OGFRQ9NZT2 677 aa5.95□□□□□ -1.46
PRKD3-210ENST00000494667 PPP2R1AP30153 589 aa5.95□□□□□ -1.46
PRKD3-210ENST00000494667 KIAA2012Q0VF49 1180 aa5.95□□□□□ -1.46
PRKD3-210ENST00000494667 UVSSAQ2YD98 709 aa5.95□□□□□ -1.46
PRKD3-210ENST00000494667 POLR3AO14802 1390 aaPredicted RBP5.95□□□□□ -1.46
PRKD3-210ENST00000494667 ATP2B3Q16720 1220 aa5.94□□□□□ -1.46
PRKD3-210ENST00000494667 ZSCAN23Q3MJ62 389 aa5.94□□□□□ -1.46
PRKD3-210ENST00000494667 CDCA8Q53HL2 280 aa5.94□□□□□ -1.46
PRKD3-210ENST00000494667 LRSAM1Q6UWE0 723 aa5.94□□□□□ -1.46
PRKD3-210ENST00000494667 ATAD2Q6PL18 1390 aa5.94□□□□□ -1.46
PRKD3-210ENST00000494667 FANCD2Q9BXW9 1451 aa5.94□□□□□ -1.46
PRKD3-210ENST00000494667 GPATCH8Q9UKJ3 1502 aaKnown RBP5.94□□□□□ -1.46
PRKD3-210ENST00000494667 ADAMTS12P58397 1594 aa5.94□□□□□ -1.46
PRKD3-210ENST00000494667 BAG4O95429 457 aaKnown RBP5.94□□□□□ -1.46
PRKD3-210ENST00000494667 CCDC27Q2M243 656 aa5.94□□□□□ -1.46
PRKD3-210ENST00000494667 AMER1Q5JTC6 1135 aaPredicted RBP5.94□□□□□ -1.46
PRKD3-210ENST00000494667 CHMP4BQ9H444 224 aaKnown RBP5.94□□□□□ -1.46
PRKD3-210ENST00000494667 PANK3Q9H999 370 aa5.94□□□□□ -1.46
PRKD3-210ENST00000494667 LMBRD1Q9NUN5 540 aa5.94□□□□□ -1.46
PRKD3-210ENST00000494667 MED14O60244 1454 aa5.94□□□□□ -1.46
PRKD3-210ENST00000494667 NUP153P49790 1475 aaKnown RBP5.94□□□□□ -1.46
PRKD3-210ENST00000494667 XPCQ01831 940 aaPredicted RBP5.94□□□□□ -1.46
PRKD3-210ENST00000494667 ARXQ96QS3 562 aa5.94□□□□□ -1.46
PRKD3-210ENST00000494667 RBSNQ9H1K0 784 aa5.94□□□□□ -1.46
PRKD3-210ENST00000494667 KIF3AQ9Y496 699 aa5.94□□□□□ -1.46
PRKD3-210ENST00000494667 TROQ12816 1431 aaPredicted RBP5.93□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms