RNA–Protein interactions for RNA: ENST00000494649.5

APTX-230, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 2,099 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-230ENST00000494649 KNDC1Q76NI1 1749 aa15.87■□□□□ 0.13
APTX-230ENST00000494649 KIAA1210Q9ULL0 1709 aa15.86■□□□□ 0.13
APTX-230ENST00000494649 CARD11Q9BXL7 1154 aa15.85■□□□□ 0.13
APTX-230ENST00000494649 SLAIN2Q9P270 581 aa15.85■□□□□ 0.13
APTX-230ENST00000494649 CADPS2Q86UW7 1296 aa15.85■□□□□ 0.13
APTX-230ENST00000494649 NCOA3Q9Y6Q9 1424 aa15.84■□□□□ 0.13
APTX-230ENST00000494649 ARHGEF28Q8N1W1 1705 aaKnown RBP15.84■□□□□ 0.13
APTX-230ENST00000494649 FAM135BQ49AJ0 1406 aa15.83■□□□□ 0.13
APTX-230ENST00000494649 DLC1Q96QB1 1528 aa15.82■□□□□ 0.12
APTX-230ENST00000494649 RALGAPBQ86X10 1494 aa15.82■□□□□ 0.12
APTX-230ENST00000494649 DDX17Q92841 729 aaKnown RBP15.8■□□□□ 0.12
APTX-230ENST00000494649 SIRT1Q96EB6 747 aa15.8■□□□□ 0.12
APTX-230ENST00000494649 TIMELESSQ9UNS1 1208 aa15.8■□□□□ 0.12
APTX-230ENST00000494649 MST1RQ04912 1400 aa15.8■□□□□ 0.12
APTX-230ENST00000494649 ORAI2Q96SN7 254 aa15.8■□□□□ 0.12
APTX-230ENST00000494649 HSPA1LP34931 641 aa15.79■□□□□ 0.12
APTX-230ENST00000494649 ROBO1Q9Y6N7 1651 aa15.79■□□□□ 0.12
APTX-230ENST00000494649 CENPJQ9HC77 1338 aaPredicted RBP15.79■□□□□ 0.12
APTX-230ENST00000494649 DCCP43146 1447 aa15.78■□□□□ 0.12
APTX-230ENST00000494649 BRINP3Q76B58 766 aa15.78■□□□□ 0.12
APTX-230ENST00000494649 ESCO1Q5FWF5 840 aa15.77■□□□□ 0.12
APTX-230ENST00000494649 GPRASP1Q5JY77 1395 aa15.77■□□□□ 0.12
APTX-230ENST00000494649 DISP3Q9P2K9 1392 aa15.77■□□□□ 0.12
APTX-230ENST00000494649 CDC42BPGQ6DT37 1551 aa15.77■□□□□ 0.11
APTX-230ENST00000494649 C1orf167Q5SNV9 1468 aa15.76■□□□□ 0.11
APTX-230ENST00000494649 QRICH2Q9H0J4 1663 aa15.75■□□□□ 0.11
APTX-230ENST00000494649 WASLO00401 505 aaPredicted RBP15.74■□□□□ 0.11
APTX-230ENST00000494649 XPCQ01831 940 aaPredicted RBP15.74■□□□□ 0.11
APTX-230ENST00000494649 EIF3AQ14152 1382 aaKnown RBP15.74■□□□□ 0.11
APTX-230ENST00000494649 CDK19Q9BWU1 502 aa15.74■□□□□ 0.11
APTX-230ENST00000494649 ST20-MTHFSA0A0A6YYL1 179 aa15.73■□□□□ 0.11
APTX-230ENST00000494649 PMFBP1Q8TBY8 1022 aa15.73■□□□□ 0.11
APTX-230ENST00000494649 CABP2Q9NPB3 220 aa15.73■□□□□ 0.11
APTX-230ENST00000494649 RGPD8O14715 1765 aaPredicted RBP15.73■□□□□ 0.11
APTX-230ENST00000494649 SRPK2P78362 688 aaKnown RBP15.72■□□□□ 0.11
APTX-230ENST00000494649 FMN2Q9NZ56 1722 aa15.72■□□□□ 0.11
APTX-230ENST00000494649 PRR36Q9H6K5 1346 aa15.72■□□□□ 0.11
APTX-230ENST00000494649 USP47Q96K76 1375 aa15.72■□□□□ 0.11
APTX-230ENST00000494649 FOXO3O43524 673 aa15.72■□□□□ 0.11
APTX-230ENST00000494649 ADGRB2O60241 1585 aa15.71■□□□□ 0.11
APTX-230ENST00000494649 USP32Q8NFA0 1604 aa15.69■□□□□ 0.1
APTX-230ENST00000494649 TULP4Q9NRJ4 1543 aa15.69■□□□□ 0.1
APTX-230ENST00000494649 NUDT16Q96DE0 195 aaKnown RBP15.69■□□□□ 0.1
APTX-230ENST00000494649 PHLPP1O60346 1717 aa15.68■□□□□ 0.1
APTX-230ENST00000494649 PLEKHG5O94827 1062 aa15.67■□□□□ 0.1
APTX-230ENST00000494649 PHF8Q9UPP1 1060 aa15.67■□□□□ 0.1
APTX-230ENST00000494649 ILDR2Q71H61 639 aa15.67■□□□□ 0.1
APTX-230ENST00000494649 EVC2Q86UK5 1308 aa15.66■□□□□ 0.1
APTX-230ENST00000494649 ATP7BP35670 1465 aa15.66■□□□□ 0.1
APTX-230ENST00000494649 TESK2Q96S53 571 aa15.65■□□□□ 0.1
APTX-230ENST00000494649 ANKARQ7Z5J8 1434 aa15.64■□□□□ 0.09
APTX-230ENST00000494649 HSPA5P11021 654 aaKnown RBP15.64■□□□□ 0.09
APTX-230ENST00000494649 NGDNQ8NEJ9 315 aaKnown RBP15.63■□□□□ 0.09
APTX-230ENST00000494649 COL16A1Q07092 1604 aaPredicted RBP15.63■□□□□ 0.09
APTX-230ENST00000494649 CABP1Q9NZU7 370 aa15.63■□□□□ 0.09
APTX-230ENST00000494649 NHSL1Q5SYE7 1610 aa15.63■□□□□ 0.09
APTX-230ENST00000494649 AHDC1Q5TGY3 1603 aaPredicted RBP15.63■□□□□ 0.09
APTX-230ENST00000494649 NPHP3Q7Z494 1330 aa15.62■□□□□ 0.09
APTX-230ENST00000494649 EIF4G2P78344 907 aaKnown RBP eCLIP15.62■□□□□ 0.09
APTX-230ENST00000494649 PSME1Q06323 249 aa15.62■□□□□ 0.09
APTX-230ENST00000494649 LMOD2Q6P5Q4 547 aa15.62■□□□□ 0.09
APTX-230ENST00000494649 POLR3GLQ9BT43 218 aa15.62■□□□□ 0.09
APTX-230ENST00000494649 CCDC61Q9Y6R9 512 aa15.62■□□□□ 0.09
APTX-230ENST00000494649 PPIP5K1Q6PFW1 1433 aa15.62■□□□□ 0.09
APTX-230ENST00000494649 KRT28Q7Z3Y7 464 aa15.61■□□□□ 0.09
APTX-230ENST00000494649 TMC1Q8TDI8 760 aa15.61■□□□□ 0.09
APTX-230ENST00000494649 ACEP12821 1306 aa15.6■□□□□ 0.09
APTX-230ENST00000494649 PAK3O75914 559 aaPredicted RBP15.59■□□□□ 0.09
APTX-230ENST00000494649 SBNO2Q9Y2G9 1366 aa15.59■□□□□ 0.09
APTX-230ENST00000494649 SOS2Q07890 1332 aaPredicted RBP15.59■□□□□ 0.09
APTX-230ENST00000494649 KIF1AQ12756 1690 aa15.59■□□□□ 0.09
APTX-230ENST00000494649 PXDNQ92626 1479 aa15.59■□□□□ 0.09
APTX-230ENST00000494649 NUTM2BA6NNL0 878 aaPredicted RBP15.59■□□□□ 0.09
APTX-230ENST00000494649 NUTM2EB1AL46 878 aaPredicted RBP15.59■□□□□ 0.09
APTX-230ENST00000494649 NUTM2AQ8IVF1 878 aaPredicted RBP15.59■□□□□ 0.09
APTX-230ENST00000494649 LRRC59Q96AG4 307 aaKnown RBP15.58■□□□□ 0.09
APTX-230ENST00000494649 TMF1P82094 1093 aa15.58■□□□□ 0.08
APTX-230ENST00000494649 TOPAZ1Q8N9V7 1692 aa15.58■□□□□ 0.08
APTX-230ENST00000494649 ITSN1Q15811 1721 aa15.57■□□□□ 0.08
APTX-230ENST00000494649 SLC12A5Q9H2X9 1139 aa15.57■□□□□ 0.08
APTX-230ENST00000494649 JCADQ9P266 1359 aa15.57■□□□□ 0.08
APTX-230ENST00000494649 NUTM2GQ5VZR2 741 aa15.56■□□□□ 0.08
APTX-230ENST00000494649 ATAD2Q6PL18 1390 aa15.55■□□□□ 0.08
APTX-230ENST00000494649 PLEKHG3A1L390 1219 aa15.55■□□□□ 0.08
APTX-230ENST00000494649 CABLES1Q8TDN4 633 aa15.55■□□□□ 0.08
APTX-230ENST00000494649 PNPLA6Q8IY17 1366 aa15.54■□□□□ 0.08
APTX-230ENST00000494649 C11orf95C9JLR9 678 aaPredicted RBP15.53■□□□□ 0.08
APTX-230ENST00000494649 SPATA31A3Q5VYP0 1347 aa15.53■□□□□ 0.08
APTX-230ENST00000494649 POLR3AO14802 1390 aaPredicted RBP15.53■□□□□ 0.08
APTX-230ENST00000494649 ADAMTS2O95450 1211 aa15.52■□□□□ 0.08
APTX-230ENST00000494649 SOCS7O14512 581 aa15.52■□□□□ 0.07
APTX-230ENST00000494649 TNS3Q68CZ2 1445 aa15.51■□□□□ 0.07
APTX-230ENST00000494649 LRP6O75581 1613 aa15.5■□□□□ 0.07
APTX-230ENST00000494649 MEX3CQ5U5Q3 659 aaKnown RBP15.5■□□□□ 0.07
APTX-230ENST00000494649 SUGP2Q8IX01 1082 aaKnown RBP eCLIP15.5■□□□□ 0.072e-6■■■□□ 17.9
APTX-230ENST00000494649 SHPRHQ149N8 1683 aa15.5■□□□□ 0.07
APTX-230ENST00000494649 MED1Q15648 1581 aaPredicted RBP15.49■□□□□ 0.07
APTX-230ENST00000494649 TRPM3Q9HCF6 1732 aaPredicted RBP15.49■□□□□ 0.07
APTX-230ENST00000494649 HAP1P54257 671 aaPredicted RBP15.49■□□□□ 0.07
APTX-230ENST00000494649 USP6P35125 1406 aa15.49■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 102.2 ms