RNA–Protein interactions for RNA: ENST00000494467.1

ABCA1-204, Transcript of ATP binding cassette subfamily A member 1, humanhuman

TSL 3

Gene ABCA1, Length 807 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA1-204ENST00000494467 C11orf95C9JLR9 678 aaPredicted RBP12.92□□□□□ -0.34
ABCA1-204ENST00000494467 PRAM1Q96QH2 718 aa12.92□□□□□ -0.34
ABCA1-204ENST00000494467 XIRP1Q702N8 1843 aaKnown RBP12.92□□□□□ -0.34
ABCA1-204ENST00000494467 KIF7Q2M1P5 1343 aa12.91□□□□□ -0.34
ABCA1-204ENST00000494467 WASHC2AQ641Q2 1341 aa12.91□□□□□ -0.34
ABCA1-204ENST00000494467 CDC42BPGQ6DT37 1551 aa12.91□□□□□ -0.34
ABCA1-204ENST00000494467 DISP3Q9P2K9 1392 aa12.91□□□□□ -0.34
ABCA1-204ENST00000494467 NALCNQ8IZF0 1738 aa12.91□□□□□ -0.34
ABCA1-204ENST00000494467 STK26Q9P289 416 aa12.9□□□□□ -0.34
ABCA1-204ENST00000494467 PLEKHH1Q9ULM0 1364 aa12.9□□□□□ -0.34
ABCA1-204ENST00000494467 EVC2Q86UK5 1308 aa12.89□□□□□ -0.35
ABCA1-204ENST00000494467 FMN2Q9NZ56 1722 aa12.89□□□□□ -0.35
ABCA1-204ENST00000494467 POGKQ9P215 609 aa12.89□□□□□ -0.35
ABCA1-204ENST00000494467 NINLQ9Y2I6 1382 aa12.89□□□□□ -0.35
ABCA1-204ENST00000494467 TOPAZ1Q8N9V7 1692 aa12.89□□□□□ -0.35
ABCA1-204ENST00000494467 HIRIP3Q9BW71 556 aaPredicted RBP12.88□□□□□ -0.35
ABCA1-204ENST00000494467 ITSN1Q15811 1721 aa12.88□□□□□ -0.35
ABCA1-204ENST00000494467 DCCP43146 1447 aa12.88□□□□□ -0.35
ABCA1-204ENST00000494467 ADGRL3Q9HAR2 1447 aa12.88□□□□□ -0.35
ABCA1-204ENST00000494467 WAPLQ7Z5K2 1190 aa12.87□□□□□ -0.35
ABCA1-204ENST00000494467 ATAD2Q6PL18 1390 aa12.86□□□□□ -0.35
ABCA1-204ENST00000494467 ANKARQ7Z5J8 1434 aa12.86□□□□□ -0.35
ABCA1-204ENST00000494467 USP32Q8NFA0 1604 aa12.85□□□□□ -0.35
ABCA1-204ENST00000494467 WASLO00401 505 aaPredicted RBP12.85□□□□□ -0.35
ABCA1-204ENST00000494467 LTBP4Q8N2S1 1624 aa12.84□□□□□ -0.35
ABCA1-204ENST00000494467 LRRC7Q96NW7 1537 aa12.84□□□□□ -0.35
ABCA1-204ENST00000494467 RGPD8O14715 1765 aaPredicted RBP12.84□□□□□ -0.35
ABCA1-204ENST00000494467 AKAP12Q02952 1782 aa12.84□□□□□ -0.35
ABCA1-204ENST00000494467 SENP3Q9H4L4 574 aaPredicted RBP12.83□□□□□ -0.36
ABCA1-204ENST00000494467 ATP7BP35670 1465 aa12.83□□□□□ -0.36
ABCA1-204ENST00000494467 CDK19Q9BWU1 502 aa12.82□□□□□ -0.36
ABCA1-204ENST00000494467 MINK1Q8N4C8 1332 aaPredicted RBP12.82□□□□□ -0.36
ABCA1-204ENST00000494467 MON2Q7Z3U7 1717 aa12.81□□□□□ -0.36
ABCA1-204ENST00000494467 PROSER2Q86WR7 435 aaPredicted RBP12.8□□□□□ -0.36
ABCA1-204ENST00000494467 C19orf44Q9H6X5 657 aa12.8□□□□□ -0.36
ABCA1-204ENST00000494467 TMEM94Q12767 1356 aa12.8□□□□□ -0.36
ABCA1-204ENST00000494467 CD163L1Q9NR16 1453 aa12.79□□□□□ -0.36
ABCA1-204ENST00000494467 ZNF335Q9H4Z2 1342 aaPredicted RBP12.79□□□□□ -0.36
ABCA1-204ENST00000494467 ANKRD36BQ8N2N9 1353 aa12.79□□□□□ -0.36
ABCA1-204ENST00000494467 NPC1L1Q9UHC9 1359 aa12.79□□□□□ -0.36
ABCA1-204ENST00000494467 CPSF1Q10570 1443 aaKnown RBP12.79□□□□□ -0.36
ABCA1-204ENST00000494467 PLEKHG3A1L390 1219 aa12.78□□□□□ -0.36
ABCA1-204ENST00000494467 PER1O15534 1290 aaPredicted RBP12.78□□□□□ -0.36
ABCA1-204ENST00000494467 SAFB2Q14151 953 aaKnown RBP eCLIP12.78□□□□□ -0.36
ABCA1-204ENST00000494467 CCDC61Q9Y6R9 512 aa12.78□□□□□ -0.36
ABCA1-204ENST00000494467 IQSEC2Q5JU85 1478 aa12.78□□□□□ -0.36
ABCA1-204ENST00000494467 KIF1AQ12756 1690 aa12.77□□□□□ -0.36
ABCA1-204ENST00000494467 DDX10Q13206 875 aaKnown RBP12.77□□□□□ -0.37
ABCA1-204ENST00000494467 PRR36Q9H6K5 1346 aa12.77□□□□□ -0.37
ABCA1-204ENST00000494467 POLR3AO14802 1390 aaPredicted RBP12.77□□□□□ -0.37
ABCA1-204ENST00000494467 SRPK2P78362 688 aaKnown RBP12.76□□□□□ -0.37
ABCA1-204ENST00000494467 NUDT16Q96DE0 195 aaKnown RBP12.76□□□□□ -0.37
ABCA1-204ENST00000494467 CABP2Q9NPB3 220 aa12.76□□□□□ -0.37
ABCA1-204ENST00000494467 BRD4O60885 1362 aaPredicted RBP12.76□□□□□ -0.37
ABCA1-204ENST00000494467 NRKQ7Z2Y5 1582 aa12.76□□□□□ -0.37
ABCA1-204ENST00000494467 ANKRD26Q9UPS8 1709 aa12.76□□□□□ -0.37
ABCA1-204ENST00000494467 DIEXFQ68CQ4 756 aaKnown RBP12.75□□□□□ -0.37
ABCA1-204ENST00000494467 KTN1Q86UP2 1357 aaKnown RBP12.75□□□□□ -0.37
ABCA1-204ENST00000494467 USP54Q70EL1 1684 aa12.74□□□□□ -0.37
ABCA1-204ENST00000494467 MST1RQ04912 1400 aa12.74□□□□□ -0.37
ABCA1-204ENST00000494467 PPIP5K1Q6PFW1 1433 aa12.74□□□□□ -0.37
ABCA1-204ENST00000494467 MSH6P52701 1360 aa12.74□□□□□ -0.37
ABCA1-204ENST00000494467 CADPS2Q86UW7 1296 aa12.74□□□□□ -0.37
ABCA1-204ENST00000494467 SLC12A5Q9H2X9 1139 aa12.74□□□□□ -0.37
ABCA1-204ENST00000494467 C1orf167Q5SNV9 1468 aa12.73□□□□□ -0.37
ABCA1-204ENST00000494467 ZNF692Q9BU19 519 aaPredicted RBP12.73□□□□□ -0.37
ABCA1-204ENST00000494467 PANK3Q9H999 370 aa12.73□□□□□ -0.37
ABCA1-204ENST00000494467 TERF2IPQ9NYB0 399 aa12.73□□□□□ -0.37
ABCA1-204ENST00000494467 SSH2Q76I76 1423 aa12.72□□□□□ -0.37
ABCA1-204ENST00000494467 KIF20BQ96Q89 1820 aa12.72□□□□□ -0.37
ABCA1-204ENST00000494467 EDC4Q6P2E9 1401 aaKnown RBP12.71□□□□□ -0.37
ABCA1-204ENST00000494467 A0A1W2PP64 1363 aa12.71□□□□□ -0.37
ABCA1-204ENST00000494467 CARD14Q9BXL6 1004 aa12.71□□□□□ -0.37
ABCA1-204ENST00000494467 CABP1Q9NZU7 370 aa12.71□□□□□ -0.37
ABCA1-204ENST00000494467 NSD2O96028 1365 aa12.7□□□□□ -0.38
ABCA1-204ENST00000494467 AMER1Q5JTC6 1135 aaPredicted RBP12.7□□□□□ -0.38
ABCA1-204ENST00000494467 TRPM3Q9HCF6 1732 aaPredicted RBP12.69□□□□□ -0.38
ABCA1-204ENST00000494467 ATF3P18847 181 aa12.69□□□□□ -0.38
ABCA1-204ENST00000494467 USP6P35125 1406 aa12.69□□□□□ -0.38
ABCA1-204ENST00000494467 HDGFL2Q7Z4V5 671 aaPredicted RBP12.68□□□□□ -0.38
ABCA1-204ENST00000494467 NHSL1Q5SYE7 1610 aa12.68□□□□□ -0.38
ABCA1-204ENST00000494467 PARD3Q8TEW0 1356 aa12.68□□□□□ -0.38
ABCA1-204ENST00000494467 ACEP12821 1306 aa12.67□□□□□ -0.38
ABCA1-204ENST00000494467 C14orf37Q86TY3 774 aa12.67□□□□□ -0.38
ABCA1-204ENST00000494467 TMC1Q8TDI8 760 aa12.67□□□□□ -0.38
ABCA1-204ENST00000494467 RBM33Q96EV2 1170 aaKnown RBP12.67□□□□□ -0.38
ABCA1-204ENST00000494467 POLR3GLQ9BT43 218 aa12.67□□□□□ -0.38
ABCA1-204ENST00000494467 KNSTRNQ9Y448 316 aa12.67□□□□□ -0.38
ABCA1-204ENST00000494467 NSD3Q9BZ95 1437 aa12.67□□□□□ -0.38
ABCA1-204ENST00000494467 CGNL1Q0VF96 1302 aa12.66□□□□□ -0.38
ABCA1-204ENST00000494467 MARF1Q9Y4F3 1742 aaKnown RBP12.66□□□□□ -0.38
ABCA1-204ENST00000494467 PHF8Q9UPP1 1060 aa12.66□□□□□ -0.38
ABCA1-204ENST00000494467 TTC21AQ8NDW8 1320 aa12.65□□□□□ -0.38
ABCA1-204ENST00000494467 ALS2Q96Q42 1657 aa12.65□□□□□ -0.38
ABCA1-204ENST00000494467 RALBP1Q15311 655 aa12.65□□□□□ -0.38
ABCA1-204ENST00000494467 PRKRIP1Q9H875 184 aaPredicted RBP12.65□□□□□ -0.38
ABCA1-204ENST00000494467 USP31Q70CQ4 1352 aa12.65□□□□□ -0.38
ABCA1-204ENST00000494467 SLAIN2Q9P270 581 aa12.64□□□□□ -0.39
ABCA1-204ENST00000494467 PIK3C2AO00443 1686 aa12.64□□□□□ -0.39
ABCA1-204ENST00000494467 SCAF1Q9H7N4 1312 aaKnown RBP12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms