RNA–Protein interactions for RNA: ENST00000494043.1

MCF2L-231, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 3

Gene MCF2L, Length 896 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-231ENST00000494043 WAPLQ7Z5K2 1190 aa15.89■□□□□ 0.13
MCF2L-231ENST00000494043 TULP4Q9NRJ4 1543 aa15.89■□□□□ 0.13
MCF2L-231ENST00000494043 KCNA6P17658 529 aa15.88■□□□□ 0.13
MCF2L-231ENST00000494043 CDCA8Q53HL2 280 aa15.87■□□□□ 0.13
MCF2L-231ENST00000494043 NKTRP30414 1462 aaKnown RBP15.86■□□□□ 0.13
MCF2L-231ENST00000494043 MINK1Q8N4C8 1332 aaPredicted RBP15.86■□□□□ 0.13
MCF2L-231ENST00000494043 ADGRB2O60241 1585 aa15.85■□□□□ 0.13
MCF2L-231ENST00000494043 EVC2Q86UK5 1308 aa15.85■□□□□ 0.13
MCF2L-231ENST00000494043 POLR3GLQ9BT43 218 aa15.84■□□□□ 0.13
MCF2L-231ENST00000494043 SIPA1L2Q9P2F8 1722 aaPredicted RBP15.84■□□□□ 0.13
MCF2L-231ENST00000494043 DMRT2Q9Y5R5 561 aa15.83■□□□□ 0.12
MCF2L-231ENST00000494043 DDX10Q13206 875 aaKnown RBP15.82■□□□□ 0.12
MCF2L-231ENST00000494043 PUS7Q96PZ0 661 aaKnown RBP15.82■□□□□ 0.12
MCF2L-231ENST00000494043 STRCP1A6NGW2 1772 aa15.81■□□□□ 0.12
MCF2L-231ENST00000494043 DIEXFQ68CQ4 756 aaKnown RBP15.8■□□□□ 0.12
MCF2L-231ENST00000494043 MYOM1P52179 1685 aa15.79■□□□□ 0.12
MCF2L-231ENST00000494043 WASLO00401 505 aaPredicted RBP15.79■□□□□ 0.12
MCF2L-231ENST00000494043 CDK19Q9BWU1 502 aa15.79■□□□□ 0.12
MCF2L-231ENST00000494043 NALCNQ8IZF0 1738 aa15.79■□□□□ 0.12
MCF2L-231ENST00000494043 ADGRL3Q9HAR2 1447 aa15.78■□□□□ 0.12
MCF2L-231ENST00000494043 ATAD2Q6PL18 1390 aa15.78■□□□□ 0.12
MCF2L-231ENST00000494043 SRPK2P78362 688 aaKnown RBP15.78■□□□□ 0.12
MCF2L-231ENST00000494043 PROSER2Q86WR7 435 aaPredicted RBP15.77■□□□□ 0.12
MCF2L-231ENST00000494043 CABP2Q9NPB3 220 aa15.77■□□□□ 0.12
MCF2L-231ENST00000494043 CDC42BPGQ6DT37 1551 aa15.77■□□□□ 0.11
MCF2L-231ENST00000494043 ZNF335Q9H4Z2 1342 aaPredicted RBP15.76■□□□□ 0.11
MCF2L-231ENST00000494043 NCOA3Q9Y6Q9 1424 aa15.76■□□□□ 0.11
MCF2L-231ENST00000494043 TMEM94Q12767 1356 aa15.75■□□□□ 0.11
MCF2L-231ENST00000494043 NINLQ9Y2I6 1382 aa15.75■□□□□ 0.11
MCF2L-231ENST00000494043 ATP7BP35670 1465 aa15.74■□□□□ 0.11
MCF2L-231ENST00000494043 RBM33Q96EV2 1170 aaKnown RBP15.74■□□□□ 0.11
MCF2L-231ENST00000494043 FMN2Q9NZ56 1722 aa15.73■□□□□ 0.11
MCF2L-231ENST00000494043 LRRC7Q96NW7 1537 aa15.73■□□□□ 0.11
MCF2L-231ENST00000494043 ANKARQ7Z5J8 1434 aa15.72■□□□□ 0.11
MCF2L-231ENST00000494043 C14orf37Q86TY3 774 aa15.72■□□□□ 0.11
MCF2L-231ENST00000494043 PRR36Q9H6K5 1346 aa15.71■□□□□ 0.11
MCF2L-231ENST00000494043 TOPAZ1Q8N9V7 1692 aa15.71■□□□□ 0.11
MCF2L-231ENST00000494043 TMC1Q8TDI8 760 aa15.71■□□□□ 0.11
MCF2L-231ENST00000494043 NUDT16Q96DE0 195 aaKnown RBP15.71■□□□□ 0.11
MCF2L-231ENST00000494043 PANK3Q9H999 370 aa15.71■□□□□ 0.11
MCF2L-231ENST00000494043 USP32Q8NFA0 1604 aa15.71■□□□□ 0.11
MCF2L-231ENST00000494043 DCCP43146 1447 aa15.7■□□□□ 0.1
MCF2L-231ENST00000494043 SLC12A5Q9H2X9 1139 aa15.7■□□□□ 0.1
MCF2L-231ENST00000494043 PPIP5K1Q6PFW1 1433 aa15.69■□□□□ 0.1
MCF2L-231ENST00000494043 ANKRD36BQ8N2N9 1353 aa15.69■□□□□ 0.1
MCF2L-231ENST00000494043 XIRP1Q702N8 1843 aaKnown RBP15.68■□□□□ 0.1
MCF2L-231ENST00000494043 CD163L1Q9NR16 1453 aa15.68■□□□□ 0.1
MCF2L-231ENST00000494043 C19orf44Q9H6X5 657 aa15.68■□□□□ 0.1
MCF2L-231ENST00000494043 CCDC61Q9Y6R9 512 aa15.68■□□□□ 0.1
MCF2L-231ENST00000494043 ITSN1Q15811 1721 aa15.68■□□□□ 0.1
MCF2L-231ENST00000494043 NUTM2FA1L443 756 aa15.67■□□□□ 0.1
MCF2L-231ENST00000494043 CABP1Q9NZU7 370 aa15.67■□□□□ 0.1
MCF2L-231ENST00000494043 LTBP4Q8N2S1 1624 aa15.67■□□□□ 0.1
MCF2L-231ENST00000494043 A0A1W2PP64 1363 aa15.66■□□□□ 0.1
MCF2L-231ENST00000494043 MSH6P52701 1360 aa15.66■□□□□ 0.1
MCF2L-231ENST00000494043 PER1O15534 1290 aaPredicted RBP15.66■□□□□ 0.1
MCF2L-231ENST00000494043 TERF2IPQ9NYB0 399 aa15.65■□□□□ 0.1
MCF2L-231ENST00000494043 PLEKHG3A1L390 1219 aa15.64■□□□□ 0.09
MCF2L-231ENST00000494043 CARD14Q9BXL6 1004 aa15.64■□□□□ 0.09
MCF2L-231ENST00000494043 NSD3Q9BZ95 1437 aa15.64■□□□□ 0.09
MCF2L-231ENST00000494043 CPSF1Q10570 1443 aaKnown RBP15.63■□□□□ 0.09
MCF2L-231ENST00000494043 ATF3P18847 181 aa15.63■□□□□ 0.09
MCF2L-231ENST00000494043 HDGFL2Q7Z4V5 671 aaPredicted RBP15.63■□□□□ 0.09
MCF2L-231ENST00000494043 KNSTRNQ9Y448 316 aa15.63■□□□□ 0.09
MCF2L-231ENST00000494043 RGPD8O14715 1765 aaPredicted RBP15.62■□□□□ 0.09
MCF2L-231ENST00000494043 MST1RQ04912 1400 aa15.62■□□□□ 0.09
MCF2L-231ENST00000494043 ANP32CO43423 234 aa15.62■□□□□ 0.09
MCF2L-231ENST00000494043 CADPS2Q86UW7 1296 aa15.62■□□□□ 0.09
MCF2L-231ENST00000494043 C1orf167Q5SNV9 1468 aa15.62■□□□□ 0.09
MCF2L-231ENST00000494043 AKAP12Q02952 1782 aa15.62■□□□□ 0.09
MCF2L-231ENST00000494043 POLR3AO14802 1390 aaPredicted RBP15.61■□□□□ 0.09
MCF2L-231ENST00000494043 NPC1L1Q9UHC9 1359 aa15.61■□□□□ 0.09
MCF2L-231ENST00000494043 MON2Q7Z3U7 1717 aa15.6■□□□□ 0.09
MCF2L-231ENST00000494043 AMER1Q5JTC6 1135 aaPredicted RBP15.6■□□□□ 0.09
MCF2L-231ENST00000494043 ACEP12821 1306 aa15.6■□□□□ 0.09
MCF2L-231ENST00000494043 KTN1Q86UP2 1357 aaKnown RBP15.6■□□□□ 0.09
MCF2L-231ENST00000494043 EDC4Q6P2E9 1401 aaKnown RBP15.6■□□□□ 0.09
MCF2L-231ENST00000494043 MIER1Q8N108 512 aa15.59■□□□□ 0.09
MCF2L-231ENST00000494043 PMFBP1Q8TBY8 1022 aa15.58■□□□□ 0.08
MCF2L-231ENST00000494043 ZNF692Q9BU19 519 aaPredicted RBP15.58■□□□□ 0.08
MCF2L-231ENST00000494043 PRKRIP1Q9H875 184 aaPredicted RBP15.58■□□□□ 0.08
MCF2L-231ENST00000494043 PHF8Q9UPP1 1060 aa15.58■□□□□ 0.08
MCF2L-231ENST00000494043 CGNL1Q0VF96 1302 aa15.58■□□□□ 0.08
MCF2L-231ENST00000494043 USP6P35125 1406 aa15.58■□□□□ 0.08
MCF2L-231ENST00000494043 NRKQ7Z2Y5 1582 aa15.58■□□□□ 0.08
MCF2L-231ENST00000494043 KIF1AQ12756 1690 aa15.57■□□□□ 0.08
MCF2L-231ENST00000494043 ESCO1Q5FWF5 840 aa15.57■□□□□ 0.08
MCF2L-231ENST00000494043 NGDNQ8NEJ9 315 aaKnown RBP15.56■□□□□ 0.08
MCF2L-231ENST00000494043 ORAI2Q96SN7 254 aa15.56■□□□□ 0.08
MCF2L-231ENST00000494043 NSD2O96028 1365 aa15.56■□□□□ 0.08
MCF2L-231ENST00000494043 PARD3Q8TEW0 1356 aa15.56■□□□□ 0.08
MCF2L-231ENST00000494043 CC2D1BQ5T0F9 858 aaKnown RBP15.55■□□□□ 0.08
MCF2L-231ENST00000494043 SSH2Q76I76 1423 aa15.54■□□□□ 0.08
MCF2L-231ENST00000494043 CNGB1Q14028 1251 aaPredicted RBP15.54■□□□□ 0.08
MCF2L-231ENST00000494043 RALBP1Q15311 655 aa15.54■□□□□ 0.08
MCF2L-231ENST00000494043 KIF20BQ96Q89 1820 aa15.53■□□□□ 0.08
MCF2L-231ENST00000494043 BRD4O60885 1362 aaPredicted RBP15.52■□□□□ 0.08
MCF2L-231ENST00000494043 TTC21BQ7Z4L5 1316 aa15.52■□□□□ 0.08
MCF2L-231ENST00000494043 SUGP2Q8IX01 1082 aaKnown RBP eCLIP15.52■□□□□ 0.08
MCF2L-231ENST00000494043 SLAIN2Q9P270 581 aa15.52■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 987.6 ms